FFCP PHASE1:Mm9::chr6:124881517..124881557,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:124881517..124881557,+ to FFCP PHASE1:Mm9::chr6:124881517..124881557,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30853 | |EntrezGene=30853 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3079 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KX1,Q3UNV7 | |UniProt=Q99KX1,Q3UNV7 | ||
|association_with_transcript=111bp_to_ENSMUST00000032214,NM_001170341,NM_145385,uc009dso.2,uc009dsp.2,uc009dsq.2_5end | |||
|cluster_id=chr6:124881517..124881557,+ | |||
|description=CAGE_peak_3_at_Mlf2_5end | |||
|id=chr6:124881517..124881557,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.85e-07!50;CL:0002321!2.01e-07!70;CL:0000220!2.01e-07!70;CL:0002453!9.63e-07!8;CL:0000333!9.83e-07!10;CL:0000095!9.83e-07!10;CL:0000243!9.83e-07!10;CL:0000123!9.83e-07!10;CL:0000125!9.83e-07!10;CL:0000030!9.83e-07!10;CL:0000339!9.83e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.01e-07,70;CL:0002453,9.63e-07,8;CL:0000333,9.83e-07,10;CL:0000095,9.83e-07,10;CL:0000243,9.83e-07,10;CL:0000123,9.83e-07,10;CL:0000125,9.83e-07,10;CL:0000030,9.83e-07,10;CL:0000339,9.83e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!7.91e-13!122;UBERON:0000025!9.52e-13!114;UBERON:0000073!4.50e-11!75;UBERON:0001016!4.50e-11!75;UBERON:0001017!1.06e-10!73;UBERON:0005743!1.06e-10!73;UBERON:0004121!6.03e-08!102;UBERON:0000924!6.03e-08!102;UBERON:0006601!6.03e-08!102;UBERON:0003103!9.11e-08!43;UBERON:0001049!5.24e-07!52;UBERON:0005068!5.24e-07!52;UBERON:0006241!5.24e-07!52;UBERON:0007135!5.24e-07!52;UBERON:0004535!6.19e-07!23;UBERON:0001009!6.19e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,7.91e-13,122;UBERON:0000025,9.52e-13,114;UBERON:0001016,4.50e-11,75;UBERON:0001017,1.06e-10,73;UBERON:0010314,3.18e-09,92;UBERON:0004121,7.00e-08,95;UBERON:0000924,7.00e-08,95;UBERON:0006601,7.00e-08,95;UBERON:0003103,9.11e-08,43;UBERON:0000073,1.77e-07,54;UBERON:0001049,5.24e-07,52;UBERON:0005068,5.24e-07,52;UBERON:0006241,5.24e-07,52;UBERON:0007135,5.24e-07,52;UBERON:0004535,6.19e-07,23;UBERON:0001009,6.19e-07,23 | |||
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| |phase1_expression=20.4990524294136,27.9180326111489,30.0299497997094,39.6228116811947,37.0662840160297,14.2697381125106,16.8201101228778,16.0112921067555,9.01047821770667,11.7032263160997,12.3276937122364,15.5555710040906,10.4432445258036,13.1130603628496,6.99530499812892,7.28910962603373,16.7894850750755,7.5710919685977,5.21034847701807,7.63901373236454,25.2578571748677,14.7943517289319,18.8063848180033,23.198901305044,29.3643879765978,29.860062133981,30.5841017272943,23.0554218973901,44.2754567333351,28.2273745331122,28.8249663851896,8.89042942843484,17.221814052368,0,9.82095507154334,11.802659820453,10.4126371693808,4.18531630736908,5.4693474116666,4.71171369576418,4.70585190424811,5.46436387966757,4.85510353031154,38.7762199364778,41.76729566244,31.7535881239709,112.664353586118,72.6023770746887,74.6933021297204,76.4109503361934,53.3348266392631,57.5010257459886,5.20126078778983,9.42970784614748,13.779845764841,51.9664060792613,36.1032134322833,47.9575045818021,26.9080892943265,21.1596391708813,36.7622214033584,73.1904189269325,59.5827513394463,33.7462393980525,42.5212535903799,54.7069688508497,83.2888307241165,121.797202786933,12.4427534770173,9.99043943654511,6.94072372459561,69.9844911789319,62.7266656302582,14.2089327089347,13.5142114135713,11.9498442259303,44.0463523997555,39.5830748064082,39.0160594470858,25.0583946687368,25.8910031394819,20.8365348222704,46.6235608332306,42.7699583624077,35.7547899797736,42.7211448936818,36.8742653269677,29.6375118862228,28.7759534666099,36.4254919714706,19.1310562543107,50.7650087419018,52.3577926954968,39.9380361811985,51.9821133958135,34.4980703064948,44.5208811817653,47.8909206444342,53.515916948191,56.8876714961648,30.422178671763,28.2318250311499,30.5766287647975,49.7746692207332,28.360326372469,24.8292668165597,26.2872711407687,34.4835316751561,8.54495016035667,33.3994812895856,21.8591511725331,23.1393763517227,23.753396217374,23.964899847867,25.3991607413122,27.0183171358802,26.6970565153124,45.6933967866921,18.5768215909474,29.9268672402707,33.7887523244402,20.8496358848145,20.5030937339934,39.8181883935704,38.5381940536757,31.6766748458653,7.18890747035522,11.3981518888747,5.46401976414178,61.4141621559773,74.1150976566175,29.7800814507489,44.6728502894151,45.5173514047988,54.0248915854856,42.0204871345492,25.76535905413,21.6468128861562,19.9650979162603,16.8353484709179,16.1349349273753,16.5529515192101,16.5657159420921,15.6733010549144,19.5264752564311,13.3238269096244,15.8355914505942,28.9747775227698,16.5987354558289,16.8304411349359,15.8356011747554,21.0427903130472,14.7365042089567,20.1986256582857,22.6360350048738,12.1410902759281,9.83098462238529,7.46308930632674,7.672414483681,30.6546143352543,24.390710238034,26.1089989118472,30.5400708904921,36.7949113367645,32.2418265934621,31.6246164860555,42.3871974211398,41.4516965403452,31.7600510333017,35.9526746333219,49.1276985847886,49.1231957749117,47.2032747875759,50.3274070351394,44.1608891984667,15.8473103064098,46.2586296177317,29.618463466317,17.9162130449597,16.0243303583703,22.5518057313663,23.1936053316844,20.9035361214178,25.6804595251955,32.7425052465713,29.97520975977,19.604146286421,27.0580801975965,25.5402954126047,37.7504151634773,21.3976669375947,30.0703322614094,28.4501851429623,16.3375373031912,27.0498565615393,19.3468761453049,25.407775818959,26.862019017992,24.5990129413361,37.4929775868189,37.3656972262472,41.5848442416468,56.3259991465583,15.0160595144485,15.528160613943,17.0895205412489,17.6488305607998,18.0882869814313,17.0599320693551,22.1526025837124,25.4552306036806,18.1210532704134,12.9391385874619,36.0976719238448,26.2111645416231,44.2013036407446,27.6272016823745,56.9283355208773,30.6690295676564,20.6545638829828,17.7631824321808,15.7862929770925,20.8874320976767,21.2732946951106,26.4228441383475,30.8311163615322,25.5368933452029,27.4616215164481,27.1073106717728,24.5794972073607,27.9749670622751,28.9298117163023,15.0791283939272,18.4927932498361,20.1623351937805,24.0064969285117,48.1651769963376,43.9543824720762,39.8361917265321,71.4492723988376,31.2353137222094,28.8924670779512,26.7125013188671,31.0659437338318,28.9638276307112,22.0799694015289,27.1223170122179,23.380468632905,26.8795689003636,71.9759748784848,27.5363765304041,20.1214132143998,26.5505743746329,30.3545026269465,33.1862845849907,17.7229864393136,16.6277956330613,21.6895841719283,34.8456233599312,23.3650712437385,24.8091161441492,21.4484900391728,18.1813662976208,25.5989773928011,29.5172104009997,28.8779521094923,16.6815406819356,13.5045820523483,24.3194325511578,19.2903331528433,20.0394464015769,20.155676389034,23.8596079873075,38.6670485375541,18.5390649370331,10.591603543191,22.7144249996611,19.7863503529776,28.4177390984794,19.6620135265788,23.7550964566242,23.3080077637987,28.8566028263552,57.481843623258,10.0813819670733,17.1301100409475,10.0005044779644,6.40452753815949,9.97867862363484,8.00723606222829,12.2384469595576,12.1757763521582,8.43019840206985,42.9601778106801,17.3984796469624,20.73858564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| ||
|short_description=p3@Mlf2 | |||
}} | }} |
Latest revision as of 16:33, 26 September 2015
Short description: | p3@Mlf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mlf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3079 |
Association with transcript: | 111bp_to_ENSMUST00000032214, NM_001170341, NM_145385, uc009dso.2, uc009dsp.2, uc009dsq.2_5end |
EntrezGene: | Mlf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.01e-07 | 70 |
oligodendrocyte precursor cell | 9.63e-07 | 8 |
migratory neural crest cell | 9.83e-07 | 10 |
neuron associated cell | 9.83e-07 | 10 |
glial cell (sensu Vertebrata) | 9.83e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.83e-07 | 10 |
glial cell | 9.83e-07 | 10 |
glioblast | 9.83e-07 | 10 |
glioblast (sensu Vertebrata) | 9.83e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 7.91e-13 | 122 |
tube | 9.52e-13 | 114 |
nervous system | 4.50e-11 | 75 |
central nervous system | 1.06e-10 | 73 |
structure with developmental contribution from neural crest | 3.18e-09 | 92 |
ectoderm-derived structure | 7.00e-08 | 95 |
ectoderm | 7.00e-08 | 95 |
presumptive ectoderm | 7.00e-08 | 95 |
compound organ | 9.11e-08 | 43 |
regional part of nervous system | 1.77e-07 | 54 |
neural tube | 5.24e-07 | 52 |
neural rod | 5.24e-07 | 52 |
future spinal cord | 5.24e-07 | 52 |
neural keel | 5.24e-07 | 52 |
cardiovascular system | 6.19e-07 | 23 |
circulatory system | 6.19e-07 | 23 |