Personal tools

FFCP PHASE1:Mm9::chr11:103815329..103815348,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18195
|EntrezGene=18195
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000107009,ENSMUST00000145126_5end
|association_with_transcript=0bp_to_ENSMUST00000107009,ENSMUST00000145126_5end
|cluster_id=chr11:103815329..103815348,-
|description=CAGE_peak_1_at_Nsf_5end
|description=CAGE_peak_1_at_Nsf_5end
|id=chr11:103815329..103815348,-
|id=chr11:103815329..103815348,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.99e-09!71;UBERON:0003075!1.99e-09!71;UBERON:0007284!1.99e-09!71;UBERON:0001049!2.26e-09!52;UBERON:0005068!2.26e-09!52;UBERON:0006241!2.26e-09!52;UBERON:0007135!2.26e-09!52;UBERON:0000955!1.24e-08!50;UBERON:0006238!1.24e-08!50;UBERON:0007811!1.92e-08!86;UBERON:0002616!3.54e-08!49;UBERON:0002020!4.73e-08!34;UBERON:0000153!6.10e-08!94;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10;UBERON:0000033!2.73e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-10,54;UBERON:0001049,2.26e-09,52;UBERON:0005068,2.26e-09,52;UBERON:0006241,2.26e-09,52;UBERON:0007135,2.26e-09,52;UBERON:0002020,4.73e-08,34;UBERON:0002346,5.00e-08,64;UBERON:0003075,5.00e-08,64;UBERON:0007284,5.00e-08,64;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0000955,3.18e-07,47;UBERON:0006238,3.18e-07,47;UBERON:0010371,8.05e-07,73;UBERON:0002616,8.49e-07,46
|phase1_expression=18.7374151112609,46.0647538083957,47.7749201359013,27.8267074402284,23.5420993074783,27.0285627778143,27.099066309081,26.4702813055231,28.8616880410917,31.3646465271471,24.3129514880217,25.9259516734843,38.8625656943837,39.1643402837108,31.3123176106723,37.0529739323381,27.9824751251259,69.4016763788123,67.734530201235,64.0828374215026,109.620801004729,21.4468454593912,28.470777016144,31.5185072903011,23.1703373877842,42.4931653445115,37.9070556619986,44.1716027006073,28.1234660795433,26.2111334950328,52.5501310253072,38.7368710810375,30.1381745916439,0,12.9983228888074,13.2987716286794,15.1085323634153,42.2716947044277,35.9414258480948,38.7407570540611,32.9409633297368,38.250547157673,33.5002143591496,22.031943145726,22.3029248682932,27.8991063285756,5.47673941043627,10.9012578190223,12.9614847813338,15.3599620268684,24.2176509411877,15.8127820801469,80.8712161198289,32.6412963905105,36.6342241065286,18.0081605225163,20.3438742356517,19.0798674142654,58.2671407275642,78.8196559115329,70.9891171926921,14.5703148789727,14.2287167377782,16.6481447697059,12.8552627133707,12.0781619540837,8.68840320503374,8.06858441175265,19.3899575016853,16.8757422914613,12.8298226424343,149.109813858785,159.246218026113,24.4981598429908,30.0954778997262,18.3843757322004,305.020990368307,472.953900267535,423.339605654207,60.9314649313496,90.0238413047711,65.6350846901518,410.119825533029,267.312239765048,348.22720668335,139.064692343571,159.313910814196,91.7085273460479,28.7002272732768,34.2339167283738,29.2763133588695,13.7667820317022,4.0798280022465,12.4131734076698,10.3964226791627,13.8888335000174,43.8186590811066,33.2339129027213,13.768658243952,20.4936953215997,17.182897212755,23.0987659345772,33.1246811618639,21.3320010945999,16.8863011988747,14.9482320630308,15.1657333504435,32.6565895996511,87.521004672744,79.4165443996813,24.9818870543236,43.2340979203241,51.6578713853571,53.0543694745231,41.3912249117681,37.0716444422543,143.867471221406,32.1010572362204,46.8843592533433,28.6327324406914,27.3843482890888,33.4563924663303,46.5979403045305,243.593623113607,250.498261348892,32.9539601219083,18.9307896719354,12.5979573508616,18.8063936068136,659.677975938839,403.515531686029,52.9004822395159,594.305350737393,511.175199203331,506.587252636207,472.771040579446,18.3310854930569,31.4749635643535,41.6992551415563,77.232161110336,25.7638477066153,19.3117767724117,22.687828355474,30.5930780206502,32.4534100951834,43.9430060577035,40.1043381115639,169.709411204794,31.0417909823293,29.311442426012,29.9116911078713,24.769117764316,27.8047249225598,24.7259038230738,31.0731025975995,17.9130840136644,26.6841011179029,24.9627469901274,18.7547909601091,24.2337153866537,19.465662978431,20.7071370680167,21.3070262026689,18.6926020160034,20.5175260140213,19.9979192485351,17.9743178937745,20.9009962837233,20.7345410890985,23.9684497555479,19.2943766719137,19.5907983149945,24.5896129125977,19.9967563952954,722.556263266341,53.5103984372279,65.0925002478082,56.5924212659985,22.6085545567348,20.9013004674395,30.2838534106919,27.8323263980213,26.9077433052293,33.0992589435853,30.8443890003933,42.4923303187948,26.138861715228,38.0006861598598,26.9050440224386,32.357498711552,37.3918826283221,35.0488640927686,17.2597789867304,25.0204242615306,31.5581659884625,24.2345080135924,25.2138233317913,25.108623520734,33.7050742872291,35.8692659590433,47.5706145359366,41.8316385694904,17.7871576252289,35.2043173060958,41.0808299786594,38.2265591054251,31.2404586938294,29.1824363300424,21.8978232532021,27.331133057827,19.4562272130042,26.0833342528677,20.1275489138296,15.6299198020771,16.8500343481863,20.4588891137161,18.8367284198008,20.7450714186248,33.9945869906553,20.8440552947533,31.615205429753,26.4802333809293,29.3362810360628,34.0037702606886,36.8967643373321,38.4413286279864,29.0048665155391,31.6694506197748,27.2667654404303,33.755842831442,36.7819011374358,37.030158996867,63.3323392544944,63.0930593229703,32.4564420192564,19.591508987636,629.839964522108,563.084942388944,20.9836730082145,19.1877904675323,18.9304931649754,22.2550084249084,22.6194567619439,13.860190281248,16.0415045339324,12.1722908239198,19.02610297872,20.1656541958805,20.5549644532192,312.324319561996,29.3815976381116,16.738166744722,15.1484872198826,23.5907275850726,37.1686387351896,21.3646959816384,20.2556783166383,26.7819213253375,27.1677741450311,31.3583850902806,28.4271122485043,27.2650297108129,29.9457797843166,33.1838595832607,26.3546521437497,29.9093075419742,60.938689429928,21.4272701897259,24.4487912349406,18.6473220477485,27.3103959809101,34.2468129795975,33.8970982440369,39.2759784357833,41.0675489111493,73.2938965188818,16.7601582521771,26.5466867235783,32.6158141925729,35.6449386325401,32.5886499128563,38.4089705403443,37.8925087618806,598.552874889925,51.6030060009515,22.9089423439177,32.4090422896995,36.1667437449007,46.8861201083116,43.2390747360328,18.3576704393364,18.8934460636938,14.6491972232689,25.7761066864081,24.3578715057474,24.6016555223487,23.3291536175091,28.8541848499967,25.766782522049,28.4563770871972,30.1685113397476,25.3903263724509,37.3291123080363,27.9602690889117,14.0923234671048,26.3149121037403,19.5241018739375,14.9727415024917,18.5990145807933,16.5577002980963,19.0118726606121,20.4420884205002,35.1278803826131,23.6752438409486,15.2655903316669,47.4016680942267,22.9079493277886,24.958762591053,31.3109183376486,36.5214459161662,40.9283590849406,37.7413711492702,48.7375439676105,45.132003126822,41.9137436602499,41.3387359061046,41.5170571951345,44.1612353129112,50.6076986446194,30.8353321716687,36.4056963533466,30.9512805302691,21.6571155109661,29.3648182928929,26.0878640877143,27.4727436400898,23.5805216986972,24.0754609936974,300.447980272279,384.371572483493,339.154143956123,266.372432632716,355.557827760963,330.107133159299,366.537217625871,427.805143063009,478.065241478336,406.441844725179,25.0127507677866,33.9171142390876,34.6589219680892,34.2780471066295,32.2804270447093,27.0249957421521,34.8927362648536,31.7293988147897,34.659274635916,29.0601793528367,32.9523089857312,32.8209834011773,31.7444710322901,35.277858975083,37.5053612280155,29.5302088595506,31.288768005111,32.7945674788299,42.4448477827406,38.8605149154809,33.2583174813853,33.7204031702741,30.0429599333624,32.2669044923769,33.1265019061964,33.6766139408873,33.1099630899718,34.7252019097953,31.5065544122399,30.3016826695179,32.8619000203962,29.8468581597957,38.4677180579508,33.9311682197266,33.1799370887563,47.4640098082097,35.5576044837021,38.891660782742,32.7103047837722,34.8534442208834,34.3164396718224
|phase1_expression=18.7374151112609,46.0647538083957,47.7749201359013,27.8267074402284,23.5420993074783,27.0285627778143,27.099066309081,26.4702813055231,28.8616880410917,31.3646465271471,24.3129514880217,25.9259516734843,38.8625656943837,39.1643402837108,31.3123176106723,37.0529739323381,27.9824751251259,69.4016763788123,67.734530201235,64.0828374215026,109.620801004729,21.4468454593912,28.470777016144,31.5185072903011,23.1703373877842,42.4931653445115,37.9070556619986,44.1716027006073,28.1234660795433,26.2111334950328,52.5501310253072,38.7368710810375,30.1381745916439,0,12.9983228888074,13.2987716286794,15.1085323634153,42.2716947044277,35.9414258480948,38.7407570540611,32.9409633297368,38.250547157673,33.5002143591496,22.031943145726,22.3029248682932,27.8991063285756,5.47673941043627,10.9012578190223,12.9614847813338,15.3599620268684,24.2176509411877,15.8127820801469,80.8712161198289,32.6412963905105,36.6342241065286,18.0081605225163,20.3438742356517,19.0798674142654,58.2671407275642,78.8196559115329,70.9891171926921,14.5703148789727,14.2287167377782,16.6481447697059,12.8552627133707,12.0781619540837,8.68840320503374,8.06858441175265,19.3899575016853,16.8757422914613,12.8298226424343,149.109813858785,159.246218026113,24.4981598429908,30.0954778997262,18.3843757322004,305.020990368307,472.953900267535,423.339605654207,60.9314649313496,90.0238413047711,65.6350846901518,410.119825533029,267.312239765048,348.22720668335,139.064692343571,159.313910814196,91.7085273460479,28.7002272732768,34.2339167283738,29.2763133588695,13.7667820317022,4.0798280022465,12.4131734076698,10.3964226791627,13.8888335000174,43.8186590811066,33.2339129027213,13.768658243952,20.4936953215997,17.182897212755,23.0987659345772,33.1246811618639,21.3320010945999,16.8863011988747,14.9482320630308,15.1657333504435,32.6565895996511,87.521004672744,79.4165443996813,24.9818870543236,43.2340979203241,51.6578713853571,53.0543694745231,41.3912249117681,37.0716444422543,143.867471221406,32.1010572362204,46.8843592533433,28.6327324406914,27.3843482890888,33.4563924663303,46.5979403045305,243.593623113607,250.498261348892,32.9539601219083,18.9307896719354,12.5979573508616,18.8063936068136,659.677975938839,403.515531686029,52.9004822395159,594.305350737393,511.175199203331,506.587252636207,472.771040579446,18.3310854930569,31.4749635643535,41.6992551415563,77.232161110336,25.7638477066153,19.3117767724117,22.687828355474,30.5930780206502,32.4534100951834,43.9430060577035,40.1043381115639,169.709411204794,31.0417909823293,29.311442426012,29.9116911078713,24.769117764316,27.8047249225598,24.7259038230738,31.0731025975995,17.9130840136644,26.6841011179029,24.9627469901274,18.7547909601091,24.2337153866537,19.465662978431,20.7071370680167,21.3070262026689,18.6926020160034,20.5175260140213,19.9979192485351,17.9743178937745,20.9009962837233,20.7345410890985,23.9684497555479,19.2943766719137,19.5907983149945,24.5896129125977,19.9967563952954,722.556263266341,53.5103984372279,65.0925002478082,56.5924212659985,22.6085545567348,20.9013004674395,30.2838534106919,27.8323263980213,26.9077433052293,33.0992589435853,30.8443890003933,42.4923303187948,26.138861715228,38.0006861598598,26.9050440224386,32.357498711552,37.3918826283221,35.0488640927686,17.2597789867304,25.0204242615306,31.5581659884625,24.2345080135924,25.2138233317913,25.108623520734,33.7050742872291,35.8692659590433,47.5706145359366,41.8316385694904,17.7871576252289,35.2043173060958,41.0808299786594,38.2265591054251,31.2404586938294,29.1824363300424,21.8978232532021,27.331133057827,19.4562272130042,26.0833342528677,20.1275489138296,15.6299198020771,16.8500343481863,20.4588891137161,18.8367284198008,20.7450714186248,33.9945869906553,20.8440552947533,31.615205429753,26.4802333809293,29.3362810360628,34.0037702606886,36.8967643373321,38.4413286279864,29.0048665155391,31.6694506197748,27.2667654404303,33.755842831442,36.7819011374358,37.030158996867,63.3323392544944,63.0930593229703,32.4564420192564,19.591508987636,629.839964522108,563.084942388944,20.9836730082145,19.1877904675323,18.9304931649754,22.2550084249084,22.6194567619439,13.860190281248,16.0415045339324,12.1722908239198,19.02610297872,20.1656541958805,20.5549644532192,312.324319561996,29.3815976381116,16.738166744722,15.1484872198826,23.5907275850726,37.1686387351896,21.3646959816384,20.2556783166383,26.7819213253375,27.1677741450311,31.3583850902806,28.4271122485043,27.2650297108129,29.9457797843166,33.1838595832607,26.3546521437497,29.9093075419742,60.938689429928,21.4272701897259,24.4487912349406,18.6473220477485,27.3103959809101,34.2468129795975,33.8970982440369,39.2759784357833,41.0675489111493,73.2938965188818,16.7601582521771,26.5466867235783,32.6158141925729,35.6449386325401,32.5886499128563,38.4089705403443,37.8925087618806,598.552874889925,51.6030060009515,22.9089423439177,32.4090422896995,36.1667437449007,46.8861201083116,43.2390747360328,18.3576704393364,18.8934460636938,14.6491972232689,25.7761066864081,24.3578715057474,24.6016555223487,23.3291536175091,28.8541848499967,25.766782522049,28.4563770871972,30.1685113397476,25.3903263724509,37.3291123080363,27.9602690889117,14.0923234671048,26.3149121037403,19.5241018739375,14.9727415024917,18.5990145807933,16.5577002980963,19.0118726606121,20.4420884205002,35.1278803826131,23.6752438409486,15.2655903316669,47.4016680942267,22.9079493277886,24.958762591053,31.3109183376486,36.5214459161662,40.9283590849406,37.7413711492702,48.7375439676105,45.132003126822,41.9137436602499,41.3387359061046,41.5170571951345,44.1612353129112,50.6076986446194,30.8353321716687,36.4056963533466,30.9512805302691,21.6571155109661,29.3648182928929,26.0878640877143,27.4727436400898,23.5805216986972,24.0754609936974,300.447980272279,384.371572483493,339.154143956123,266.372432632716,355.557827760963,330.107133159299,366.537217625871,427.805143063009,478.065241478336,406.441844725179,25.0127507677866,33.9171142390876,34.6589219680892,34.2780471066295,32.2804270447093,27.0249957421521,34.8927362648536,31.7293988147897,34.659274635916,29.0601793528367,32.9523089857312,32.8209834011773,31.7444710322901,35.277858975083,37.5053612280155,29.5302088595506,31.288768005111,32.7945674788299,42.4448477827406,38.8605149154809,33.2583174813853,33.7204031702741,30.0429599333624,32.2669044923769,33.1265019061964,33.6766139408873,33.1099630899718,34.7252019097953,31.5065544122399,30.3016826695179,32.8619000203962,29.8468581597957,38.4677180579508,33.9311682197266,33.1799370887563,47.4640098082097,35.5576044837021,38.891660782742,32.7103047837722,34.8534442208834,34.3164396718224
|short_description=p1@Nsf
|short_description=p1@Nsf
}}
}}

Latest revision as of 19:26, 26 September 2015

Short description:p1@Nsf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nsf_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000107009, ENSMUST00000145126_5end
EntrezGene:Nsf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nsf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I546.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I647.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E728.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F231.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E839.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A269.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A467.73
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A664.08
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3109.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I928.47
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.17
GP2+ M cell, pool1.CNhs13228.11845-124H942.49
GP2+ M cell, pool2.CNhs13231.11846-124I137.91
GP2+ M cell, pool3.CNhs13240.11847-124I244.17
Ileum epithelium, pool1.CNhs13199.10252-104B928.12
Ileum epithelium, pool2.CNhs13232.10253-104C126.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C852.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G630.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H135.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.90
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A280.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.01
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C358.27
Mouse Granule cells, donor2.CNhs12357.11731-123E378.82
Mouse Granule cells, donor3.CNhs12108.11636-122C770.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1149.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5159.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3305.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3472.95
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7423.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F490.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4410.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5267.31
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6348.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6139.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6159.31
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E191.71
Mouse Schwann, donor1.CNhs12507.11728-123D928.70
Mouse Schwann, donor2.CNhs12573.11746-123F934.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.66
accessory axillary lymph node, adult.CNhs10475.1063-29H987.52
adrenal gland, adult.CNhs10508.49-24D779.42
adrenal gland, embryo E14.CNhs11038.406-44C524.98
adrenal gland, embryo E16.CNhs11004.1254-43D643.23
adrenal gland, embryo E17.CNhs11043.1263-45I151.66
adrenal gland, embryo E18.CNhs11026.1262-18F553.05
adrenal gland, neonate N00.CNhs11191.1311-23C141.39
adrenal gland, neonate N25.CNhs11223.1377-27I337.07
amnion, adult pregnant day17.5.CNhs10488.583-22A8143.87
aorta, adult.CNhs10498.46-23H132.10
bone (os femoris), adult.CNhs10483.56-12G246.88
bone (os femoris), neonate N02.CNhs11227.1985-43F528.63
bone (os femoris), neonate N16.CNhs11225.1525-43A627.38
bone (os femoris), neonate N20.CNhs11195.1350-25C333.46
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B2243.59
cerebellum, neonate N30.CNhs11135.1395-42I2250.50
colon, adult.CNhs10468.36-18H732.95
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.81
corpora quadrigemina, adult.CNhs10501.16-22A4659.68
corpus striatum, adult.CNhs10487.19-21D8403.52
corpus striatum, neonate N00.CNhs11226.630-43F152.90
cortex, adult.CNhs10473.12-14D5594.31
cortex, neonate N30.CNhs11107.1392-42F2511.18
diencephalon, adult.CNhs10482.20-12F2506.59
diencephalon, neonate N30.CNhs11201.1388-42B2472.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A231.47
epididymis, adult.CNhs10490.58-23B241.70
eyeball, adult.CNhs10484.31-12G477.23
eyeball, embryo E12.CNhs11016.345-16C625.76
eyeball, embryo E14.CNhs10521.399-16E219.31
eyeball, embryo E15.CNhs10593.426-16C922.69
eyeball, embryo E17.CNhs11023.1261-18D430.59
eyeball, neonate N00.CNhs11207.633-15C632.45
eyeball, neonate N01.CNhs11140.1532-43E743.94
eyeball, neonate N02.CNhs11205.1551-44G840.10
eyeball, neonate N16.CNhs11188.777-19A2169.71
forelimb, embryo E11.CNhs10596.335-25E231.04
forelimb, embryo E12.CNhs10600.359-14H229.31
forelimb, embryo E13.CNhs10589.384-1E229.91
forelimb, embryo E14.CNhs10577.413-26A824.77
forelimb, embryo E15.CNhs11007.437-20E727.80
forelimb, embryo E17.CNhs10598.1517-43C424.73
forelimb, embryo E18.CNhs11008.1520-43B531.07
gonad, embryo E13.CNhs11044.1564-45I617.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.96
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E924.23
heart, embryo E12.CNhs11015.353-12F519.47
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D421.31
heart, embryo E15.CNhs11017.431-16C818.69
heart, embryo E16.CNhs11021.457-17C620.52
heart, embryo E17.CNhs11025.479-18E520.00
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E320.90
heart, neonate N03.CNhs11221.1349-25I220.73
heart, neonate N10.CNhs11118.749-24G123.97
heart, neonate N16.CNhs11209.782-15G119.29
heart, neonate N20.CNhs11127.821-26I619.59
heart, neonate N25.CNhs11196.1351-25D324.59
heart, neonate N30.CNhs11202.1390-42D220.00
hippocampus, adult.CNhs10478.13-16E8722.56
hippocampus, neonate N00.CNhs11228.627-43G153.51
intestinal mucosa, adult.CNhs10506.860-29I365.09
intestine, adult.CNhs10496.178-9A356.59
intestine, embryo E12.CNhs11019.1251-16I522.61
intestine, embryo E13.CNhs11010.381-16D520.90
intestine, embryo E15.CNhs10602.976-16D830.28
intestine, embryo E16.CNhs10585.463-22H427.83
intestine, embryo E17.CNhs10582.482-18D326.91
intestine, embryo E18.CNhs10526.1289-20F733.10
intestine, neonate N00.CNhs11126.644-26D130.84
intestine, neonate N01.CNhs11192.1322-23E942.49
intestine, neonate N06.CNhs11102.688-20B826.14
intestine, neonate N07.CNhs11095.720-20F238.00
intestine, neonate N10.CNhs11098.755-23A526.91
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E337.39
intestine, neonate N30.CNhs11131.1384-42G135.05
kidney, embryo E14.CNhs10606.411-4I917.26
kidney, embryo E15.CNhs10997.434-16F825.02
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I224.23
kidney, embryo E18.CNhs11001.1288-20C725.21
kidney, neonate N00.CNhs11214.646-21G725.11
kidney, neonate N10.CNhs11206.758-6D533.71
kidney, neonate N20.CNhs11113.832-19I135.87
kidney, neonate N25.CNhs11122.1353-25F347.57
kidney, neonate N30.CNhs11203.1385-42H141.83
liver, adult pregnant day01.CNhs10466.508-5B217.79
liver, embryo E12.CNhs10601.355-15F835.20
liver, embryo E13.CNhs10524.378-3H641.08
liver, embryo E14.CNhs10594.409-16E138.23
liver, embryo E15.CNhs10520.433-16D731.24
liver, embryo E16.CNhs10523.462-17F529.18
liver, embryo E17.CNhs10510.481-18A321.90
liver, embryo E18.CNhs10579.499-43G427.33
liver, neonate N00.CNhs11117.641-24F419.46
liver, neonate N03.CNhs11123.1345-25G226.08
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H215.63
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H118.84
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B133.99
lung, embryo E12.CNhs10522.354-16G220.84
lung, embryo E14.CNhs10604.404-26F831.62
lung, embryo E15.CNhs11020.432-17C526.48
lung, embryo E16.CNhs10998.458-17B629.34
lung, embryo E17.CNhs10605.480-44A634.00
lung, embryo E18.CNhs10583.1287-20I636.90
lung, neonate N00.CNhs11224.640-42C638.44
lung, neonate N06.CNhs11212.683-20E529.00
lung, neonate N07.CNhs11111.715-19A331.67
lung, neonate N10.CNhs11219.750-23E627.27
lung, neonate N20.CNhs11109.822-18A433.76
lung, neonate N25.CNhs11119.1359-25C736.78
lung, neonate N30.CNhs11133.1394-42H237.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A163.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A163.09
mammary gland, adult lactating day02.CNhs10480.595-22B632.46
mammary gland, adult pregnant day19.CNhs10476.588-5H219.59
medulla oblongata, adult.CNhs10477.17-12C2629.84
medulla oblongata, neonate N30.CNhs11200.1396-42A3563.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I9312.32
ovary, adult.CNhs10507.91-2I729.38
ovary, embryo E18.CNhs11040.505-44H716.74
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G623.59
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F421.36
pancreas, embryo E15.CNhs11042.1556-45F220.26
pancreas, embryo E16.CNhs11003.460-26E526.78
pancreas, embryo E17.CNhs10599.1558-45G327.17
pancreas, embryo E18.CNhs10580.1535-43I731.36
pancreas, neonate N00.CNhs11105.645-26G928.43
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D829.95
pancreas, neonate N16.CNhs11136.787-43B633.18
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H529.91
pituitary gland, adult.CNhs10493.21-1G860.94
pituitary gland, embryo E12.CNhs11018.346-16E621.43
pituitary gland, embryo E13.CNhs11009.370-44C724.45
pituitary gland, embryo E14.CNhs11037.398-44A518.65
pituitary gland, embryo E15.CNhs10592.427-16B927.31
pituitary gland, embryo E16.CNhs11036.449-43F634.25
pituitary gland, embryo E17.CNhs11039.1265-44F533.90
pituitary gland, neonate N00.CNhs11190.1308-22E939.28
placenta, adult pregnant day10.CNhs10472.539-13I741.07
placenta, adult pregnant day17.CNhs10464.577-18G373.29
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G432.62
skin, neonate N03.CNhs11215.662-22H335.64
skin, neonate N06.CNhs11097.693-20I532.59
skin, neonate N10.CNhs11108.762-6C438.41
small intestine, neonate N16.CNhs11114.790-21I137.89
spinal cord, adult.CNhs10505.24-13C9598.55
spleen, adult.CNhs10465.25-2G251.60
spleen, embryo E16.CNhs11035.461-43C122.91
spleen, embryo E18.CNhs11011.1271-21F232.41
spleen, neonate N10.CNhs11116.752-24D136.17
spleen, neonate N20.CNhs11112.824-19H146.89
spleen, neonate N25.CNhs11099.1354-25G343.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.65
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E324.36
stomach, embryo E15.CNhs10603.1252-16G824.60
stomach, embryo E16.CNhs11022.459-17D423.33
stomach, embryo E17.CNhs11006.1035-18D528.85
stomach, embryo E18.CNhs10999.1286-20C625.77
stomach, neonate N03.CNhs11193.1340-24B828.46
stomach, neonate N07.CNhs11210.718-18A930.17
stomach, neonate N25.CNhs11104.1355-25E425.39
stomach, neonate N30.CNhs11134.1386-42I137.33
submandibular gland, adult.CNhs10469.59-29C127.96
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F526.31
testis, embryo E15.CNhs11034.443-27C519.52
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I518.60
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B719.01
testis, neonate N07.CNhs11222.726-26I420.44
testis, neonate N10.CNhs11204.763-44D935.13
testis, neonate N20.CNhs11110.839-18H323.68
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B547.40
thymus, embryo E14.CNhs11041.402-44I422.91
thymus, embryo E15.CNhs11005.430-45I224.96
thymus, embryo E16.CNhs11002.456-26C531.31
thymus, embryo E17.CNhs10581.478-18C136.52
thymus, embryo E18.CNhs10595.1273-19G440.93
thymus, neonate N02.CNhs11181.1541-43F837.74
thymus, neonate N03.CNhs11137.2104-43C748.74
thymus, neonate N06.CNhs11197.681-26C445.13
thymus, neonate N07.CNhs11211.713-19D341.91
thymus, neonate N10.CNhs11194.748-24E441.34
thymus, neonate N20.CNhs11186.820-7A241.52
thymus, neonate N25.CNhs11125.1362-25G744.16
thymus, neonate N30.CNhs11132.1393-42G250.61
tongue, adult.CNhs10499.32-1B430.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H336.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.66
urinary bladder, adult.CNhs10481.879-12E429.36
uterus, adult pregnant day19.CNhs10497.590-15F526.09
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D523.58
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1300.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2384.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3339.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7266.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4355.56
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5330.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6366.54
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7427.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8478.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9406.44
whole body, embryo E11.CNhs11014.324-5I825.01
whole body, embryo E12.CNhs10587.857-27C933.92
whole body, embryo E13.CNhs10512.372-23H234.66
whole body, embryo E14.5.CNhs10578.420-27D234.28
whole body, embryo E14.CNhs10519.395-14B132.28
whole body, embryo E16.CNhs10514.453-14F227.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.95
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G532.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G538.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.72
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.93
whole body, embryo E17.5.CNhs10513.490-9F933.18
whole body, embryo E17.CNhs10517.475-3I547.46
whole body, embryo E18.CNhs10516.493-3B335.56
whole body, neonate N00.CNhs10525.657-19C238.89
whole body, neonate N01.CNhs10576.659-23C632.71
whole body, neonate N06.CNhs10515.692-21D134.85
whole body, neonate N10.CNhs10518.761-6B434.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.42e-1054
neural tube2.26e-0952
neural rod2.26e-0952
future spinal cord2.26e-0952
neural keel2.26e-0952
gray matter4.73e-0834
neurectoderm5.00e-0864
neural plate5.00e-0864
presumptive neural plate5.00e-0864
occipital lobe2.48e-0710
visual cortex2.48e-0710
neocortex2.48e-0710
brain3.18e-0747
future brain3.18e-0747
ecto-epithelium8.05e-0773
regional part of brain8.49e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:103815329..103815348,-&oldid=4270216"