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FFCP PHASE1:Mm9::chr17:71824625..71824680,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74355
|EntrezGene=74355
|HGNC=
|HGNC=
|MCL_coexpression_id=123
|TSSclassifier=NA
|UniProt=Q6P5D8
|UniProt=Q6P5D8
|association_with_transcript=2bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|association_with_transcript=2bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|cluster_id=chr17:71824625..71824680,-
|description=CAGE_peak_1_at_Smchd1_5end
|description=CAGE_peak_1_at_Smchd1_5end
|id=chr17:71824625..71824680,-
|id=chr17:71824625..71824680,-
|ontology_enrichment_celltype=CL:0000542!3.24e-07!13;CL:0000051!3.24e-07!13;CL:0000838!5.57e-07!12;CL:0000988!5.76e-07!32;CL:0002032!5.76e-07!32;CL:0000037!5.76e-07!32;CL:0000566!5.76e-07!32;CL:0000837!5.76e-07!32
|ontology_enrichment_celltype=CL:0000542!3.24e-07!13;CL:0000051!3.24e-07!13;CL:0000838!5.57e-07!12;CL:0000988!5.76e-07!32;CL:0002032!5.76e-07!32;CL:0000037!5.76e-07!32;CL:0000566!5.76e-07!32;CL:0000837!5.76e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000542,3.24e-07,13;CL:0000051,3.24e-07,13;CL:0000838,5.57e-07,12;CL:0000988,5.76e-07,32;CL:0002032,5.76e-07,32;CL:0000037,5.76e-07,32;CL:0000837,5.76e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.67e-12!29;UBERON:0002390!1.02e-09!45;UBERON:0003061!1.02e-09!45;UBERON:0002370!2.93e-09!23;UBERON:0000974!2.93e-09!23;UBERON:0004807!2.93e-09!23;UBERON:0005058!2.93e-09!23;UBERON:0003351!2.93e-09!23;UBERON:0009113!2.93e-09!23;UBERON:0003295!2.93e-09!23;UBERON:0009722!2.93e-09!23;UBERON:0005562!2.93e-09!23;UBERON:0007690!2.93e-09!23;UBERON:0002193!3.31e-09!48;UBERON:0003408!6.90e-09!24;UBERON:0000065!8.44e-09!41;UBERON:0001004!1.36e-08!42;UBERON:0006562!2.33e-08!24;UBERON:0001557!2.33e-08!24;UBERON:0001042!2.33e-08!24;UBERON:0008814!2.33e-08!24;UBERON:0009145!2.33e-08!24;UBERON:0003081!3.63e-07!88;UBERON:0005057!7.84e-07!51
|ontology_enrichment_uberon=UBERON:0004177!3.67e-12!29;UBERON:0002390!1.02e-09!45;UBERON:0003061!1.02e-09!45;UBERON:0002370!2.93e-09!23;UBERON:0000974!2.93e-09!23;UBERON:0004807!2.93e-09!23;UBERON:0005058!2.93e-09!23;UBERON:0003351!2.93e-09!23;UBERON:0009113!2.93e-09!23;UBERON:0003295!2.93e-09!23;UBERON:0009722!2.93e-09!23;UBERON:0005562!2.93e-09!23;UBERON:0007690!2.93e-09!23;UBERON:0002193!3.31e-09!48;UBERON:0003408!6.90e-09!24;UBERON:0000065!8.44e-09!41;UBERON:0001004!1.36e-08!42;UBERON:0006562!2.33e-08!24;UBERON:0001557!2.33e-08!24;UBERON:0001042!2.33e-08!24;UBERON:0008814!2.33e-08!24;UBERON:0009145!2.33e-08!24;UBERON:0003081!3.63e-07!88;UBERON:0005057!7.84e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.67e-12,29;UBERON:0005057,3.67e-12,29;UBERON:0000077,1.62e-10,35;UBERON:0002390,1.02e-09,45;UBERON:0003061,1.02e-09,45;UBERON:0002370,2.93e-09,23;UBERON:0000974,2.93e-09,23;UBERON:0004807,2.93e-09,23;UBERON:0005058,2.93e-09,23;UBERON:0003351,2.93e-09,23;UBERON:0009113,2.93e-09,23;UBERON:0003295,2.93e-09,23;UBERON:0009722,2.93e-09,23;UBERON:0005562,2.93e-09,23;UBERON:0007690,2.93e-09,23;UBERON:0002193,3.31e-09,48;UBERON:0002405,3.31e-09,48;UBERON:0003408,6.90e-09,24;UBERON:0000153,6.92e-09,43;UBERON:0000065,8.44e-09,41;UBERON:0001004,1.36e-08,42;UBERON:0006562,2.33e-08,24;UBERON:0001557,2.33e-08,24;UBERON:0001042,2.33e-08,24;UBERON:0008814,2.33e-08,24;UBERON:0009145,2.33e-08,24;UBERON:0007811,2.10e-07,36;UBERON:0001041,5.38e-07,80;UBERON:0003081,9.48e-07,87
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57,23.9771856624399,20.4906530094179,16.1588297172171,22.3874814998802,17.9357998923979,14.9200886930897,11.0172727298024,18.0188400795208,12.4012446510522,20.1847337159371,19.3586433834804,18.6673140810286,17.307416346016,17.0645686745686,15.4911555012395,20.962905959876,23.0690557736564,18.6019773036025,17.5698303817298,62.5702018843793,22.7052241124984,20.5421914329654,37.6770386635606,56.3934091352567,44.7033048257846,50.3618933488669,44.1591686251986,55.3296145715849,49.2295970991299,49.0015259765045,57.0128602327552,48.2983445034454,49.6726834271668,11.1097887971454,11.5432695754514,12.7393676385455,13.4307693091263,15.4551675225752,15.0145980360946,20.3298302936664,15.2201549146137,8.02515366456581,22.0253218620656,21.6352861158373,24.0616115644547,19.247556422493,18.4972280338073,21.1510291269116,27.675922509504,20.7147753483141,20.8445508132734,19.1571315348173,34.1460373551941,27.9317411380722,21.1709671135126,27.7141657457855,23.476674214334,20.5904729464016,23.3359064191696,21.427645952845,20.2179102042844,21.226565788159,21.5457404906704,22.0692819421709,22.6612448077115,23.7533315422065,21.7680427341774,22.8620971815875,19.7003354106254,20.255468148689,23.4888963457885,22.3742358604284,19.5435473859687,23.0718548007139,27.8970342238365,20.784537578423,20.4217355501267,23.0997879544277,20.4879329617505,22.6239951836545,24.580544606101,29.1793981262024,23.4897335885865,19.8979054398638,22.5077073743329,21.5362209248493,18.3261280432084,16.2376875659665,20.5859815431959,14.1814895671877,12.8163182486125,16.5443564339637,17.3900876715316
|phase1_expression=14.2532473923267,5.58360652222978,5.0049916332849,7.25914107136392,5.00895729946347,14.6054966563344,14.0167584357315,66.4985115724118,80.671937792905,77.4753582125798,17.8066686954525,23.3732425856336,83.0323540166348,68.01307308198,49.9664642723494,50.6188168474565,30.0811607595103,83.4397427372539,86.1078643044039,60.6877202071183,15.7330086779479,32.6667229450913,35.5231713228952,13.4393635146462,11.4704640533585,5.16808767703518,6.03066794622705,7.97243560937789,8.7410772949932,14.1136872665561,10.8647950221099,13.9706748161119,17.8368788399525,0,17.0422455653252,18.1195763440757,25.3170001765338,14.2300754450549,17.1893775795236,17.2762835511353,12.3528612486513,17.0761371239611,11.6522484727477,18.5068322424099,16.6258167200004,13.5824596599644,2.34717403304412,4.14247797122848,2.19686182734472,4.47188767870852,3.63964696225943,4.31257693094915,88.4214333924271,126.938374851985,105.197359131591,5.91696702882678,8.30946975822394,8.76642556871652,10.9250888864183,7.40587370980846,7.60597684207415,1.35537812827653,3.55717918444456,2.6996991518442,4.94433181283487,2.1314403448383,4.19440154725767,5.76327457982332,15.2423730093462,9.18040380655497,11.9885227970288,7.14127461009509,7.06779331045163,14.4539143073646,12.4599112323707,9.19218786610021,9.91042928994498,12.3856717942632,10.752457327937,12.3973110466382,11.0700048758916,13.022834263919,7.53794097303729,7.31591393041184,11.7654650788144,12.0797720044204,12.2439645487229,12.8615617619457,6.51245262665383,14.9631689011435,31.5952292684829,14.6272059086836,1.3599426674155,2.69851595818909,3.89865850468601,8.06448396775204,10.3928870897496,15.5091593546033,9.61208217030615,11.3068663843309,14.084341977668,6.41632387071589,22.9324715735981,42.6640021891999,14.0719176657289,13.4280728701802,9.0994400102661,15.7573754012303,161.577239395835,17.813056687779,14.9197381018877,13.7009465240464,15.681853813412,12.2085338847624,15.521709341913,14.2003248202533,19.5284024510155,20.6777080395474,38.9228642857945,18.9267214438469,31.5803371398363,30.0622656943838,16.775258509631,20.4946557908083,20.7352239745321,12.517395705221,47.8062346778622,34.1944556666242,31.2592758599739,18.4242486467932,25.1625331550245,26.890031352153,23.9877561865342,22.2472447877388,14.5451631191692,16.8730913590468,15.6832620329487,27.8671614166608,16.1742565397552,10.1012090825508,25.2433659347645,18.6220704591113,20.8872070574205,24.1127708537144,30.1401691240382,31.3878614697882,25.4868690802462,20.1788629176432,24.7903191872769,35.3628369913822,25.5129130037726,22.1387689751851,29.1949611686878,23.6811473235073,21.1955600500182,18.1121182804829,26.6841011179029,35.256663274716,23.5855704498342,25.0622184767957,18.2930326785255,18.7264543919455,23.674473558521,17.3152523937715,14.8096428371883,14.8821724640261,14.4867636755794,12.7274223180215,15.9623054416076,16.0884114797513,14.3491792896165,15.2047986922346,19.7595103761946,13.4206418760372,22.2907345477975,28.4016730166825,7.26921322564356,11.6358249331959,26.2344548158338,24.1526138734856,26.0312271870629,22.7902382824377,19.5692678583486,13.6962450801043,13.7613427847908,11.6936257854048,11.5614196048124,8.35617182572834,11.6978452271472,25.1669434423182,12.5360068927323,9.55878111620963,7.2073802362171,28.1051341019933,36.0664754153857,28.511185898344,21.9166310499417,19.7783012090698,23.2078091246024,14.465794502001,13.0308944108341,13.0800993757109,11.2651998293117,35.2043173060958,33.4150291692445,40.2503181168888,40.3691641563121,30.6294992885569,24.9533334745791,22.4402987211632,15.5649817704034,18.6701760967895,21.5652309791032,13.0249331683976,16.5379966750717,10.6083128737787,9.86685774370517,8.68398338454061,26.4197061938245,24.633883530163,35.0374699350356,32.7608015546113,29.1015907877743,26.2984824183651,19.9956658344252,16.1960927721973,29.3201368037515,20.3747514476873,23.2803962239931,25.5626770956551,22.6217326244323,23.2884984316234,12.0633027151418,11.9659250440116,20.1623351937805,17.9358885098076,15.7339578188036,16.9956945558695,13.114795630134,12.1186045058099,20.5080342620567,21.0836921920185,28.4358885007295,27.9593493604486,21.8342700600746,22.0799694015289,22.2645885921192,21.9191893433484,18.5785255634866,26.3483479465882,19.5877317587411,12.4645922567079,17.7546785695398,23.2607873391275,9.2921596837974,20.1507928008635,14.511530734308,14.1453809816924,6.79194353625777,15.6791925451403,14.9888410037568,19.2672876623078,21.746340081468,14.2216541071117,6.32511651449993,7.21948802737308,21.7881347682424,24.8484309763208,8.02023839453078,18.4329850127169,16.847322196016,20.334045206636,19.087686389846,8.52501857520878,25.8138878870081,19.0648863777438,8.82113592219848,20.281009111802,18.2454802166373,26.1758094188196,20.2932984805332,25.9342621597197,12.8251568117134,14.4631735568198,50.5777807161644,24.3536504196603,31.6682641802207,46.9037457941681,69.9874445931649,52.3902016642937,37.3952545986482,42.965095863363,38.0049927962165,5.72802370809068,25.1487114897003,28.6680448648857,23.9771856624399,20.4906530094179,16.1588297172171,22.3874814998802,17.9357998923979,14.9200886930897,11.0172727298024,18.0188400795208,12.4012446510522,20.1847337159371,19.3586433834804,18.6673140810286,17.307416346016,17.0645686745686,15.4911555012395,20.962905959876,23.0690557736564,18.6019773036025,17.5698303817298,62.5702018843793,22.7052241124984,20.5421914329654,37.6770386635606,56.3934091352567,44.7033048257846,50.3618933488669,44.1591686251986,55.3296145715849,49.2295970991299,49.0015259765045,57.0128602327552,48.2983445034454,49.6726834271668,11.1097887971454,11.5432695754514,12.7393676385455,13.4307693091263,15.4551675225752,15.0145980360946,20.3298302936664,15.2201549146137,8.02515366456581,22.0253218620656,21.6352861158373,24.0616115644547,19.247556422493,18.4972280338073,21.1510291269116,27.675922509504,20.7147753483141,20.8445508132734,19.1571315348173,34.1460373551941,27.9317411380722,21.1709671135126,27.7141657457855,23.476674214334,20.5904729464016,23.3359064191696,21.427645952845,20.2179102042844,21.226565788159,21.5457404906704,22.0692819421709,22.6612448077115,23.7533315422065,21.7680427341774,22.8620971815875,19.7003354106254,20.255468148689,23.4888963457885,22.3742358604284,19.5435473859687,23.0718548007139,27.8970342238365,20.784537578423,20.4217355501267,23.0997879544277,20.4879329617505,22.6239951836545,24.580544606101,29.1793981262024,23.4897335885865,19.8979054398638,22.5077073743329,21.5362209248493,18.3261280432084,16.2376875659665,20.5859815431959,14.1814895671877,12.8163182486125,16.5443564339637,17.3900876715316
|short_description=p1@Smchd1
|short_description=p1@Smchd1
}}
}}

Latest revision as of 20:39, 26 September 2015

Short description:p1@Smchd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smchd1_5end
Coexpression cluster:MCL_coexpression_mm9:123
Association with transcript: 2bp_to_ENSMUST00000024850, ENSMUST00000127430, NM_028887, uc008dmh.1_5end
EntrezGene:Smchd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smchd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E966.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E780.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F277.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E483.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E868.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A149.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A350.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A283.44
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A486.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A660.69
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I935.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A288.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9126.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1105.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.86
Mouse Schwann, donor1.CNhs12507.11728-123D96.51
Mouse Schwann, donor2.CNhs12573.11746-123F914.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H9161.58
adrenal gland, adult.CNhs10508.49-24D717.81
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I115.68
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C115.52
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A819.53
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F518.93
bone (os femoris), neonate N16.CNhs11225.1525-43A631.58
bone (os femoris), neonate N20.CNhs11195.1350-25C330.06
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C747.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.26
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F126.89
cortex, adult.CNhs10473.12-14D523.99
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.87
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C625.24
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C920.89
eyeball, embryo E17.CNhs11023.1261-18D424.11
eyeball, neonate N00.CNhs11207.633-15C630.14
eyeball, neonate N01.CNhs11140.1532-43E731.39
eyeball, neonate N02.CNhs11205.1551-44G825.49
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E224.79
forelimb, embryo E12.CNhs10600.359-14H235.36
forelimb, embryo E13.CNhs10589.384-1E225.51
forelimb, embryo E14.CNhs10577.413-26A822.14
forelimb, embryo E15.CNhs11007.437-20E729.19
forelimb, embryo E17.CNhs10598.1517-43C423.68
forelimb, embryo E18.CNhs11008.1520-43B521.20
gonad, embryo E13.CNhs11044.1564-45I618.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.59
heart, embryo E11.CNhs10586.331-24E925.06
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E312.73
heart, neonate N03.CNhs11221.1349-25I215.96
heart, neonate N10.CNhs11118.749-24G116.09
heart, neonate N16.CNhs11209.782-15G114.35
heart, neonate N20.CNhs11127.821-26I615.20
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G128.40
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A311.64
intestine, embryo E12.CNhs11019.1251-16I526.23
intestine, embryo E13.CNhs11010.381-16D524.15
intestine, embryo E15.CNhs10602.976-16D826.03
intestine, embryo E16.CNhs10585.463-22H422.79
intestine, embryo E17.CNhs10582.482-18D319.57
intestine, embryo E18.CNhs10526.1289-20F713.70
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E911.69
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F28.36
intestine, neonate N10.CNhs11098.755-23A511.70
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E312.54
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F828.11
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I228.51
kidney, embryo E18.CNhs11001.1288-20C721.92
kidney, neonate N00.CNhs11214.646-21G719.78
kidney, neonate N10.CNhs11206.758-6D523.21
kidney, neonate N20.CNhs11113.832-19I114.47
kidney, neonate N25.CNhs11122.1353-25F313.03
kidney, neonate N30.CNhs11203.1385-42H113.08
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F835.20
liver, embryo E13.CNhs10524.378-3H633.42
liver, embryo E14.CNhs10594.409-16E140.25
liver, embryo E15.CNhs10520.433-16D740.37
liver, embryo E16.CNhs10523.462-17F530.63
liver, embryo E17.CNhs10510.481-18A324.95
liver, embryo E18.CNhs10579.499-43G422.44
liver, neonate N00.CNhs11117.641-24F415.56
liver, neonate N03.CNhs11123.1345-25G218.67
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H19.87
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B126.42
lung, embryo E12.CNhs10522.354-16G224.63
lung, embryo E14.CNhs10604.404-26F835.04
lung, embryo E15.CNhs11020.432-17C532.76
lung, embryo E16.CNhs10998.458-17B629.10
lung, embryo E17.CNhs10605.480-44A626.30
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E529.32
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E623.28
lung, neonate N20.CNhs11109.822-18A425.56
lung, neonate N25.CNhs11119.1359-25C722.62
lung, neonate N30.CNhs11133.1394-42H223.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H217.94
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A317.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.44
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D821.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I926.35
ovary, adult.CNhs10507.91-2I719.59
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I417.75
oviduct, adult pregnant day01.CNhs10500.988-6G623.26
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F420.15
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E514.15
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E624.85
pituitary gland, embryo E13.CNhs11009.370-44C78.02
pituitary gland, embryo E14.CNhs11037.398-44A518.43
pituitary gland, embryo E15.CNhs10592.427-16B916.85
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F519.09
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I725.81
placenta, adult pregnant day17.CNhs10464.577-18G319.06
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C320.28
skin, neonate N00.CNhs11124.650-25G418.25
skin, neonate N03.CNhs11215.662-22H326.18
skin, neonate N06.CNhs11097.693-20I520.29
skin, neonate N10.CNhs11108.762-6C425.93
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G250.58
spleen, embryo E16.CNhs11035.461-43C124.35
spleen, embryo E18.CNhs11011.1271-21F231.67
spleen, neonate N10.CNhs11116.752-24D146.90
spleen, neonate N20.CNhs11112.824-19H169.99
spleen, neonate N25.CNhs11099.1354-25G352.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C637.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C942.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E325.15
stomach, embryo E15.CNhs10603.1252-16G828.67
stomach, embryo E16.CNhs11022.459-17D423.98
stomach, embryo E17.CNhs11006.1035-18D520.49
stomach, embryo E18.CNhs10999.1286-20C616.16
stomach, neonate N03.CNhs11193.1340-24B822.39
stomach, neonate N07.CNhs11210.718-18A917.94
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I111.02
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F520.18
testis, embryo E15.CNhs11034.443-27C519.36
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G517.06
testis, neonate N00.CNhs11189.1300-22B715.49
testis, neonate N07.CNhs11222.726-26I420.96
testis, neonate N10.CNhs11204.763-44D923.07
testis, neonate N20.CNhs11110.839-18H318.60
testis, neonate N30.CNhs11130.1391-42E217.57
thymus, adult.CNhs10471.38-12B562.57
thymus, embryo E14.CNhs11041.402-44I422.71
thymus, embryo E15.CNhs11005.430-45I220.54
thymus, embryo E16.CNhs11002.456-26C537.68
thymus, embryo E17.CNhs10581.478-18C156.39
thymus, embryo E18.CNhs10595.1273-19G444.70
thymus, neonate N02.CNhs11181.1541-43F850.36
thymus, neonate N03.CNhs11137.2104-43C744.16
thymus, neonate N06.CNhs11197.681-26C455.33
thymus, neonate N07.CNhs11211.713-19D349.23
thymus, neonate N10.CNhs11194.748-24E449.00
thymus, neonate N20.CNhs11186.820-7A257.01
thymus, neonate N25.CNhs11125.1362-25G748.30
thymus, neonate N30.CNhs11132.1393-42G249.67
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.43
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F515.01
uterus, adult.CNhs10509.92-27E520.33
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I834.15
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H221.17
whole body, embryo E14.5.CNhs10578.420-27D227.71
whole body, embryo E14.CNhs10519.395-14B123.48
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.54
whole body, embryo E17.5.CNhs10513.490-9F918.33
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C612.82
whole body, neonate N06.CNhs10515.692-21D116.54
whole body, neonate N10.CNhs10518.761-6B417.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ3.67e-1229
immune organ3.67e-1229
mixed endoderm/mesoderm-derived structure1.62e-1035
hematopoietic system1.02e-0945
blood island1.02e-0945
thymus2.93e-0923
neck2.93e-0923
respiratory system epithelium2.93e-0923
hemolymphoid system gland2.93e-0923
pharyngeal epithelium2.93e-0923
thymic region2.93e-0923
pharyngeal gland2.93e-0923
entire pharyngeal arch endoderm2.93e-0923
thymus primordium2.93e-0923
early pharyngeal endoderm2.93e-0923
hemolymphoid system3.31e-0948
immune system3.31e-0948
gland of gut6.90e-0924
anterior region of body6.92e-0943
respiratory tract8.44e-0941
respiratory system1.36e-0842
pharynx2.33e-0824
upper respiratory tract2.33e-0824
chordate pharynx2.33e-0824
pharyngeal arch system2.33e-0824
pharyngeal region of foregut2.33e-0824
craniocervical region2.10e-0736
foregut5.38e-0780
lateral plate mesoderm9.48e-0787
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