FFCP PHASE1:Mm9::chr11:117643469..117643481,-: Difference between revisions
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{{FFCP|EntrezGene=217353|HGNC=|MCL_coexpression_id=1272|UniProt=B1ATB7|association_with_transcript=30bp_to_ENSMUST00000152304_5end|description=CAGE_peak_10_at_Tmc6_5end|id=chr11:117643469..117643481,-|ontology_enrichment_celltype=CL:0002031!1.90e-14!25;CL:0000838!2.09e-14!12;CL:0000791!1.42e-13!9;CL:0000789!1.42e-13!9;CL:0002420!1.42e-13!9;CL:0002419!1.42e-13!9;CL:0000790!1.42e-13!9;CL:0000542!4.63e-13!13;CL:0000051!4.63e-13!13;CL:0000084!7.27e-13!11;CL:0000827!7.27e-13!11;CL:0000624!2.90e-12!8;CL:0000988!2.36e-11!32;CL:0002032!2.36e-11!32;CL:0000037!2.36e-11!32;CL:0000566!2.36e-11!32;CL:0000837!2.36e-11!32;CL:0000893!2.24e-09!6;CL:0002489!2.24e-09!6;CL:0000898!2.24e-09!6;CL:0000809!2.24e-09!6;CL:0000810!2.24e-09!6;CL:0000895!2.24e-09!6;CL:0000808!2.24e-09!6;CL:0000894!2.24e-09!6;CL:0000806!2.24e-09!6;CL:0000807!2.24e-09!6;CL:0000805!2.24e-09!6;CL:0002425!2.24e-09!6;CL:0002436!2.24e-09!6;CL:0002427!2.24e-09!6;CL:0002428!2.24e-09!6;CL:0002429!2.24e-09!6;CL:0002433!2.24e-09!6;CL:0002431!2.24e-09!6;CL:0002432!2.24e-09!6;CL:0000738!2.79e-09!17;CL:0002087!2.79e-09!17;CL:0002320!2.50e-07!46;CL:0000134!2.50e-07!46|ontology_enrichment_celltype_v019_2=CL:0000838,1.16e-16,12;CL:0000791,2.51e-16,9;CL:0000789,2.51e-16,9;CL:0002420,2.51e-16,9;CL:0002419,2.51e-16,9;CL:0000790,2.51e-16,9;CL:0002031,1.65e-15,25;CL:0000542,2.53e-15,13;CL:0000051,2.53e-15,13;CL:0000084,2.79e-13,11;CL:0000827,2.79e-13,11;CL:0000624,3.92e-13,8;CL:0000988,8.85e-12,32;CL:0002032,8.85e-12,32;CL:0000037,8.85e-12,32;CL:0000837,8.85e-12,32;CL:0000738,1.53e-11,17;CL:0002087,1.53e-11,17;CL:0002320,1.01e-07,46;CL:0000134,1.01e-07,46;CL:0000553,6.19e-07,6;CL:0000556,6.19e-07,6;CL:0000893,8.59e-07,6;CL:0002489,8.59e-07,6;CL:0000898,8.59e-07,6;CL:0000809,8.59e-07,6;CL:0000810,8.59e-07,6;CL:0000895,8.59e-07,6;CL:0000808,8.59e-07,6;CL:0000894,8.59e-07,6;CL:0000806,8.59e-07,6;CL:0000807,8.59e-07,6;CL:0000805,8.59e-07,6;CL:0002425,8.59e-07,6;CL:0002436,8.59e-07,6;CL:0002427,8.59e-07,6;CL:0002428,8.59e-07,6;CL:0002429,8.59e-07,6;CL:0002433,8.59e-07,6;CL:0002431,8.59e-07,6;CL:0002432,8.59e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.64e-14,3;DOID:4045,3.64e-14,3;DOID:0050686,2.62e-07,6|ontology_enrichment_uberon=UBERON:0004177!2.45e-25!29;UBERON:0002193!6.09e-25!48;UBERON:0002390!5.90e-22!45;UBERON:0003061!5.90e-22!45;UBERON:0002370!1.53e-19!23;UBERON:0000974!1.53e-19!23;UBERON:0004807!1.53e-19!23;UBERON:0005058!1.53e-19!23;UBERON:0003351!1.53e-19!23;UBERON:0009113!1.53e-19!23;UBERON:0003295!1.53e-19!23;UBERON:0009722!1.53e-19!23;UBERON:0005562!1.53e-19!23;UBERON:0007690!1.53e-19!23;UBERON:0006562!1.74e-18!24;UBERON:0003408!1.74e-18!24;UBERON:0001557!1.74e-18!24;UBERON:0001042!1.74e-18!24;UBERON:0008814!1.74e-18!24;UBERON:0009145!1.74e-18!24;UBERON:0002405!1.89e-16!70;UBERON:0000072!8.61e-16!27;UBERON:0005057!1.17e-13!51;UBERON:0000063!6.47e-11!35;UBERON:0003081!6.59e-11!88;UBERON:0000065!1.32e-09!41;UBERON:0001004!3.01e-09!42;UBERON:0000490!7.02e-08!66;UBERON:0003929!1.89e-07!55;UBERON:0002384!2.50e-07!46;UBERON:0002106!5.75e-07!6;UBERON:0004457!5.75e-07!6;UBERON:0000042!5.75e-07!6;UBERON:0004854!5.75e-07!6;UBERON:0009034!5.75e-07!6;UBERON:0002095!5.75e-07!6;UBERON:0004782!5.75e-07!6;UBERON:0003281!5.75e-07!6;UBERON:0009664!5.75e-07!6;UBERON:0002296!5.75e-07!6;UBERON:0005602!5.75e-07!6;UBERON:0001179!5.75e-07!6;UBERON:0006293!5.75e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.65e-10,23;UBERON:0000974,2.65e-10,23;UBERON:0004807,2.65e-10,23;UBERON:0005058,2.65e-10,23;UBERON:0003351,2.65e-10,23;UBERON:0009113,2.65e-10,23;UBERON:0003295,2.65e-10,23;UBERON:0009722,2.65e-10,23;UBERON:0005562,2.65e-10,23;UBERON:0007690,2.65e-10,23;UBERON:0006562,7.85e-10,24;UBERON:0003408,7.85e-10,24;UBERON:0001557,7.85e-10,24;UBERON:0001042,7.85e-10,24;UBERON:0008814,7.85e-10,24;UBERON:0009145,7.85e-10,24;UBERON:0002390,2.54e-09,45;UBERON:0003061,2.54e-09,45;UBERON:0002193,1.25e-08,48;UBERON:0002405,1.25e-08,48;UBERON:0000072,1.25e-08,27;UBERON:0004177,5.79e-08,29;UBERON:0005057,5.79e-08,29;UBERON:0002384,1.01e-07,46|phase1_expression=0,0,0,0,0,0,0.233612640595526,2.45334314538995,0.84473233291,2.10658073689794,0.856089841127525,0.717949430958028,1.36960583944965,2.44777126773193,0.333109761815663,0.404950534779652,0,2.05050407482854,2.05671650408608,3.39511721438424,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,9.62622750694888,3.1253413780952,4.71171369576418,9.41170380849623,4.78131839470912,6.311634589405,0,0,0,0,0,0,0,0,0,9.73139115134871,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.410843828659309,0.129920822977795,0.537080087002444,0.39736270956253,0.841368146639782,1.18151621739662,1.00966449948148,0.457240839929999,0.302478555410522,0.877120926657772,1.92423683280659,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p10@Tmc6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217353 | |||
|HGNC= | |||
|MCL_coexpression_id=1272 | |||
|TSSclassifier=NA | |||
|UniProt=B1ATB7 | |||
|association_with_transcript=30bp_to_ENSMUST00000152304_5end | |||
|cluster_id=chr11:117643469..117643481,- | |||
|description=CAGE_peak_10_at_Tmc6_5end | |||
|id=chr11:117643469..117643481,- | |||
|ontology_enrichment_celltype=CL:0002031!1.90e-14!25;CL:0000838!2.09e-14!12;CL:0000791!1.42e-13!9;CL:0000789!1.42e-13!9;CL:0002420!1.42e-13!9;CL:0002419!1.42e-13!9;CL:0000790!1.42e-13!9;CL:0000542!4.63e-13!13;CL:0000051!4.63e-13!13;CL:0000084!7.27e-13!11;CL:0000827!7.27e-13!11;CL:0000624!2.90e-12!8;CL:0000988!2.36e-11!32;CL:0002032!2.36e-11!32;CL:0000037!2.36e-11!32;CL:0000566!2.36e-11!32;CL:0000837!2.36e-11!32;CL:0000893!2.24e-09!6;CL:0002489!2.24e-09!6;CL:0000898!2.24e-09!6;CL:0000809!2.24e-09!6;CL:0000810!2.24e-09!6;CL:0000895!2.24e-09!6;CL:0000808!2.24e-09!6;CL:0000894!2.24e-09!6;CL:0000806!2.24e-09!6;CL:0000807!2.24e-09!6;CL:0000805!2.24e-09!6;CL:0002425!2.24e-09!6;CL:0002436!2.24e-09!6;CL:0002427!2.24e-09!6;CL:0002428!2.24e-09!6;CL:0002429!2.24e-09!6;CL:0002433!2.24e-09!6;CL:0002431!2.24e-09!6;CL:0002432!2.24e-09!6;CL:0000738!2.79e-09!17;CL:0002087!2.79e-09!17;CL:0002320!2.50e-07!46;CL:0000134!2.50e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.16e-16,12;CL:0000791,2.51e-16,9;CL:0000789,2.51e-16,9;CL:0002420,2.51e-16,9;CL:0002419,2.51e-16,9;CL:0000790,2.51e-16,9;CL:0002031,1.65e-15,25;CL:0000542,2.53e-15,13;CL:0000051,2.53e-15,13;CL:0000084,2.79e-13,11;CL:0000827,2.79e-13,11;CL:0000624,3.92e-13,8;CL:0000988,8.85e-12,32;CL:0002032,8.85e-12,32;CL:0000037,8.85e-12,32;CL:0000837,8.85e-12,32;CL:0000738,1.53e-11,17;CL:0002087,1.53e-11,17;CL:0002320,1.01e-07,46;CL:0000134,1.01e-07,46;CL:0000553,6.19e-07,6;CL:0000556,6.19e-07,6;CL:0000893,8.59e-07,6;CL:0002489,8.59e-07,6;CL:0000898,8.59e-07,6;CL:0000809,8.59e-07,6;CL:0000810,8.59e-07,6;CL:0000895,8.59e-07,6;CL:0000808,8.59e-07,6;CL:0000894,8.59e-07,6;CL:0000806,8.59e-07,6;CL:0000807,8.59e-07,6;CL:0000805,8.59e-07,6;CL:0002425,8.59e-07,6;CL:0002436,8.59e-07,6;CL:0002427,8.59e-07,6;CL:0002428,8.59e-07,6;CL:0002429,8.59e-07,6;CL:0002433,8.59e-07,6;CL:0002431,8.59e-07,6;CL:0002432,8.59e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.64e-14,3;DOID:4045,3.64e-14,3;DOID:0050686,2.62e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.45e-25!29;UBERON:0002193!6.09e-25!48;UBERON:0002390!5.90e-22!45;UBERON:0003061!5.90e-22!45;UBERON:0002370!1.53e-19!23;UBERON:0000974!1.53e-19!23;UBERON:0004807!1.53e-19!23;UBERON:0005058!1.53e-19!23;UBERON:0003351!1.53e-19!23;UBERON:0009113!1.53e-19!23;UBERON:0003295!1.53e-19!23;UBERON:0009722!1.53e-19!23;UBERON:0005562!1.53e-19!23;UBERON:0007690!1.53e-19!23;UBERON:0006562!1.74e-18!24;UBERON:0003408!1.74e-18!24;UBERON:0001557!1.74e-18!24;UBERON:0001042!1.74e-18!24;UBERON:0008814!1.74e-18!24;UBERON:0009145!1.74e-18!24;UBERON:0002405!1.89e-16!70;UBERON:0000072!8.61e-16!27;UBERON:0005057!1.17e-13!51;UBERON:0000063!6.47e-11!35;UBERON:0003081!6.59e-11!88;UBERON:0000065!1.32e-09!41;UBERON:0001004!3.01e-09!42;UBERON:0000490!7.02e-08!66;UBERON:0003929!1.89e-07!55;UBERON:0002384!2.50e-07!46;UBERON:0002106!5.75e-07!6;UBERON:0004457!5.75e-07!6;UBERON:0000042!5.75e-07!6;UBERON:0004854!5.75e-07!6;UBERON:0009034!5.75e-07!6;UBERON:0002095!5.75e-07!6;UBERON:0004782!5.75e-07!6;UBERON:0003281!5.75e-07!6;UBERON:0009664!5.75e-07!6;UBERON:0002296!5.75e-07!6;UBERON:0005602!5.75e-07!6;UBERON:0001179!5.75e-07!6;UBERON:0006293!5.75e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.65e-10,23;UBERON:0000974,2.65e-10,23;UBERON:0004807,2.65e-10,23;UBERON:0005058,2.65e-10,23;UBERON:0003351,2.65e-10,23;UBERON:0009113,2.65e-10,23;UBERON:0003295,2.65e-10,23;UBERON:0009722,2.65e-10,23;UBERON:0005562,2.65e-10,23;UBERON:0007690,2.65e-10,23;UBERON:0006562,7.85e-10,24;UBERON:0003408,7.85e-10,24;UBERON:0001557,7.85e-10,24;UBERON:0001042,7.85e-10,24;UBERON:0008814,7.85e-10,24;UBERON:0009145,7.85e-10,24;UBERON:0002390,2.54e-09,45;UBERON:0003061,2.54e-09,45;UBERON:0002193,1.25e-08,48;UBERON:0002405,1.25e-08,48;UBERON:0000072,1.25e-08,27;UBERON:0004177,5.79e-08,29;UBERON:0005057,5.79e-08,29;UBERON:0002384,1.01e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,2.45334314538995,0.84473233291,2.10658073689794,0.856089841127525,0.717949430958028,1.36960583944965,2.44777126773193,0.333109761815663,0.404950534779652,0,2.05050407482854,2.05671650408608,3.39511721438424,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,9.62622750694888,3.1253413780952,4.71171369576418,9.41170380849623,4.78131839470912,6.311634589405,0,0,0,0,0,0,0,0,0,9.73139115134871,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.410843828659309,0.129920822977795,0.537080087002444,0.39736270956253,0.841368146639782,1.18151621739662,1.00966449948148,0.457240839929999,0.302478555410522,0.877120926657772,1.92423683280659,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p10@Tmc6 | |||
}} |
Latest revision as of 01:10, 27 September 2015
Short description: | p10@Tmc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Tmc6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1272 |
Association with transcript: | 30bp_to_ENSMUST00000152304_5end |
EntrezGene: | Tmc6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.65e-10 | 23 |
neck | 2.65e-10 | 23 |
respiratory system epithelium | 2.65e-10 | 23 |
hemolymphoid system gland | 2.65e-10 | 23 |
pharyngeal epithelium | 2.65e-10 | 23 |
thymic region | 2.65e-10 | 23 |
pharyngeal gland | 2.65e-10 | 23 |
entire pharyngeal arch endoderm | 2.65e-10 | 23 |
thymus primordium | 2.65e-10 | 23 |
early pharyngeal endoderm | 2.65e-10 | 23 |
pharynx | 7.85e-10 | 24 |
gland of gut | 7.85e-10 | 24 |
upper respiratory tract | 7.85e-10 | 24 |
chordate pharynx | 7.85e-10 | 24 |
pharyngeal arch system | 7.85e-10 | 24 |
pharyngeal region of foregut | 7.85e-10 | 24 |
hematopoietic system | 2.54e-09 | 45 |
blood island | 2.54e-09 | 45 |
hemolymphoid system | 1.25e-08 | 48 |
immune system | 1.25e-08 | 48 |
segment of respiratory tract | 1.25e-08 | 27 |
hemopoietic organ | 5.79e-08 | 29 |
immune organ | 5.79e-08 | 29 |
connective tissue | 1.01e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.64e-14 | 3 |
muscle cancer | 3.64e-14 | 3 |
organ system cancer | 2.62e-07 | 6 |