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FFCP PHASE1:Mm9::chr7:80520700..80520719,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:80520700..80520719,+
|DHSsupport=NA
|short_description=p4@Rgma
|DPIdataset=NA
|description=CAGE_peak_4_at_Rgma_5end
|association_with_transcript=294bp_to_ENSMUST00000094312,ENSMUST00000107458,ENSMUST00000119206,NM_177740,uc009hqz.2,uc009hra.2_5end
|EntrezGene=244058
|EntrezGene=244058
|HGNC=
|HGNC=
|MCL_coexpression_id=1480
|TSSclassifier=NA
|UniProt=Q6PCX7,Q8C4C4
|UniProt=Q6PCX7,Q8C4C4
|association_with_transcript=294bp_to_ENSMUST00000094312,ENSMUST00000107458,ENSMUST00000119206,NM_177740,uc009hqz.2,uc009hra.2_5end
|cluster_id=chr7:80520700..80520719,+
|description=CAGE_peak_4_at_Rgma_5end
|id=chr7:80520700..80520719,+
|ontology_enrichment_celltype=CL:0000117!3.06e-11!23;CL:0000337!3.06e-11!23;CL:0000393!1.56e-07!39;CL:0000211!1.56e-07!39;CL:0000055!1.64e-07!50;CL:0000221!2.57e-07!44;CL:0000133!2.57e-07!44;CL:0002319!7.61e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0000393,1.65e-07,39;CL:0000211,1.65e-07,39;CL:0000221,3.52e-07,44;CL:0000133,3.52e-07,44;CL:0000540,5.62e-07,33;CL:0000047,5.62e-07,33;CL:0000031,5.62e-07,33;CL:0000404,5.62e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.71e-12!73;UBERON:0005743!5.71e-12!73;UBERON:0001049!1.82e-11!52;UBERON:0005068!1.82e-11!52;UBERON:0006241!1.82e-11!52;UBERON:0007135!1.82e-11!52;UBERON:0000073!3.26e-11!75;UBERON:0001016!3.26e-11!75;UBERON:0004121!1.58e-10!102;UBERON:0000924!1.58e-10!102;UBERON:0006601!1.58e-10!102;UBERON:0002020!8.54e-10!34;UBERON:0002616!3.37e-09!49;UBERON:0000955!4.35e-09!50;UBERON:0006238!4.35e-09!50;UBERON:0000033!1.67e-08!63;UBERON:0002346!1.67e-07!71;UBERON:0003075!1.67e-07!71;UBERON:0007284!1.67e-07!71;UBERON:0000468!3.00e-07!333;UBERON:0002791!8.11e-07!29;UBERON:0003528!8.11e-07!29;UBERON:0001893!8.11e-07!29;UBERON:0003076!9.28e-07!12;UBERON:0003057!9.28e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.54e-11,54;UBERON:0001017,7.93e-11,73;UBERON:0001016,3.08e-10,75;UBERON:0002020,4.05e-10,34;UBERON:0001049,4.46e-10,52;UBERON:0005068,4.46e-10,52;UBERON:0006241,4.46e-10,52;UBERON:0007135,4.46e-10,52;UBERON:0004121,7.28e-10,95;UBERON:0000924,7.28e-10,95;UBERON:0006601,7.28e-10,95;UBERON:0010371,2.90e-08,73;UBERON:0002240,4.27e-08,6;UBERON:0005174,4.27e-08,6;UBERON:0001137,4.27e-08,6;UBERON:0001948,2.34e-07,5;UBERON:0002315,2.34e-07,5;UBERON:0003076,5.84e-07,12;UBERON:0003057,5.84e-07,12
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.63580021170738,1.10128051297009,0.782391344348039,1.96222640742402,0.219686182734472,0.194429899074283,0.699932108126813,4.31257693094915,0,0.725362142011344,0,0.514518872071894,0.573066879877513,0.515672092277442,3.84401275633236,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,2.68952813725088,1.45165457231869,0.945041568321835,1.05162480675691,6.28432165688368,5.07997644188711,0.857435594504678,0.862609239164127,0.919218786610021,1.10115880999389,1.53224805702225,1.68967186581868,2.63772575460388,3.29355516968675,3.12548022334056,0.279182999001381,1.68828783009504,2.29197371665215,6.18720029494702,4.9830088279686,4.84638559145781,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0.969750506270444,0,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,3.14560342750128,0.915001205637253,1.13088916901578,1.73824320192276,0.767146371990992,2.28566849015516,2.59586020908412,1.12023300235348,0.373220911830279,0.505445516867349,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0.90422890701429,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0.567318240503458,0.351902248327898,0.876782929710299,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0.985004784474571,1.29710095273369,1.16959989940266,2.63460138349261,1.34206418760372,0.420579897128254,2.57261530948211,0,0.793351699990633,0.639864751605702,0.464473343720877,0.902072229254653,0.80673409849337,1.11189021922435,1.14135375667535,0.474529061544512,1.15289268306808,1.25667604400135,0.994782360205754,0.779856348476481,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0.491764273019036,0.275936746304732,2.56880943980467,1.17211686592203,0.983609672260053,1.00988370881749,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,0.321321316421807,1.70328102249922,1.06839362200353,0.651547837414304,6.26886467295635,0,0.485561272309963,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,1.06949213515416,1.26414703174326,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.8244312647074,3.55221738730992,1.99032652262914,1.43246812803764,2.29797259643086,1.45740418314925,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,0.949007980743406,1.62655573701479,1.29606408986162,1.25452977608681,0.436725127492355,1.07891477107857,2.14898984885873,0.785267825952089,1.16653475962614,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,1.35164900392623,0.704143431874524,0.13020438484395,0,1.44950472495604,0.288030006257865,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.579568782096571,3.00291960721891,5.49454872801795,3.42989406526505,0.501572104035363,1.12950368523413,2.76195141904306,2.29158205375759,2.40594455281163,1.37016503954128,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0.103787347584177,1.59609949360412,1.19513524027894,1.70174701947806,0,0.551530525350042,0.888986911206461,1.44224540067226,0.64183841918363,0.505394423527595,1.2673964994512,1.32038438970253,1.12369808963859,0.960377286073039,1.09127391015665,0.952587382566147,0.927074607558844,2.12200142510076,1.23625770240992,1.17759136107518,2.05721551431249,0.887379030796687,1.43061713968393,1.16277133305863,1.69396884747595,1.09998990259179,0.365855945745545,0.263069711437843,0.407412341537585,0,0.830445126869219,0.591026894253381,0.818462086339379,1.39443157067369,1.54325288784913,2.49810577937946,0.701794825336225,0.644613162144895,0.956441660344217,1.76473135295612,0.695603506861264
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.63580021170738,1.10128051297009,0.782391344348039,1.96222640742402,0.219686182734472,0.194429899074283,0.699932108126813,4.31257693094915,0,0.725362142011344,0,0.514518872071894,0.573066879877513,0.515672092277442,3.84401275633236,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,2.68952813725088,1.45165457231869,0.945041568321835,1.05162480675691,6.28432165688368,5.07997644188711,0.857435594504678,0.862609239164127,0.919218786610021,1.10115880999389,1.53224805702225,1.68967186581868,2.63772575460388,3.29355516968675,3.12548022334056,0.279182999001381,1.68828783009504,2.29197371665215,6.18720029494702,4.9830088279686,4.84638559145781,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0.969750506270444,0,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,3.14560342750128,0.915001205637253,1.13088916901578,1.73824320192276,0.767146371990992,2.28566849015516,2.59586020908412,1.12023300235348,0.373220911830279,0.505445516867349,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0.90422890701429,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0.567318240503458,0.351902248327898,0.876782929710299,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0.985004784474571,1.29710095273369,1.16959989940266,2.63460138349261,1.34206418760372,0.420579897128254,2.57261530948211,0,0.793351699990633,0.639864751605702,0.464473343720877,0.902072229254653,0.80673409849337,1.11189021922435,1.14135375667535,0.474529061544512,1.15289268306808,1.25667604400135,0.994782360205754,0.779856348476481,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0.491764273019036,0.275936746304732,2.56880943980467,1.17211686592203,0.983609672260053,1.00988370881749,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,0.321321316421807,1.70328102249922,1.06839362200353,0.651547837414304,6.26886467295635,0,0.485561272309963,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,1.06949213515416,1.26414703174326,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.8244312647074,3.55221738730992,1.99032652262914,1.43246812803764,2.29797259643086,1.45740418314925,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,0.949007980743406,1.62655573701479,1.29606408986162,1.25452977608681,0.436725127492355,1.07891477107857,2.14898984885873,0.785267825952089,1.16653475962614,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,1.35164900392623,0.704143431874524,0.13020438484395,0,1.44950472495604,0.288030006257865,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.579568782096571,3.00291960721891,5.49454872801795,3.42989406526505,0.501572104035363,1.12950368523413,2.76195141904306,2.29158205375759,2.40594455281163,1.37016503954128,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0.103787347584177,1.59609949360412,1.19513524027894,1.70174701947806,0,0.551530525350042,0.888986911206461,1.44224540067226,0.64183841918363,0.505394423527595,1.2673964994512,1.32038438970253,1.12369808963859,0.960377286073039,1.09127391015665,0.952587382566147,0.927074607558844,2.12200142510076,1.23625770240992,1.17759136107518,2.05721551431249,0.887379030796687,1.43061713968393,1.16277133305863,1.69396884747595,1.09998990259179,0.365855945745545,0.263069711437843,0.407412341537585,0,0.830445126869219,0.591026894253381,0.818462086339379,1.39443157067369,1.54325288784913,2.49810577937946,0.701794825336225,0.644613162144895,0.956441660344217,1.76473135295612,0.695603506861264
|short_description=p4@Rgma
}}
}}

Latest revision as of 01:48, 27 September 2015

Short description:p4@Rgma
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rgma_5end
Coexpression cluster:MCL_coexpression_mm9:1480
Association with transcript: 294bp_to_ENSMUST00000094312, ENSMUST00000107458, ENSMUST00000119206, NM_177740, uc009hqz.2, uc009hra.2_5end
EntrezGene:Rgma
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rgma

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.54e-1154
central nervous system7.93e-1173
nervous system3.08e-1075
gray matter4.05e-1034
neural tube4.46e-1052
neural rod4.46e-1052
future spinal cord4.46e-1052
neural keel4.46e-1052
ectoderm-derived structure7.28e-1095
ectoderm7.28e-1095
presumptive ectoderm7.28e-1095
ecto-epithelium2.90e-0873
spinal cord4.27e-086
dorsal region element4.27e-086
dorsum4.27e-086
regional part of spinal cord2.34e-075
gray matter of spinal cord2.34e-075
posterior neural tube5.84e-0712
chordal neural plate5.84e-0712
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