FFCP PHASE1:Mm9::chr13:108948917..108948948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71991 | |EntrezGene=71991 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFD5,D3YU16,D6RET0,Q3TZV2 | |UniProt=Q8CFD5,D3YU16,D6RET0,Q3TZV2 | ||
|association_with_transcript=0bp_to_ENSMUST00000022205,ENSMUST00000054835,ENSMUST00000120672,ENSMUST00000123657,ENSMUST00000129117,ENSMUST00000137425,ENSMUST00000152634,NM_028042,uc007ruw.1,uc007rux.1,uc007ruy.1,uc007ruz.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022205,ENSMUST00000054835,ENSMUST00000120672,ENSMUST00000123657,ENSMUST00000129117,ENSMUST00000137425,ENSMUST00000152634,NM_028042,uc007ruw.1,uc007rux.1,uc007ruy.1,uc007ruz.1_5end | ||
|cluster_id=chr13:108948917..108948948,+ | |||
|description=CAGE_peak_1_at_Ercc8_5end | |description=CAGE_peak_1_at_Ercc8_5end | ||
|id=chr13:108948917..108948948,+ | |id=chr13:108948917..108948948,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.47e-11!94;UBERON:0007811!7.05e-10!86;UBERON:0002020!1.40e-08!34;UBERON:0002791!2.21e-07!29;UBERON:0003528!2.21e-07!29;UBERON:0001893!2.21e-07!29 | |ontology_enrichment_uberon=UBERON:0000153!2.47e-11!94;UBERON:0007811!7.05e-10!86;UBERON:0002020!1.40e-08!34;UBERON:0002791!2.21e-07!29;UBERON:0003528!2.21e-07!29;UBERON:0001893!2.21e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.40e-08,34;UBERON:0002346,9.70e-08,64;UBERON:0003075,9.70e-08,64;UBERON:0007284,9.70e-08,64;UBERON:0010371,1.21e-07,73;UBERON:0003528,2.21e-07,29;UBERON:0002791,2.21e-07,29;UBERON:0001893,2.21e-07,29 | |||
|phase1_expression=13.1322054625931,4.88565570695105,4.09499315450582,3.0246421130683,2.50447864973174,7.05092942029937,5.60670337429262,13.2997023144824,45.8971234214434,33.7052917903671,43.1469279928273,34.860433480962,15.2368649638773,16.3476152523525,16.3223783289675,11.3386149738303,11.8925519281785,11.3566379528966,17.0021897671116,14.004858509335,23.0467316309399,6.7517846816602,10.9703911438353,8.47959840805055,6.8822784320151,3.44539178469012,3.87685796543167,6.24866574789078,6.84084310042946,7.30887376303799,11.0865255327652,28.5763803056834,17.221814052368,0,11.2652131702997,15.4598220183398,11.2293145944303,2.09265815368454,3.1253413780952,4.18818995179039,1.17646297606203,2.04913645487534,1.94204141212461,8.56098362233926,8.81979301609777,8.25960384727567,3.9119567217402,6.1047043786525,3.51497892375155,5.63846707315422,4.89952475688769,5.75010257459886,8.89247812106003,3.62681071005672,6.38578218370682,3.8588915405392,3.43840127926508,5.67239301505187,17.601532094785,23.2756030879694,11.4089652631112,6.09920157724438,0.889294796111139,4.04954872776629,2.96659908770092,3.5524005747305,2.09720077362883,3.45796474789399,16.6940275816649,23.7610451463776,20.1911962897327,9.71213346972932,14.1355866209033,23.3957426500562,20.3192398558661,24.8189072384706,8.8092704799511,9.44886301830389,9.98442466165583,21.6293511877518,24.5186884854458,19.7947080811569,10.0505879640497,12.9435400307286,7.79271063661732,13.5529149317887,17.3693450574906,22.3679334990361,9.08714319998209,4.76100828672749,13.9134954576805,6.0229671388697,4.75979933595425,3.2382191498269,6.49776417447669,11.2006721774334,9.55022056895913,3.57903677413921,3.37721805983729,6.00677276667578,12.2533775205712,3.84979432242953,2.54805239706646,7.11066703153331,3.89683873820185,2.78695852022608,2.52762222507392,10.2765491747154,13.7237078333001,7.71899123137089,8.84775166507293,10.3518262626128,8.76338889573022,9.3448037142626,8.70156432804216,6.1576629751541,6.42706916109372,6.2177723475562,7.07688441559899,8.8971767471075,7.06692859073259,7.27312879702833,7.45567044872489,24.3008061519584,17.3840766655168,8.17462576667492,17.3731930533584,19.196887391789,17.4086211090099,11.5338792341713,14.1825186873774,24.5025986620086,16.6871347384585,16.8772201838018,12.259494629014,12.9793010454206,10.6931332042832,7.34001126599549,6.82351447770922,9.04899980311838,11.1903580947925,14.0240283704418,12.4242869565691,11.3028613376786,14.6958838166868,16.1423287558911,15.7418897260344,12.6764651662118,15.7364634840975,17.9650776159428,15.1317966780996,12.2749610159442,14.4584569597311,10.447564995665,8.0255033199098,12.3401245427466,37.9195121149147,23.6760074545538,16.4814829649444,7.24940203874257,7.03578179943289,12.9644684251931,8.28606574548236,11.0187969778546,10.3358965634543,9.76642567951713,11.5357562601836,10.7424114977796,9.37991144506839,10.6708851651412,8.67436262140656,6.28659945928929,12.2948064562988,6.03928884421673,16.4026159880019,25.9319623195797,5.94753809370836,11.3713743665324,15.9966187901425,10.9151235774406,13.5310834388198,8.26902450955704,10.229390016864,8.17970192284004,8.54152310780121,9.0584425098206,9.55073793441024,9.35095418593409,11.8928093142663,8.98819408654222,8.86166004486246,7.96565093017469,10.6214024533726,11.6533482861923,5.63538678365402,12.8300336542548,10.4734343070518,9.60860732497364,8.85311519739602,8.70899873079653,6.43694784149637,8.14421281883883,10.3758419480502,15.5165948315967,15.3316016188298,12.1425540687821,8.52012509831712,8.68237775108701,9.16653066413111,7.76779571117189,9.07957269940198,10.7078951143352,5.75072826109418,10.0478055870496,9.04909252032226,9.09283960609602,6.63770430031075,8.20153986317724,10.3461786493299,12.127450353311,13.6890580211302,14.9375675482166,12.9079636558676,9.88286918906713,11.1880511216426,11.9031525193257,15.2906089783005,13.9522754478728,8.77001227616179,8.84861899464985,8.11619414769709,9.40218880779825,10.5553898757491,11.9659250440116,12.7858710984949,9.93372286697037,12.0412942490844,15.1203075703942,5.24591825205361,6.31177318010932,16.7219356290616,8.58965237452605,10.5557464889071,9.79772071605463,8.46634961513098,11.889214293131,6.47697122679831,8.47541987942804,11.0680577825027,16.3873871375122,7.2389443456217,9.43747699436453,11.0763132360432,9.23832688646199,11.9470624505967,13.352934988524,11.4882951646605,11.3163047853539,6.496641643377,12.604841065701,12.4045580720746,13.8142817201452,12.1209108650805,10.1131762539461,11.5960469432499,14.4389760547462,8.5109901438447,13.5045820523483,9.05510786479281,9.43082954139006,8.15765074754458,7.13475270408282,5.43011767986999,5.78483403317739,7.74416636610244,4.2366414172764,11.467476698858,7.91454014119104,8.88054346827481,11.6403945111341,9.19167048824151,12.4747083806247,10.4933101186746,12.0526446306831,9.7396402054776,11.7640514739037,14.4451731348375,11.1137389632768,10.2520670790769,8.46479240864134,15.6380155594347,14.5549510416604,16.9985967779441,5.72802370809068,13.91878371757,11.5892096262304,1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| |phase1_expression=13.1322054625931,4.88565570695105,4.09499315450582,3.0246421130683,2.50447864973174,7.05092942029937,5.60670337429262,13.2997023144824,45.8971234214434,33.7052917903671,43.1469279928273,34.860433480962,15.2368649638773,16.3476152523525,16.3223783289675,11.3386149738303,11.8925519281785,11.3566379528966,17.0021897671116,14.004858509335,23.0467316309399,6.7517846816602,10.9703911438353,8.47959840805055,6.8822784320151,3.44539178469012,3.87685796543167,6.24866574789078,6.84084310042946,7.30887376303799,11.0865255327652,28.5763803056834,17.221814052368,0,11.2652131702997,15.4598220183398,11.2293145944303,2.09265815368454,3.1253413780952,4.18818995179039,1.17646297606203,2.04913645487534,1.94204141212461,8.56098362233926,8.81979301609777,8.25960384727567,3.9119567217402,6.1047043786525,3.51497892375155,5.63846707315422,4.89952475688769,5.75010257459886,8.89247812106003,3.62681071005672,6.38578218370682,3.8588915405392,3.43840127926508,5.67239301505187,17.601532094785,23.2756030879694,11.4089652631112,6.09920157724438,0.889294796111139,4.04954872776629,2.96659908770092,3.5524005747305,2.09720077362883,3.45796474789399,16.6940275816649,23.7610451463776,20.1911962897327,9.71213346972932,14.1355866209033,23.3957426500562,20.3192398558661,24.8189072384706,8.8092704799511,9.44886301830389,9.98442466165583,21.6293511877518,24.5186884854458,19.7947080811569,10.0505879640497,12.9435400307286,7.79271063661732,13.5529149317887,17.3693450574906,22.3679334990361,9.08714319998209,4.76100828672749,13.9134954576805,6.0229671388697,4.75979933595425,3.2382191498269,6.49776417447669,11.2006721774334,9.55022056895913,3.57903677413921,3.37721805983729,6.00677276667578,12.2533775205712,3.84979432242953,2.54805239706646,7.11066703153331,3.89683873820185,2.78695852022608,2.52762222507392,10.2765491747154,13.7237078333001,7.71899123137089,8.84775166507293,10.3518262626128,8.76338889573022,9.3448037142626,8.70156432804216,6.1576629751541,6.42706916109372,6.2177723475562,7.07688441559899,8.8971767471075,7.06692859073259,7.27312879702833,7.45567044872489,24.3008061519584,17.3840766655168,8.17462576667492,17.3731930533584,19.196887391789,17.4086211090099,11.5338792341713,14.1825186873774,24.5025986620086,16.6871347384585,16.8772201838018,12.259494629014,12.9793010454206,10.6931332042832,7.34001126599549,6.82351447770922,9.04899980311838,11.1903580947925,14.0240283704418,12.4242869565691,11.3028613376786,14.6958838166868,16.1423287558911,15.7418897260344,12.6764651662118,15.7364634840975,17.9650776159428,15.1317966780996,12.2749610159442,14.4584569597311,10.447564995665,8.0255033199098,12.3401245427466,37.9195121149147,23.6760074545538,16.4814829649444,7.24940203874257,7.03578179943289,12.9644684251931,8.28606574548236,11.0187969778546,10.3358965634543,9.76642567951713,11.5357562601836,10.7424114977796,9.37991144506839,10.6708851651412,8.67436262140656,6.28659945928929,12.2948064562988,6.03928884421673,16.4026159880019,25.9319623195797,5.94753809370836,11.3713743665324,15.9966187901425,10.9151235774406,13.5310834388198,8.26902450955704,10.229390016864,8.17970192284004,8.54152310780121,9.0584425098206,9.55073793441024,9.35095418593409,11.8928093142663,8.98819408654222,8.86166004486246,7.96565093017469,10.6214024533726,11.6533482861923,5.63538678365402,12.8300336542548,10.4734343070518,9.60860732497364,8.85311519739602,8.70899873079653,6.43694784149637,8.14421281883883,10.3758419480502,15.5165948315967,15.3316016188298,12.1425540687821,8.52012509831712,8.68237775108701,9.16653066413111,7.76779571117189,9.07957269940198,10.7078951143352,5.75072826109418,10.0478055870496,9.04909252032226,9.09283960609602,6.63770430031075,8.20153986317724,10.3461786493299,12.127450353311,13.6890580211302,14.9375675482166,12.9079636558676,9.88286918906713,11.1880511216426,11.9031525193257,15.2906089783005,13.9522754478728,8.77001227616179,8.84861899464985,8.11619414769709,9.40218880779825,10.5553898757491,11.9659250440116,12.7858710984949,9.93372286697037,12.0412942490844,15.1203075703942,5.24591825205361,6.31177318010932,16.7219356290616,8.58965237452605,10.5557464889071,9.79772071605463,8.46634961513098,11.889214293131,6.47697122679831,8.47541987942804,11.0680577825027,16.3873871375122,7.2389443456217,9.43747699436453,11.0763132360432,9.23832688646199,11.9470624505967,13.352934988524,11.4882951646605,11.3163047853539,6.496641643377,12.604841065701,12.4045580720746,13.8142817201452,12.1209108650805,10.1131762539461,11.5960469432499,14.4389760547462,8.5109901438447,13.5045820523483,9.05510786479281,9.43082954139006,8.15765074754458,7.13475270408282,5.43011767986999,5.78483403317739,7.74416636610244,4.2366414172764,11.467476698858,7.91454014119104,8.88054346827481,11.6403945111341,9.19167048824151,12.4747083806247,10.4933101186746,12.0526446306831,9.7396402054776,11.7640514739037,14.4451731348375,11.1137389632768,10.2520670790769,8.46479240864134,15.6380155594347,14.5549510416604,16.9985967779441,5.72802370809068,13.91878371757,11.5892096262304,1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| ||
|short_description=p1@Ercc8 | |short_description=p1@Ercc8 | ||
}} | }} |
Latest revision as of 02:14, 27 September 2015
Short description: | p1@Ercc8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ercc8_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000022205, ENSMUST00000054835, ENSMUST00000120672, ENSMUST00000123657, ENSMUST00000129117, ENSMUST00000137425, ENSMUST00000152634, NM_028042, uc007ruw.1, uc007rux.1, uc007ruy.1, uc007ruz.1_5end |
EntrezGene: | Ercc8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 1.40e-08 | 34 |
neurectoderm | 9.70e-08 | 64 |
neural plate | 9.70e-08 | 64 |
presumptive neural plate | 9.70e-08 | 64 |
ecto-epithelium | 1.21e-07 | 73 |
brain grey matter | 2.21e-07 | 29 |
regional part of telencephalon | 2.21e-07 | 29 |
telencephalon | 2.21e-07 | 29 |