FFCP PHASE1:Mm9::chr8:121970741..121970752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=117148 | |EntrezGene=117148 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q91ZP9 | |UniProt=Q91ZP9 | ||
|association_with_transcript=122bp_to_ENSMUST00000098363,NM_054095,uc009npq.1_5end | |||
|cluster_id=chr8:121970741..121970752,+ | |||
|description=CAGE_peak_5_at_Necab2_5end | |||
|id=chr8:121970741..121970752,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.29e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.65e-25!71;UBERON:0003075!4.65e-25!71;UBERON:0007284!4.65e-25!71;UBERON:0004121!1.49e-23!102;UBERON:0000924!1.49e-23!102;UBERON:0006601!1.49e-23!102;UBERON:0000033!8.15e-22!63;UBERON:0003056!4.49e-19!49;UBERON:0001017!9.02e-14!73;UBERON:0005743!9.02e-14!73;UBERON:0000073!1.05e-13!75;UBERON:0001016!1.05e-13!75;UBERON:0000955!1.17e-13!50;UBERON:0006238!1.17e-13!50;UBERON:0002616!7.85e-13!49;UBERON:0001049!4.48e-12!52;UBERON:0005068!4.48e-12!52;UBERON:0006241!4.48e-12!52;UBERON:0007135!4.48e-12!52;UBERON:0007811!6.07e-12!86;UBERON:0003080!3.77e-11!40;UBERON:0000970!9.30e-11!9;UBERON:0000019!9.30e-11!9;UBERON:0000047!9.30e-11!9;UBERON:0004088!9.30e-11!9;UBERON:0002104!9.30e-11!9;UBERON:0001456!9.30e-11!9;UBERON:0003072!9.30e-11!9;UBERON:0003071!9.30e-11!9;UBERON:0004128!9.30e-11!9;UBERON:0000020!1.62e-10!12;UBERON:0001032!1.62e-10!12;UBERON:0004456!1.62e-10!12;UBERON:0000153!1.82e-10!94;UBERON:0002780!2.07e-10!39;UBERON:0001890!2.07e-10!39;UBERON:0006240!2.07e-10!39;UBERON:0005085!2.06e-09!13;UBERON:0001444!3.08e-08!11;UBERON:0002420!8.12e-08!8;UBERON:0007245!8.12e-08!8;UBERON:0010009!8.12e-08!8;UBERON:0010011!8.12e-08!8;UBERON:0000454!8.12e-08!8;UBERON:0002369!2.48e-07!7;UBERON:0006858!2.48e-07!7;UBERON:0002020!2.59e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.37e-28,9;UBERON:0000019,1.37e-28,9;UBERON:0000047,1.37e-28,9;UBERON:0010312,1.37e-28,9;UBERON:0004088,1.37e-28,9;UBERON:0002104,1.37e-28,9;UBERON:0001456,1.37e-28,9;UBERON:0003072,1.37e-28,9;UBERON:0004128,1.37e-28,9;UBERON:0003071,1.37e-28,9;UBERON:0001444,2.73e-23,11;UBERON:0000020,2.67e-21,12;UBERON:0001032,2.67e-21,12;UBERON:0004456,2.67e-21,12;UBERON:0000033,1.29e-19,13;UBERON:0005085,1.29e-19,13;UBERON:0003056,5.31e-19,49;UBERON:0002346,4.22e-14,64;UBERON:0003075,4.22e-14,64;UBERON:0007284,4.22e-14,64;UBERON:0010371,4.03e-12,73;UBERON:0004121,4.60e-12,95;UBERON:0000924,4.60e-12,95;UBERON:0006601,4.60e-12,95;UBERON:0010314,8.28e-11,92;UBERON:0000369,1.25e-09,5;UBERON:0002435,1.25e-09,5;UBERON:0000204,1.25e-09,5;UBERON:0010082,1.25e-09,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,0,1.91531007127782,0.614426133024974,1.18697658957174,1.46380229763855,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0.867426633830679,0.913396434936424,0.691846491768175,1.95939432718409,0.587943535678524,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,2.49345653471472,1.46017136760982,0.101839363850316,0,0,0.631325567659422,3.513251959993,2.06911893990126,2.16074555766419,1.35634336052144,1.76894897793452,1.5373646434182,0.937017245597288,2.06962696591213,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.358855426437903,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,0,1.91531007127782,0.614426133024974,1.18697658957174,1.46380229763855,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0.867426633830679,0.913396434936424,0.691846491768175,1.95939432718409,0.587943535678524,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,2.49345653471472,1.46017136760982,0.101839363850316,0,0,0.631325567659422,3.513251959993,2.06911893990126,2.16074555766419,1.35634336052144,1.76894897793452,1.5373646434182,0.937017245597288,2.06962696591213,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.358855426437903,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p5@Necab2 | |||
}} | }} |
Latest revision as of 14:51, 1 October 2015
Short description: | p5@Necab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Necab2_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENSMUST00000098363, NM_054095, uc009npq.1_5end |
EntrezGene: | Necab2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.37e-28 | 9 |
camera-type eye | 1.37e-28 | 9 |
simple eye | 1.37e-28 | 9 |
immature eye | 1.37e-28 | 9 |
ocular region | 1.37e-28 | 9 |
visual system | 1.37e-28 | 9 |
face | 1.37e-28 | 9 |
optic cup | 1.37e-28 | 9 |
optic vesicle | 1.37e-28 | 9 |
eye primordium | 1.37e-28 | 9 |
subdivision of head | 2.73e-23 | 11 |
sense organ | 2.67e-21 | 12 |
sensory system | 2.67e-21 | 12 |
entire sense organ system | 2.67e-21 | 12 |
head | 1.29e-19 | 13 |
ectodermal placode | 1.29e-19 | 13 |
pre-chordal neural plate | 5.31e-19 | 49 |
neurectoderm | 4.22e-14 | 64 |
neural plate | 4.22e-14 | 64 |
presumptive neural plate | 4.22e-14 | 64 |
ecto-epithelium | 4.03e-12 | 73 |
ectoderm-derived structure | 4.60e-12 | 95 |
ectoderm | 4.60e-12 | 95 |
presumptive ectoderm | 4.60e-12 | 95 |
structure with developmental contribution from neural crest | 8.28e-11 | 92 |
corpus striatum | 1.25e-09 | 5 |
striatum | 1.25e-09 | 5 |
ventral part of telencephalon | 1.25e-09 | 5 |
future corpus striatum | 1.25e-09 | 5 |