FFCP PHASE1:Mm9::chr6:67326141..67326165,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16162 | |EntrezGene=16162 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=50 | |MCL_coexpression_id=50 | ||
|TSSclassifier=NA | |||
|UniProt=P97378 | |UniProt=P97378 | ||
|association_with_transcript=-10bp_to_NM_008354,uc009cfo.1_5end | |association_with_transcript=-10bp_to_NM_008354,uc009cfo.1_5end | ||
|cluster_id=chr6:67326141..67326165,- | |||
|description=CAGE_peak_1_at_Il12rb2_5end | |description=CAGE_peak_1_at_Il12rb2_5end | ||
|id=chr6:67326141..67326165,- | |id=chr6:67326141..67326165,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.78e-10,19;CL:0000988,3.03e-10,32;CL:0002032,3.03e-10,32;CL:0000037,3.03e-10,32;CL:0000837,3.03e-10,32;CL:0002320,1.17e-07,46;CL:0000134,1.17e-07,46;CL:0000763,9.75e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.78e-12!48;UBERON:0002405!1.89e-11!70;UBERON:0002390!6.06e-11!45;UBERON:0003061!6.06e-11!45 | |ontology_enrichment_uberon=UBERON:0002193!5.78e-12!48;UBERON:0002405!1.89e-11!70;UBERON:0002390!6.06e-11!45;UBERON:0003061!6.06e-11!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.37e-23,48;UBERON:0002405,2.37e-23,48;UBERON:0002390,3.19e-23,45;UBERON:0003061,3.19e-23,45;UBERON:0004177,6.43e-14,29;UBERON:0005057,6.43e-14,29;UBERON:0002370,4.47e-11,23;UBERON:0000974,4.47e-11,23;UBERON:0004807,4.47e-11,23;UBERON:0005058,4.47e-11,23;UBERON:0003351,4.47e-11,23;UBERON:0009113,4.47e-11,23;UBERON:0003295,4.47e-11,23;UBERON:0009722,4.47e-11,23;UBERON:0005562,4.47e-11,23;UBERON:0007690,4.47e-11,23;UBERON:0000077,9.98e-11,35;UBERON:0006562,1.81e-10,24;UBERON:0003408,1.81e-10,24;UBERON:0001557,1.81e-10,24;UBERON:0001042,1.81e-10,24;UBERON:0008814,1.81e-10,24;UBERON:0009145,1.81e-10,24;UBERON:0002371,6.15e-10,16;UBERON:0000065,1.09e-09,41;UBERON:0001004,2.40e-09,42;UBERON:0003081,2.85e-09,87;UBERON:0000072,6.41e-09,27;UBERON:0001474,4.65e-08,22;UBERON:0004765,4.65e-08,22;UBERON:0001434,4.65e-08,22;UBERON:0002384,1.17e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0.333109761815663,1.21485160433896,0,2.36596624018678,2.74228867211478,2.12194825899015,0.510259740906419,38.4255981147426,25.3363795464767,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,1.00812051903972,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0.419959264876088,0,0.335565212115473,2.17608642603403,4.36921938885203,0,0.573066879877513,0.515672092277442,0,0,0,0,0,1.3498495759221,0,1.4209602298922,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.3575153458869,1.92974780784272,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.578397427679647,4.42305275974937,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,1.78819938646014,4.67278985573089,5.99902730993408,5.20987930999565,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,4.91549231119264,4.88961023517959,3.6941254921427,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.438599962275997,0,0,0.210289948564127,0,1.98251269790279,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.786235980452812,0.449724224769707,0.608580364165509,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.757736633841335,0,0.482443521363367,4.98833613449833,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0.945810864637146,1.10732344824387,0.956728611944923,1.47476983244164,1.55416483679306,1.73578870297814,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.220528398054962,4.122156323537,0.807322133479528,0.784068024066026,1.07435109602823,2.29797259643086,0.582961673259701,0,3.2465467351592,1.23832120777933,1.11116716421827,0,0.956859594047176,1.83022538565218,4.9293744698218,6.29781535456461,6.77179871641677,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.523511883968059,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,2.21207784439725,7.9062833963164,5.6491026440655,2.85825810551149,4.65469408735452,2.18549490259391,3.60586348559907,1.77227432609493,1.81739609906666,1.752756553065,1.41156659191577,2.0466154955348,1.25075394132428,1.8700304349051,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.588795680537589,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.423073039458382,0,0,0,0,0.355905054372522,0.197008964751127,1.22769312950907,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.382576664137687,1.10295709559758,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0.333109761815663,1.21485160433896,0,2.36596624018678,2.74228867211478,2.12194825899015,0.510259740906419,38.4255981147426,25.3363795464767,0.319984845586813,0.45881856213434,0,0,0,0.380046838912748,1.00812051903972,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0.419959264876088,0,0.335565212115473,2.17608642603403,4.36921938885203,0,0.573066879877513,0.515672092277442,0,0,0,0,0,1.3498495759221,0,1.4209602298922,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,10.3575153458869,1.92974780784272,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.578397427679647,4.42305275974937,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,1.78819938646014,4.67278985573089,5.99902730993408,5.20987930999565,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,4.91549231119264,4.88961023517959,3.6941254921427,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.438599962275997,0,0,0.210289948564127,0,1.98251269790279,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.786235980452812,0.449724224769707,0.608580364165509,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.757736633841335,0,0.482443521363367,4.98833613449833,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0.945810864637146,1.10732344824387,0.956728611944923,1.47476983244164,1.55416483679306,1.73578870297814,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.220528398054962,4.122156323537,0.807322133479528,0.784068024066026,1.07435109602823,2.29797259643086,0.582961673259701,0,3.2465467351592,1.23832120777933,1.11116716421827,0,0.956859594047176,1.83022538565218,4.9293744698218,6.29781535456461,6.77179871641677,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.523511883968059,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,2.21207784439725,7.9062833963164,5.6491026440655,2.85825810551149,4.65469408735452,2.18549490259391,3.60586348559907,1.77227432609493,1.81739609906666,1.752756553065,1.41156659191577,2.0466154955348,1.25075394132428,1.8700304349051,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.588795680537589,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.423073039458382,0,0,0,0,0.355905054372522,0.197008964751127,1.22769312950907,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.382576664137687,1.10295709559758,0.231867835620421 | ||
|short_description=p1@Il12rb2 | |short_description=p1@Il12rb2 | ||
}} | }} |
Latest revision as of 15:48, 1 October 2015
Short description: | p1@Il12rb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il12rb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -10bp_to_NM_008354, uc009cfo.1_5end |
EntrezGene: | Il12rb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.78e-10 | 19 |
hematopoietic cell | 3.03e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.03e-10 | 32 |
hematopoietic stem cell | 3.03e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.03e-10 | 32 |
connective tissue cell | 1.17e-07 | 46 |
mesenchymal cell | 1.17e-07 | 46 |
myeloid cell | 9.75e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.37e-23 | 48 |
immune system | 2.37e-23 | 48 |
hematopoietic system | 3.19e-23 | 45 |
blood island | 3.19e-23 | 45 |
hemopoietic organ | 6.43e-14 | 29 |
immune organ | 6.43e-14 | 29 |
thymus | 4.47e-11 | 23 |
neck | 4.47e-11 | 23 |
respiratory system epithelium | 4.47e-11 | 23 |
hemolymphoid system gland | 4.47e-11 | 23 |
pharyngeal epithelium | 4.47e-11 | 23 |
thymic region | 4.47e-11 | 23 |
pharyngeal gland | 4.47e-11 | 23 |
entire pharyngeal arch endoderm | 4.47e-11 | 23 |
thymus primordium | 4.47e-11 | 23 |
early pharyngeal endoderm | 4.47e-11 | 23 |
mixed endoderm/mesoderm-derived structure | 9.98e-11 | 35 |
pharynx | 1.81e-10 | 24 |
gland of gut | 1.81e-10 | 24 |
upper respiratory tract | 1.81e-10 | 24 |
chordate pharynx | 1.81e-10 | 24 |
pharyngeal arch system | 1.81e-10 | 24 |
pharyngeal region of foregut | 1.81e-10 | 24 |
bone marrow | 6.15e-10 | 16 |
respiratory tract | 1.09e-09 | 41 |
respiratory system | 2.40e-09 | 42 |
lateral plate mesoderm | 2.85e-09 | 87 |
segment of respiratory tract | 6.41e-09 | 27 |
bone element | 4.65e-08 | 22 |
skeletal element | 4.65e-08 | 22 |
skeletal system | 4.65e-08 | 22 |
connective tissue | 1.17e-07 | 46 |