FFCP PHASE1:Mm9::chr11:54663991..54664026,-: Difference between revisions
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{{FFCP|EntrezGene=75530|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000127887_5end|description=CAGE_peak_2_at_Lyrm7_5end|id=chr11:54663991..54664026,-|ontology_enrichment_celltype=CL:0000838!1.30e-09!12;CL:0000542!1.03e-08!13;CL:0000051!1.03e-08!13;CL:0000084!1.33e-08!11;CL:0000827!1.33e-08!11;CL:0000988!1.27e-07!32;CL:0002032!1.27e-07!32;CL:0000037!1.27e-07!32;CL:0000566!1.27e-07!32;CL:0000837!1.27e-07!32;CL:0002031!9.72e-07!25|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.44e-20!29;UBERON:0002370!3.53e-19!23;UBERON:0000974!3.53e-19!23;UBERON:0004807!3.53e-19!23;UBERON:0005058!3.53e-19!23;UBERON:0003351!3.53e-19!23;UBERON:0009113!3.53e-19!23;UBERON:0003295!3.53e-19!23;UBERON:0009722!3.53e-19!23;UBERON:0005562!3.53e-19!23;UBERON:0007690!3.53e-19!23;UBERON:0006562!3.70e-18!24;UBERON:0003408!3.70e-18!24;UBERON:0001557!3.70e-18!24;UBERON:0001042!3.70e-18!24;UBERON:0008814!3.70e-18!24;UBERON:0009145!3.70e-18!24;UBERON:0000072!1.47e-15!27;UBERON:0002193!8.88e-15!48;UBERON:0002390!1.14e-14!45;UBERON:0003061!1.14e-14!45;UBERON:0000065!1.91e-13!41;UBERON:0001004!5.59e-13!42;UBERON:0000063!7.61e-11!35;UBERON:0005057!7.57e-10!51;UBERON:0003081!3.72e-09!88;UBERON:0002405!5.80e-09!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.27e-39,23;UBERON:0000974,7.27e-39,23;UBERON:0004807,7.27e-39,23;UBERON:0005058,7.27e-39,23;UBERON:0003351,7.27e-39,23;UBERON:0009113,7.27e-39,23;UBERON:0003295,7.27e-39,23;UBERON:0009722,7.27e-39,23;UBERON:0005562,7.27e-39,23;UBERON:0007690,7.27e-39,23;UBERON:0006562,3.67e-37,24;UBERON:0003408,3.67e-37,24;UBERON:0001557,3.67e-37,24;UBERON:0001042,3.67e-37,24;UBERON:0008814,3.67e-37,24;UBERON:0009145,3.67e-37,24;UBERON:0000072,8.29e-33,27;UBERON:0004177,2.10e-30,29;UBERON:0005057,2.10e-30,29;UBERON:0000077,7.77e-25,35;UBERON:0007811,4.35e-24,36;UBERON:0002390,1.18e-21,45;UBERON:0003061,1.18e-21,45;UBERON:0000065,6.83e-21,41;UBERON:0001004,2.41e-20,42;UBERON:0002193,3.67e-20,48;UBERON:0002405,3.67e-20,48;UBERON:0000153,8.05e-20,43;UBERON:0003929,2.48e-17,55;UBERON:0002368,1.07e-15,60;UBERON:0002530,2.61e-14,65;UBERON:0000490,4.67e-14,66;UBERON:0005911,2.41e-13,69;UBERON:0000949,1.09e-12,72;UBERON:0001041,3.49e-11,80;UBERON:0003081,4.48e-10,87;UBERON:0004921,4.03e-07,114;UBERON:0001007,5.90e-07,116;UBERON:0001555,5.90e-07,116;UBERON:0007026,5.90e-07,116;UBERON:0004119,8.54e-07,118;UBERON:0000925,8.54e-07,118;UBERON:0006595,8.54e-07,118|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0.159544317990673,2.05440875917447,0.961624426608971,0,0.202475267389826,0,1.26184866143295,0.411343300817216,0,0,2.97872853602656,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0.457556346413045,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,6.32022241256356,0.810900861160657,1.84879722896689,3.11809975146708,4.833720783022,6.35780335300048,7.93289966831794,8.27061352177632,7.87538309595551,13.945845617865,7.86444244067356,6.04238860586465,8.178006539428,17.9990429359616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p2@Lyrm7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75530 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENSMUST00000127887_5end | |||
|cluster_id=chr11:54663991..54664026,- | |||
|description=CAGE_peak_2_at_Lyrm7_5end | |||
|id=chr11:54663991..54664026,- | |||
|ontology_enrichment_celltype=CL:0000838!1.30e-09!12;CL:0000542!1.03e-08!13;CL:0000051!1.03e-08!13;CL:0000084!1.33e-08!11;CL:0000827!1.33e-08!11;CL:0000988!1.27e-07!32;CL:0002032!1.27e-07!32;CL:0000037!1.27e-07!32;CL:0000566!1.27e-07!32;CL:0000837!1.27e-07!32;CL:0002031!9.72e-07!25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.44e-20!29;UBERON:0002370!3.53e-19!23;UBERON:0000974!3.53e-19!23;UBERON:0004807!3.53e-19!23;UBERON:0005058!3.53e-19!23;UBERON:0003351!3.53e-19!23;UBERON:0009113!3.53e-19!23;UBERON:0003295!3.53e-19!23;UBERON:0009722!3.53e-19!23;UBERON:0005562!3.53e-19!23;UBERON:0007690!3.53e-19!23;UBERON:0006562!3.70e-18!24;UBERON:0003408!3.70e-18!24;UBERON:0001557!3.70e-18!24;UBERON:0001042!3.70e-18!24;UBERON:0008814!3.70e-18!24;UBERON:0009145!3.70e-18!24;UBERON:0000072!1.47e-15!27;UBERON:0002193!8.88e-15!48;UBERON:0002390!1.14e-14!45;UBERON:0003061!1.14e-14!45;UBERON:0000065!1.91e-13!41;UBERON:0001004!5.59e-13!42;UBERON:0000063!7.61e-11!35;UBERON:0005057!7.57e-10!51;UBERON:0003081!3.72e-09!88;UBERON:0002405!5.80e-09!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.27e-39,23;UBERON:0000974,7.27e-39,23;UBERON:0004807,7.27e-39,23;UBERON:0005058,7.27e-39,23;UBERON:0003351,7.27e-39,23;UBERON:0009113,7.27e-39,23;UBERON:0003295,7.27e-39,23;UBERON:0009722,7.27e-39,23;UBERON:0005562,7.27e-39,23;UBERON:0007690,7.27e-39,23;UBERON:0006562,3.67e-37,24;UBERON:0003408,3.67e-37,24;UBERON:0001557,3.67e-37,24;UBERON:0001042,3.67e-37,24;UBERON:0008814,3.67e-37,24;UBERON:0009145,3.67e-37,24;UBERON:0000072,8.29e-33,27;UBERON:0004177,2.10e-30,29;UBERON:0005057,2.10e-30,29;UBERON:0000077,7.77e-25,35;UBERON:0007811,4.35e-24,36;UBERON:0002390,1.18e-21,45;UBERON:0003061,1.18e-21,45;UBERON:0000065,6.83e-21,41;UBERON:0001004,2.41e-20,42;UBERON:0002193,3.67e-20,48;UBERON:0002405,3.67e-20,48;UBERON:0000153,8.05e-20,43;UBERON:0003929,2.48e-17,55;UBERON:0002368,1.07e-15,60;UBERON:0002530,2.61e-14,65;UBERON:0000490,4.67e-14,66;UBERON:0005911,2.41e-13,69;UBERON:0000949,1.09e-12,72;UBERON:0001041,3.49e-11,80;UBERON:0003081,4.48e-10,87;UBERON:0004921,4.03e-07,114;UBERON:0001007,5.90e-07,116;UBERON:0001555,5.90e-07,116;UBERON:0007026,5.90e-07,116;UBERON:0004119,8.54e-07,118;UBERON:0000925,8.54e-07,118;UBERON:0006595,8.54e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0.159544317990673,2.05440875917447,0.961624426608971,0,0.202475267389826,0,1.26184866143295,0.411343300817216,0,0,2.97872853602656,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0.457556346413045,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,6.32022241256356,0.810900861160657,1.84879722896689,3.11809975146708,4.833720783022,6.35780335300048,7.93289966831794,8.27061352177632,7.87538309595551,13.945845617865,7.86444244067356,6.04238860586465,8.178006539428,17.9990429359616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p2@Lyrm7 | |||
}} |
Latest revision as of 17:12, 1 October 2015
Short description: | p2@Lyrm7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lyrm7_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -3bp_to_ENSMUST00000127887_5end |
EntrezGene: | Lyrm7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data