FFCP PHASE1:Mm9::chrX:156065466..156065478,+: Difference between revisions
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{{FFCP|EntrezGene=58194|HGNC=|MCL_coexpression_id=36|UniProt=Q8R550|association_with_transcript=0bp_to_ENSMUST00000073094,ENSMUST00000150433_5end|description=CAGE_peak_13_at_Sh3kbp1_5end|id=chrX:156065466..156065478,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,4.46e-09,32;CL:0002032,4.46e-09,32;CL:0000037,4.46e-09,32;CL:0000837,4.46e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.75e-12!45;UBERON:0003061!8.75e-12!45;UBERON:0002193!1.33e-11!48;UBERON:0004177!2.05e-09!29;UBERON:0000065!1.06e-08!41;UBERON:0002370!3.52e-08!23;UBERON:0000974!3.52e-08!23;UBERON:0004807!3.52e-08!23;UBERON:0005058!3.52e-08!23;UBERON:0003351!3.52e-08!23;UBERON:0009113!3.52e-08!23;UBERON:0003295!3.52e-08!23;UBERON:0009722!3.52e-08!23;UBERON:0005562!3.52e-08!23;UBERON:0007690!3.52e-08!23;UBERON:0001004!5.24e-08!42;UBERON:0006562!2.95e-07!24;UBERON:0003408!2.95e-07!24;UBERON:0001557!2.95e-07!24;UBERON:0001042!2.95e-07!24;UBERON:0008814!2.95e-07!24;UBERON:0009145!2.95e-07!24;UBERON:0000072!4.04e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.78e-13,45;UBERON:0003061,2.78e-13,45;UBERON:0002193,3.16e-13,48;UBERON:0002405,3.16e-13,48;UBERON:0002370,9.00e-13,23;UBERON:0000974,9.00e-13,23;UBERON:0004807,9.00e-13,23;UBERON:0005058,9.00e-13,23;UBERON:0003351,9.00e-13,23;UBERON:0009113,9.00e-13,23;UBERON:0003295,9.00e-13,23;UBERON:0009722,9.00e-13,23;UBERON:0005562,9.00e-13,23;UBERON:0007690,9.00e-13,23;UBERON:0006562,5.40e-12,24;UBERON:0003408,5.40e-12,24;UBERON:0001557,5.40e-12,24;UBERON:0001042,5.40e-12,24;UBERON:0008814,5.40e-12,24;UBERON:0009145,5.40e-12,24;UBERON:0000072,2.78e-11,27;UBERON:0004177,3.52e-11,29;UBERON:0005057,3.52e-11,29;UBERON:0000065,5.64e-11,41;UBERON:0001004,1.57e-10,42;UBERON:0000077,3.25e-08,35;UBERON:0003081,9.99e-07,87|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.467225281191051,2.06597317506522,1.40788722151667,1.40438715793196,0.34243593645101,1.11681022593471,1.19840510951844,2.62261207256992,0.666219523631325,0.809901069559304,0.699561878128147,4.25873923233621,3.29074640653773,2.12194825899015,0.595303031057488,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,1.29228598847722,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0,0,7.53356935326434,5.4693474116666,6.80580867165938,9.41170380849623,11.6117732442936,10.6812277666854,0.503587271902309,0.405507724878058,0,0,0,0,0,0.279972843250725,0,2.51673909086605,3.62681071005672,2.35265659399725,0.257259436035947,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0.725827286159344,0.945041568321835,1.26194976810829,0.856952953211411,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.510749352340751,0.46081959976873,0.527545150920775,0.640413505216868,0,0,0.56276261003168,0.916789486660861,1.17851434189467,1.28134512719193,0.745597783301202,0.302904773332736,1.058001841495,0.289864488701678,0,0,0,0,0,0.561777680527007,1.53387290320252,0.519572009205738,1.06001872353102,0.281686839553361,0,2.54805239706646,7.11066703153331,0.432982082022428,0.506719730950197,1.51657333504435,0.68510327831436,6.99132285847364,1.48442139064825,0,0.304465478312141,0.230615497256059,0,0.823120949949934,0.251333182659351,0.247194967734374,5.63937491987655,4.42305275974937,1.13236794963186,2.42925670306433,1.93950101254089,0,0.292780797011547,0.209446706813455,0.255457055208591,1.91704199209472,1.79970819298022,1.90605340609597,0.748953197024114,3.20250421973039,0.628271760564322,0.869121600961382,0.255715457330331,0.62336413367868,0.811206315338788,1.12023300235348,1.36847667671102,0.252722758433675,0.631325567659422,0.390361328888111,0.919608417733892,0.360124259610698,0.452114453507145,0.680364991513279,0.2562274405697,0.0937017245597288,0.776110112217047,0,0.189106080167819,0.527853372491847,0.657587197282725,0,0.348252166522167,0.823128545631774,0.796137067273973,2.80885274925294,1.80143534980301,2.84163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0.617068451549513,0,0.804820204198858,0.350296027101508,0,0.32833492815819,0.405344047729279,0.292399974850665,0.219550115291051,0.402619256281115,0.841159794256509,1.44066457330998,0,0,0.639864751605702,0.928946687441754,0.515469845288373,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,0.164698954724011,0,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.685491075658373,0,0.814605311381257,0.581857461502877,1.1221731182451,1.26473074248515,0.590440591918409,0.627994911365499,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0.744281895337007,0,0.505157755894224,0.358794827043824,0.964887042726734,1.29327233116623,0.37898282354097,0.325929952884052,0.848725428875941,0.704070744865506,1.50755631697634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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58194 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R550 | |||
|association_with_transcript=0bp_to_ENSMUST00000073094,ENSMUST00000150433_5end | |||
|cluster_id=chrX:156065466..156065478,+ | |||
|description=CAGE_peak_13_at_Sh3kbp1_5end | |||
|id=chrX:156065466..156065478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.46e-09,32;CL:0002032,4.46e-09,32;CL:0000037,4.46e-09,32;CL:0000837,4.46e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.75e-12!45;UBERON:0003061!8.75e-12!45;UBERON:0002193!1.33e-11!48;UBERON:0004177!2.05e-09!29;UBERON:0000065!1.06e-08!41;UBERON:0002370!3.52e-08!23;UBERON:0000974!3.52e-08!23;UBERON:0004807!3.52e-08!23;UBERON:0005058!3.52e-08!23;UBERON:0003351!3.52e-08!23;UBERON:0009113!3.52e-08!23;UBERON:0003295!3.52e-08!23;UBERON:0009722!3.52e-08!23;UBERON:0005562!3.52e-08!23;UBERON:0007690!3.52e-08!23;UBERON:0001004!5.24e-08!42;UBERON:0006562!2.95e-07!24;UBERON:0003408!2.95e-07!24;UBERON:0001557!2.95e-07!24;UBERON:0001042!2.95e-07!24;UBERON:0008814!2.95e-07!24;UBERON:0009145!2.95e-07!24;UBERON:0000072!4.04e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.78e-13,45;UBERON:0003061,2.78e-13,45;UBERON:0002193,3.16e-13,48;UBERON:0002405,3.16e-13,48;UBERON:0002370,9.00e-13,23;UBERON:0000974,9.00e-13,23;UBERON:0004807,9.00e-13,23;UBERON:0005058,9.00e-13,23;UBERON:0003351,9.00e-13,23;UBERON:0009113,9.00e-13,23;UBERON:0003295,9.00e-13,23;UBERON:0009722,9.00e-13,23;UBERON:0005562,9.00e-13,23;UBERON:0007690,9.00e-13,23;UBERON:0006562,5.40e-12,24;UBERON:0003408,5.40e-12,24;UBERON:0001557,5.40e-12,24;UBERON:0001042,5.40e-12,24;UBERON:0008814,5.40e-12,24;UBERON:0009145,5.40e-12,24;UBERON:0000072,2.78e-11,27;UBERON:0004177,3.52e-11,29;UBERON:0005057,3.52e-11,29;UBERON:0000065,5.64e-11,41;UBERON:0001004,1.57e-10,42;UBERON:0000077,3.25e-08,35;UBERON:0003081,9.99e-07,87 | |||
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| |||
|short_description=p13@Sh3kbp1 | |||
}} |
Latest revision as of 17:32, 1 October 2015
Short description: | p13@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000073094, ENSMUST00000150433_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.46e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.46e-09 | 32 |
hematopoietic stem cell | 4.46e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.46e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.78e-13 | 45 |
blood island | 2.78e-13 | 45 |
hemolymphoid system | 3.16e-13 | 48 |
immune system | 3.16e-13 | 48 |
thymus | 9.00e-13 | 23 |
neck | 9.00e-13 | 23 |
respiratory system epithelium | 9.00e-13 | 23 |
hemolymphoid system gland | 9.00e-13 | 23 |
pharyngeal epithelium | 9.00e-13 | 23 |
thymic region | 9.00e-13 | 23 |
pharyngeal gland | 9.00e-13 | 23 |
entire pharyngeal arch endoderm | 9.00e-13 | 23 |
thymus primordium | 9.00e-13 | 23 |
early pharyngeal endoderm | 9.00e-13 | 23 |
pharynx | 5.40e-12 | 24 |
gland of gut | 5.40e-12 | 24 |
upper respiratory tract | 5.40e-12 | 24 |
chordate pharynx | 5.40e-12 | 24 |
pharyngeal arch system | 5.40e-12 | 24 |
pharyngeal region of foregut | 5.40e-12 | 24 |
segment of respiratory tract | 2.78e-11 | 27 |
hemopoietic organ | 3.52e-11 | 29 |
immune organ | 3.52e-11 | 29 |
respiratory tract | 5.64e-11 | 41 |
respiratory system | 1.57e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 3.25e-08 | 35 |
lateral plate mesoderm | 9.99e-07 | 87 |