FFCP PHASE1:Mm9::chr18:75160169..75160213,+: Difference between revisions
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{{FFCP|EntrezGene=100042880,319195|HGNC=|MCL_coexpression_id=155|UniProt=Q6ZWZ7|association_with_transcript=38bp_to_ENSMUST00000079716,NM_001002239,uc008fpw.2_5end|description=CAGE_peak_1_at_Gm10294_5end,CAGE_peak_1_at_Rpl17_5end|id=chr18:75160169..75160213,+|ontology_enrichment_celltype=CL:0000063!8.53e-14!66;CL:0000988!9.63e-12!32;CL:0002032!9.63e-12!32;CL:0000037!9.63e-12!32;CL:0000566!9.63e-12!32;CL:0000837!9.63e-12!32;CL:0002031!3.09e-09!25;CL:0000542!6.11e-09!13;CL:0000051!6.11e-09!13;CL:0000838!9.76e-09!12;CL:0000084!4.55e-08!11;CL:0000827!4.55e-08!11;CL:0000791!2.21e-07!9;CL:0000789!2.21e-07!9;CL:0002420!2.21e-07!9;CL:0002419!2.21e-07!9;CL:0000790!2.21e-07!9;CL:0000144!3.79e-07!121;CL:0000012!3.79e-07!121;CL:0002320!5.05e-07!46;CL:0000134!5.05e-07!46;CL:0000066!7.78e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,9.63e-12,32;CL:0002032,9.63e-12,32;CL:0000037,9.63e-12,32;CL:0000837,9.63e-12,32;CL:0002031,3.09e-09,25;CL:0000542,6.11e-09,13;CL:0000051,6.11e-09,13;CL:0000838,9.76e-09,12;CL:0000084,4.55e-08,11;CL:0000827,4.55e-08,11;CL:0000791,2.21e-07,9;CL:0000789,2.21e-07,9;CL:0002420,2.21e-07,9;CL:0002419,2.21e-07,9;CL:0000790,2.21e-07,9;CL:0002320,5.05e-07,46;CL:0000134,5.05e-07,46;CL:0000066,7.78e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.86e-10!29;UBERON:0002193!5.61e-10!48;UBERON:0002370!2.87e-09!23;UBERON:0000974!2.87e-09!23;UBERON:0004807!2.87e-09!23;UBERON:0005058!2.87e-09!23;UBERON:0003351!2.87e-09!23;UBERON:0009113!2.87e-09!23;UBERON:0003295!2.87e-09!23;UBERON:0009722!2.87e-09!23;UBERON:0005562!2.87e-09!23;UBERON:0007690!2.87e-09!23;UBERON:0002390!3.68e-09!45;UBERON:0003061!3.68e-09!45;UBERON:0003408!1.57e-08!24;UBERON:0006562!2.01e-08!24;UBERON:0001557!2.01e-08!24;UBERON:0001042!2.01e-08!24;UBERON:0008814!2.01e-08!24;UBERON:0009145!2.01e-08!24;UBERON:0000072!2.96e-08!27;UBERON:0003929!6.07e-08!55;UBERON:0002405!2.30e-07!70;UBERON:0000490!4.57e-07!66;UBERON:0002384!5.05e-07!46;UBERON:0001007!8.41e-07!128;UBERON:0001555!8.41e-07!128;UBERON:0007026!8.41e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.86e-10,29;UBERON:0005057,1.86e-10,29;UBERON:0002193,5.61e-10,48;UBERON:0002405,5.61e-10,48;UBERON:0002370,2.87e-09,23;UBERON:0000974,2.87e-09,23;UBERON:0004807,2.87e-09,23;UBERON:0005058,2.87e-09,23;UBERON:0003351,2.87e-09,23;UBERON:0009113,2.87e-09,23;UBERON:0003295,2.87e-09,23;UBERON:0009722,2.87e-09,23;UBERON:0005562,2.87e-09,23;UBERON:0007690,2.87e-09,23;UBERON:0002390,3.68e-09,45;UBERON:0003061,3.68e-09,45;UBERON:0003408,1.57e-08,24;UBERON:0000153,1.60e-08,43;UBERON:0000077,1.70e-08,35;UBERON:0006562,2.01e-08,24;UBERON:0001557,2.01e-08,24;UBERON:0001042,2.01e-08,24;UBERON:0008814,2.01e-08,24;UBERON:0009145,2.01e-08,24;UBERON:0000072,2.96e-08,27;UBERON:0003929,6.07e-08,55;UBERON:0007811,1.06e-07,36;UBERON:0000490,4.57e-07,66;UBERON:0002384,5.05e-07,46|phase1_expression=26.9050063136054,25.8241801653127,27.2999543633722,30.5488853419898,35.0627010962443,40.6267838026773,36.2099592923065,50.2289728187732,89.2600498441567,140.672780319518,55.3034037368381,83.5214504681172,30.4737299277546,50.3541517933425,18.3210368998615,25.7143589585079,16.7894850750755,22.8710069884722,21.9383093769182,21.6438722416995,10.7154545590348,22.8369187762036,22.4631818659484,23.6788785734242,28.6761601333963,20.6723507081407,24.9841957772263,29.5195588779668,17.4821545899864,15.8778981748756,40.5766834499208,74.9336194682365,65.1968674839644,79.2408405077194,23.108129580102,16.2909952451323,19.8044275574498,18.4153917524239,11.720030167857,10.9939986234498,17.6469446409304,12.294818729252,14.0798002379035,15.1076181570693,15.0037858204882,17.2533947031981,17.2126095756569,7.63088047331563,16.9158360705543,12.8323733389027,7.27929392451885,8.62515386189829,81.8779117561753,95.0224406034861,89.7370443710379,9.51859913333004,9.45560351797897,12.8918023069361,12.9482534950143,11.6378015439847,15.2119536841483,12.876092218627,8.89294796111139,7.19919773825119,7.9109309005358,11.3676818391376,7.19040265244171,11.9107674649682,10.6800300677732,10.5304631898719,10.5162480675691,9.71213346972932,17.6694832761291,7.83941114975706,10.0637744569148,10.1114066527102,16.5173821499083,8.2996769755372,6.91229399653096,12.1335384711778,15.8273623432169,12.5019208933622,4.4669279840221,9.56696437053856,9.16789486660861,15.6153150301044,13.810053037513,19.199142920006,28.7002272732768,15.1898835814639,21.7398366526258,1.72084775396277,31.2786813505565,17.2705021324101,3.24888208723835,2.68816132258401,9.26933172869562,18.9177658061644,17.4056623083922,17.3136391510067,23.5208511027056,17.9657068380045,30.5766287647975,28.4426681261332,16.2368280758411,16.9751109868316,16.6823066854878,12.7885945285347,15.7952109024775,11.1331604298619,14.052311468057,16.4411358288556,11.3001593655469,13.1128697280782,14.2282335634203,8.54532821041793,9.39340877390621,6.79616977523585,11.4999371753484,9.05894359705491,8.83366073841574,13.5765070877862,5.59175283654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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100042880,319195 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZWZ7 | |||
|association_with_transcript=38bp_to_ENSMUST00000079716,NM_001002239,uc008fpw.2_5end | |||
|cluster_id=chr18:75160169..75160213,+ | |||
|description=CAGE_peak_1_at_Gm10294_5end,CAGE_peak_1_at_Rpl17_5end | |||
|id=chr18:75160169..75160213,+ | |||
|ontology_enrichment_celltype=CL:0000063!8.53e-14!66;CL:0000988!9.63e-12!32;CL:0002032!9.63e-12!32;CL:0000037!9.63e-12!32;CL:0000566!9.63e-12!32;CL:0000837!9.63e-12!32;CL:0002031!3.09e-09!25;CL:0000542!6.11e-09!13;CL:0000051!6.11e-09!13;CL:0000838!9.76e-09!12;CL:0000084!4.55e-08!11;CL:0000827!4.55e-08!11;CL:0000791!2.21e-07!9;CL:0000789!2.21e-07!9;CL:0002420!2.21e-07!9;CL:0002419!2.21e-07!9;CL:0000790!2.21e-07!9;CL:0000144!3.79e-07!121;CL:0000012!3.79e-07!121;CL:0002320!5.05e-07!46;CL:0000134!5.05e-07!46;CL:0000066!7.78e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.63e-12,32;CL:0002032,9.63e-12,32;CL:0000037,9.63e-12,32;CL:0000837,9.63e-12,32;CL:0002031,3.09e-09,25;CL:0000542,6.11e-09,13;CL:0000051,6.11e-09,13;CL:0000838,9.76e-09,12;CL:0000084,4.55e-08,11;CL:0000827,4.55e-08,11;CL:0000791,2.21e-07,9;CL:0000789,2.21e-07,9;CL:0002420,2.21e-07,9;CL:0002419,2.21e-07,9;CL:0000790,2.21e-07,9;CL:0002320,5.05e-07,46;CL:0000134,5.05e-07,46;CL:0000066,7.78e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.86e-10!29;UBERON:0002193!5.61e-10!48;UBERON:0002370!2.87e-09!23;UBERON:0000974!2.87e-09!23;UBERON:0004807!2.87e-09!23;UBERON:0005058!2.87e-09!23;UBERON:0003351!2.87e-09!23;UBERON:0009113!2.87e-09!23;UBERON:0003295!2.87e-09!23;UBERON:0009722!2.87e-09!23;UBERON:0005562!2.87e-09!23;UBERON:0007690!2.87e-09!23;UBERON:0002390!3.68e-09!45;UBERON:0003061!3.68e-09!45;UBERON:0003408!1.57e-08!24;UBERON:0006562!2.01e-08!24;UBERON:0001557!2.01e-08!24;UBERON:0001042!2.01e-08!24;UBERON:0008814!2.01e-08!24;UBERON:0009145!2.01e-08!24;UBERON:0000072!2.96e-08!27;UBERON:0003929!6.07e-08!55;UBERON:0002405!2.30e-07!70;UBERON:0000490!4.57e-07!66;UBERON:0002384!5.05e-07!46;UBERON:0001007!8.41e-07!128;UBERON:0001555!8.41e-07!128;UBERON:0007026!8.41e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.86e-10,29;UBERON:0005057,1.86e-10,29;UBERON:0002193,5.61e-10,48;UBERON:0002405,5.61e-10,48;UBERON:0002370,2.87e-09,23;UBERON:0000974,2.87e-09,23;UBERON:0004807,2.87e-09,23;UBERON:0005058,2.87e-09,23;UBERON:0003351,2.87e-09,23;UBERON:0009113,2.87e-09,23;UBERON:0003295,2.87e-09,23;UBERON:0009722,2.87e-09,23;UBERON:0005562,2.87e-09,23;UBERON:0007690,2.87e-09,23;UBERON:0002390,3.68e-09,45;UBERON:0003061,3.68e-09,45;UBERON:0003408,1.57e-08,24;UBERON:0000153,1.60e-08,43;UBERON:0000077,1.70e-08,35;UBERON:0006562,2.01e-08,24;UBERON:0001557,2.01e-08,24;UBERON:0001042,2.01e-08,24;UBERON:0008814,2.01e-08,24;UBERON:0009145,2.01e-08,24;UBERON:0000072,2.96e-08,27;UBERON:0003929,6.07e-08,55;UBERON:0007811,1.06e-07,36;UBERON:0000490,4.57e-07,66;UBERON:0002384,5.05e-07,46 | |||
|phase1_expression=26.9050063136054,25.8241801653127,27.2999543633722,30.5488853419898,35.0627010962443,40.6267838026773,36.2099592923065,50.2289728187732,89.2600498441567,140.672780319518,55.3034037368381,83.5214504681172,30.4737299277546,50.3541517933425,18.3210368998615,25.7143589585079,16.7894850750755,22.8710069884722,21.9383093769182,21.6438722416995,10.7154545590348,22.8369187762036,22.4631818659484,23.6788785734242,28.6761601333963,20.6723507081407,24.9841957772263,29.5195588779668,17.4821545899864,15.8778981748756,40.5766834499208,74.9336194682365,65.1968674839644,79.2408405077194,23.108129580102,16.2909952451323,19.8044275574498,18.4153917524239,11.720030167857,10.9939986234498,17.6469446409304,12.294818729252,14.0798002379035,15.1076181570693,15.0037858204882,17.2533947031981,17.2126095756569,7.63088047331563,16.9158360705543,12.8323733389027,7.27929392451885,8.62515386189829,81.8779117561753,95.0224406034861,89.7370443710379,9.51859913333004,9.45560351797897,12.8918023069361,12.9482534950143,11.6378015439847,15.2119536841483,12.876092218627,8.89294796111139,7.19919773825119,7.9109309005358,11.3676818391376,7.19040265244171,11.9107674649682,10.6800300677732,10.5304631898719,10.5162480675691,9.71213346972932,17.6694832761291,7.83941114975706,10.0637744569148,10.1114066527102,16.5173821499083,8.2996769755372,6.91229399653096,12.1335384711778,15.8273623432169,12.5019208933622,4.4669279840221,9.56696437053856,9.16789486660861,15.6153150301044,13.810053037513,19.199142920006,28.7002272732768,15.1898835814639,21.7398366526258,1.72084775396277,31.2786813505565,17.2705021324101,3.24888208723835,2.68816132258401,9.26933172869562,18.9177658061644,17.4056623083922,17.3136391510067,23.5208511027056,17.9657068380045,30.5766287647975,28.4426681261332,16.2368280758411,16.9751109868316,16.6823066854878,12.7885945285347,15.7952109024775,11.1331604298619,14.052311468057,16.4411358288556,11.3001593655469,13.1128697280782,14.2282335634203,8.54532821041793,9.39340877390621,6.79616977523585,11.4999371753484,9.05894359705491,8.83366073841574,13.5765070877862,5.59175283654366,7.31951992528868,12.7762491156208,10.7291963187608,17.3731930533584,40.7933857075517,23.507992008517,6.5907881338122,7.32000964509802,12.6910895633993,7.99591872884472,9.71718737855256,7.2725815595846,9.5722345209977,16.9053343991525,12.3162900903992,12.6361379216837,16.414464759145,21.8602344177342,16.7828536236435,11.343914177737,13.5634336052144,14.4917743192328,17.039124797885,12.7434345401231,20.1788629176432,15.089759505299,19.4779262572854,19.0027214097065,19.7276159184817,23.9120634334014,14.626590993931,16.8741351854514,20.1024609486678,23.1730351813367,26.7641823399304,19.6072814582959,10.7705401718461,13.8370375388847,12.7844063637321,11.3637473080901,10.231740050865,13.5755059340893,11.1616293480196,13.1453966685813,10.5088808130453,11.5191894939436,7.88003827579657,6.64764238276017,7.45619935869195,6.80605357402257,5.36825675041487,6.09840850835969,13.9950272835827,5.28670052774077,13.4869788998408,20.4756720513825,22.5269571704625,14.8197580520407,14.9245808221273,14.4545728499166,10.6526350623033,10.4396393539793,9.22314146454461,11.3100843960121,9.35095418593409,13.6474860983384,9.88701349519644,10.8069024937347,12.9441827615339,20.6738012038859,22.0499629336777,18.0332377076929,17.7176655225423,18.0375813065892,16.6923251338958,10.813447848248,9.29943932271494,8.63493003127561,9.74837594982224,5.33614728756868,24.859920751698,23.3905204184712,22.2613491261005,16.6345299538572,14.9529839046498,22.6617008085464,15.247895284893,16.8620635846037,12.9043864198398,18.6898668485561,12.6527922207291,15.9139213288426,10.8608917517258,7.89348619496414,5.30687873499704,7.944387177164,21.0335467065238,15.9705676913185,21.8971160649993,18.5405296147917,14.0705256251125,7.85544014923845,15.2204245329083,14.5024332577696,12.6234873099802,12.118562417969,13.764518436122,11.3972088031491,9.25753974921674,18.0949540727127,11.9659250440116,20.1623351937805,14.6246475541508,5.77982123956051,8.43924143463863,14.9180800292775,8.07906967053994,17.6684602873104,12.4940398174924,19.3881057959519,17.4447222505363,21.3886727119098,19.5322806244294,14.5731852602962,19.2888866221466,13.8350722281283,8.03303291054518,10.0777460497871,15.4917075190512,17.1031307321255,16.4970122972535,22.5666735177937,22.5785991624133,23.5812374432506,24.7072654480227,19.7852268230118,13.5271465095328,22.4832615056352,21.8120237686503,17.4683715408513,25.2829406348653,16.8669773719998,20.6271086496374,12.5962654128902,14.5849486165361,19.6625199349787,14.1462443120851,14.1872186913819,13.5560301377574,12.176627524557,13.3964577610424,15.7230044402686,12.0744280392378,9.04166432025344,20.4458953647435,19.3757312035087,16.3448026555302,17.0702451924485,22.1590214655833,13.1166376483433,5.37733375830478,20.1627639341466,16.3045625690946,18.1490636822317,22.4158463835582,22.6912418016902,18.9885883761414,30.596117398894,31.3491253204994,27.9163947084936,8.59203556213602,21.827183557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| |||
|short_description=p1@Gm10294,p1@Rpl17 | |||
}} |
Latest revision as of 17:33, 1 October 2015
Short description: | p1@Gm10294, p1@Rpl17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10294_5end, CAGE_peak_1_at_Rpl17_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 38bp_to_ENSMUST00000079716, NM_001002239, uc008fpw.2_5end |
EntrezGene: | 100042880,319195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.63e-12 | 32 |
hematopoietic oligopotent progenitor cell | 9.63e-12 | 32 |
hematopoietic stem cell | 9.63e-12 | 32 |
hematopoietic multipotent progenitor cell | 9.63e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 3.09e-09 | 25 |
lymphocyte | 6.11e-09 | 13 |
common lymphoid progenitor | 6.11e-09 | 13 |
lymphoid lineage restricted progenitor cell | 9.76e-09 | 12 |
T cell | 4.55e-08 | 11 |
pro-T cell | 4.55e-08 | 11 |
mature alpha-beta T cell | 2.21e-07 | 9 |
alpha-beta T cell | 2.21e-07 | 9 |
immature T cell | 2.21e-07 | 9 |
mature T cell | 2.21e-07 | 9 |
immature alpha-beta T cell | 2.21e-07 | 9 |
connective tissue cell | 5.05e-07 | 46 |
mesenchymal cell | 5.05e-07 | 46 |
epithelial cell | 7.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.86e-10 | 29 |
immune organ | 1.86e-10 | 29 |
hemolymphoid system | 5.61e-10 | 48 |
immune system | 5.61e-10 | 48 |
thymus | 2.87e-09 | 23 |
neck | 2.87e-09 | 23 |
respiratory system epithelium | 2.87e-09 | 23 |
hemolymphoid system gland | 2.87e-09 | 23 |
pharyngeal epithelium | 2.87e-09 | 23 |
thymic region | 2.87e-09 | 23 |
pharyngeal gland | 2.87e-09 | 23 |
entire pharyngeal arch endoderm | 2.87e-09 | 23 |
thymus primordium | 2.87e-09 | 23 |
early pharyngeal endoderm | 2.87e-09 | 23 |
hematopoietic system | 3.68e-09 | 45 |
blood island | 3.68e-09 | 45 |
gland of gut | 1.57e-08 | 24 |
anterior region of body | 1.60e-08 | 43 |
mixed endoderm/mesoderm-derived structure | 1.70e-08 | 35 |
pharynx | 2.01e-08 | 24 |
upper respiratory tract | 2.01e-08 | 24 |
chordate pharynx | 2.01e-08 | 24 |
pharyngeal arch system | 2.01e-08 | 24 |
pharyngeal region of foregut | 2.01e-08 | 24 |
segment of respiratory tract | 2.96e-08 | 27 |
gut epithelium | 6.07e-08 | 55 |
craniocervical region | 1.06e-07 | 36 |
unilaminar epithelium | 4.57e-07 | 66 |
connective tissue | 5.05e-07 | 46 |