FFCP PHASE1:Mm9::chr5:123438692..123438714,-: Difference between revisions
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{{FFCP|EntrezGene=30841|HGNC=|MCL_coexpression_id=7|UniProt=D3YUE3|association_with_transcript=-147bp_to_ENSMUST00000156474_5end|description=CAGE_peak_10_at_Kdm2b_5end|id=chr5:123438692..123438714,-|ontology_enrichment_celltype=CL:0000791!9.17e-15!9;CL:0000789!9.17e-15!9;CL:0002420!9.17e-15!9;CL:0002419!9.17e-15!9;CL:0000790!9.17e-15!9;CL:0000624!2.74e-13!8;CL:0000838!5.66e-13!12;CL:0000542!9.35e-12!13;CL:0000051!9.35e-12!13;CL:0000084!1.27e-11!11;CL:0000827!1.27e-11!11;CL:0000893!2.65e-10!6;CL:0002489!2.65e-10!6;CL:0000898!2.65e-10!6;CL:0000809!2.65e-10!6;CL:0000810!2.65e-10!6;CL:0000895!2.65e-10!6;CL:0000808!2.65e-10!6;CL:0000894!2.65e-10!6;CL:0000806!2.65e-10!6;CL:0000807!2.65e-10!6;CL:0000805!2.65e-10!6;CL:0002425!2.65e-10!6;CL:0002436!2.65e-10!6;CL:0002427!2.65e-10!6;CL:0002428!2.65e-10!6;CL:0002429!2.65e-10!6;CL:0002433!2.65e-10!6;CL:0002431!2.65e-10!6;CL:0002432!2.65e-10!6;CL:0000988!4.02e-10!32;CL:0002032!4.02e-10!32;CL:0000037!4.02e-10!32;CL:0000566!4.02e-10!32;CL:0000837!4.02e-10!32;CL:0002031!1.13e-09!25;CL:0000738!2.45e-08!17;CL:0002087!2.45e-08!17;CL:0002320!1.40e-07!46;CL:0000134!1.40e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,3.95e-59,9;CL:0000789,3.95e-59,9;CL:0002420,3.95e-59,9;CL:0002419,3.95e-59,9;CL:0000790,3.95e-59,9;CL:0000624,2.62e-49,8;CL:0000084,1.92e-48,11;CL:0000827,1.92e-48,11;CL:0000838,1.97e-44,12;CL:0000542,4.88e-41,13;CL:0000051,4.88e-41,13;CL:0000738,1.92e-31,17;CL:0002087,1.92e-31,17;CL:0000893,4.43e-30,6;CL:0002489,4.43e-30,6;CL:0000898,4.43e-30,6;CL:0000809,4.43e-30,6;CL:0000810,4.43e-30,6;CL:0000895,4.43e-30,6;CL:0000808,4.43e-30,6;CL:0000894,4.43e-30,6;CL:0000806,4.43e-30,6;CL:0000807,4.43e-30,6;CL:0000805,4.43e-30,6;CL:0002425,4.43e-30,6;CL:0002436,4.43e-30,6;CL:0002427,4.43e-30,6;CL:0002428,4.43e-30,6;CL:0002429,4.43e-30,6;CL:0002433,4.43e-30,6;CL:0002431,4.43e-30,6;CL:0002432,4.43e-30,6;CL:0002031,1.94e-21,25;CL:0000988,9.01e-17,32;CL:0002032,9.01e-17,32;CL:0000037,9.01e-17,32;CL:0000837,9.01e-17,32;CL:0000815,5.53e-12,1;CL:0000792,5.53e-12,1;CL:0000625,7.11e-12,1;CL:0002320,1.13e-11,46;CL:0000134,1.13e-11,46;CL:0000219,6.13e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.77e-13!23;UBERON:0000974!3.77e-13!23;UBERON:0004807!3.77e-13!23;UBERON:0005058!3.77e-13!23;UBERON:0003351!3.77e-13!23;UBERON:0009113!3.77e-13!23;UBERON:0003295!3.77e-13!23;UBERON:0009722!3.77e-13!23;UBERON:0005562!3.77e-13!23;UBERON:0007690!3.77e-13!23;UBERON:0002390!5.70e-13!45;UBERON:0003061!5.70e-13!45;UBERON:0006562!2.07e-12!24;UBERON:0003408!2.07e-12!24;UBERON:0001557!2.07e-12!24;UBERON:0001042!2.07e-12!24;UBERON:0008814!2.07e-12!24;UBERON:0009145!2.07e-12!24;UBERON:0004177!2.34e-12!29;UBERON:0002193!9.90e-12!48;UBERON:0000072!1.57e-10!27;UBERON:0003081!8.89e-08!88;UBERON:0002405!1.14e-07!70;UBERON:0002384!1.40e-07!46;UBERON:0000063!3.78e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.56e-12,23;UBERON:0000974,2.56e-12,23;UBERON:0004807,2.56e-12,23;UBERON:0005058,2.56e-12,23;UBERON:0003351,2.56e-12,23;UBERON:0009113,2.56e-12,23;UBERON:0003295,2.56e-12,23;UBERON:0009722,2.56e-12,23;UBERON:0005562,2.56e-12,23;UBERON:0007690,2.56e-12,23;UBERON:0006562,8.18e-12,24;UBERON:0003408,8.18e-12,24;UBERON:0001557,8.18e-12,24;UBERON:0001042,8.18e-12,24;UBERON:0008814,8.18e-12,24;UBERON:0009145,8.18e-12,24;UBERON:0002384,1.13e-11,46;UBERON:0000072,1.59e-10,27;UBERON:0004177,8.20e-10,29;UBERON:0005057,8.20e-10,29;UBERON:0000077,3.70e-08,35;UBERON:0007811,6.17e-08,36;UBERON:0000065,5.54e-07,41;UBERON:0001004,8.08e-07,42|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,4.50523910885334,5.14941957908386,2.73948749160808,2.71225340584144,0.684802919724823,0.262261207256992,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.480781798079875,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p10@Kdm2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30841 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUE3 | |||
|association_with_transcript=-147bp_to_ENSMUST00000156474_5end | |||
|cluster_id=chr5:123438692..123438714,- | |||
|description=CAGE_peak_10_at_Kdm2b_5end | |||
|id=chr5:123438692..123438714,- | |||
|ontology_enrichment_celltype=CL:0000791!9.17e-15!9;CL:0000789!9.17e-15!9;CL:0002420!9.17e-15!9;CL:0002419!9.17e-15!9;CL:0000790!9.17e-15!9;CL:0000624!2.74e-13!8;CL:0000838!5.66e-13!12;CL:0000542!9.35e-12!13;CL:0000051!9.35e-12!13;CL:0000084!1.27e-11!11;CL:0000827!1.27e-11!11;CL:0000893!2.65e-10!6;CL:0002489!2.65e-10!6;CL:0000898!2.65e-10!6;CL:0000809!2.65e-10!6;CL:0000810!2.65e-10!6;CL:0000895!2.65e-10!6;CL:0000808!2.65e-10!6;CL:0000894!2.65e-10!6;CL:0000806!2.65e-10!6;CL:0000807!2.65e-10!6;CL:0000805!2.65e-10!6;CL:0002425!2.65e-10!6;CL:0002436!2.65e-10!6;CL:0002427!2.65e-10!6;CL:0002428!2.65e-10!6;CL:0002429!2.65e-10!6;CL:0002433!2.65e-10!6;CL:0002431!2.65e-10!6;CL:0002432!2.65e-10!6;CL:0000988!4.02e-10!32;CL:0002032!4.02e-10!32;CL:0000037!4.02e-10!32;CL:0000566!4.02e-10!32;CL:0000837!4.02e-10!32;CL:0002031!1.13e-09!25;CL:0000738!2.45e-08!17;CL:0002087!2.45e-08!17;CL:0002320!1.40e-07!46;CL:0000134!1.40e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.95e-59,9;CL:0000789,3.95e-59,9;CL:0002420,3.95e-59,9;CL:0002419,3.95e-59,9;CL:0000790,3.95e-59,9;CL:0000624,2.62e-49,8;CL:0000084,1.92e-48,11;CL:0000827,1.92e-48,11;CL:0000838,1.97e-44,12;CL:0000542,4.88e-41,13;CL:0000051,4.88e-41,13;CL:0000738,1.92e-31,17;CL:0002087,1.92e-31,17;CL:0000893,4.43e-30,6;CL:0002489,4.43e-30,6;CL:0000898,4.43e-30,6;CL:0000809,4.43e-30,6;CL:0000810,4.43e-30,6;CL:0000895,4.43e-30,6;CL:0000808,4.43e-30,6;CL:0000894,4.43e-30,6;CL:0000806,4.43e-30,6;CL:0000807,4.43e-30,6;CL:0000805,4.43e-30,6;CL:0002425,4.43e-30,6;CL:0002436,4.43e-30,6;CL:0002427,4.43e-30,6;CL:0002428,4.43e-30,6;CL:0002429,4.43e-30,6;CL:0002433,4.43e-30,6;CL:0002431,4.43e-30,6;CL:0002432,4.43e-30,6;CL:0002031,1.94e-21,25;CL:0000988,9.01e-17,32;CL:0002032,9.01e-17,32;CL:0000037,9.01e-17,32;CL:0000837,9.01e-17,32;CL:0000815,5.53e-12,1;CL:0000792,5.53e-12,1;CL:0000625,7.11e-12,1;CL:0002320,1.13e-11,46;CL:0000134,1.13e-11,46;CL:0000219,6.13e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.77e-13!23;UBERON:0000974!3.77e-13!23;UBERON:0004807!3.77e-13!23;UBERON:0005058!3.77e-13!23;UBERON:0003351!3.77e-13!23;UBERON:0009113!3.77e-13!23;UBERON:0003295!3.77e-13!23;UBERON:0009722!3.77e-13!23;UBERON:0005562!3.77e-13!23;UBERON:0007690!3.77e-13!23;UBERON:0002390!5.70e-13!45;UBERON:0003061!5.70e-13!45;UBERON:0006562!2.07e-12!24;UBERON:0003408!2.07e-12!24;UBERON:0001557!2.07e-12!24;UBERON:0001042!2.07e-12!24;UBERON:0008814!2.07e-12!24;UBERON:0009145!2.07e-12!24;UBERON:0004177!2.34e-12!29;UBERON:0002193!9.90e-12!48;UBERON:0000072!1.57e-10!27;UBERON:0003081!8.89e-08!88;UBERON:0002405!1.14e-07!70;UBERON:0002384!1.40e-07!46;UBERON:0000063!3.78e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.56e-12,23;UBERON:0000974,2.56e-12,23;UBERON:0004807,2.56e-12,23;UBERON:0005058,2.56e-12,23;UBERON:0003351,2.56e-12,23;UBERON:0009113,2.56e-12,23;UBERON:0003295,2.56e-12,23;UBERON:0009722,2.56e-12,23;UBERON:0005562,2.56e-12,23;UBERON:0007690,2.56e-12,23;UBERON:0006562,8.18e-12,24;UBERON:0003408,8.18e-12,24;UBERON:0001557,8.18e-12,24;UBERON:0001042,8.18e-12,24;UBERON:0008814,8.18e-12,24;UBERON:0009145,8.18e-12,24;UBERON:0002384,1.13e-11,46;UBERON:0000072,1.59e-10,27;UBERON:0004177,8.20e-10,29;UBERON:0005057,8.20e-10,29;UBERON:0000077,3.70e-08,35;UBERON:0007811,6.17e-08,36;UBERON:0000065,5.54e-07,41;UBERON:0001004,8.08e-07,42 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,4.50523910885334,5.14941957908386,2.73948749160808,2.71225340584144,0.684802919724823,0.262261207256992,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.480781798079875,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p10@Kdm2b | |||
}} |
Latest revision as of 20:32, 1 October 2015
Short description: | p10@Kdm2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Kdm2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -147bp_to_ENSMUST00000156474_5end |
EntrezGene: | Kdm2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.56e-12 | 23 |
neck | 2.56e-12 | 23 |
respiratory system epithelium | 2.56e-12 | 23 |
hemolymphoid system gland | 2.56e-12 | 23 |
pharyngeal epithelium | 2.56e-12 | 23 |
thymic region | 2.56e-12 | 23 |
pharyngeal gland | 2.56e-12 | 23 |
entire pharyngeal arch endoderm | 2.56e-12 | 23 |
thymus primordium | 2.56e-12 | 23 |
early pharyngeal endoderm | 2.56e-12 | 23 |
pharynx | 8.18e-12 | 24 |
gland of gut | 8.18e-12 | 24 |
upper respiratory tract | 8.18e-12 | 24 |
chordate pharynx | 8.18e-12 | 24 |
pharyngeal arch system | 8.18e-12 | 24 |
pharyngeal region of foregut | 8.18e-12 | 24 |
connective tissue | 1.13e-11 | 46 |
segment of respiratory tract | 1.59e-10 | 27 |
hemopoietic organ | 8.20e-10 | 29 |
immune organ | 8.20e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 3.70e-08 | 35 |
craniocervical region | 6.17e-08 | 36 |
respiratory tract | 5.54e-07 | 41 |
respiratory system | 8.08e-07 | 42 |