Personal tools

FFCP PHASE1:Mm9::chr5:123439052..123439089,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=30841
|EntrezGene=30841
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q6P1G2,D3YUE3
|UniProt=Q6P1G2,D3YUE3
|association_with_transcript=11bp_to_ENSMUST00000123479,NM_001003953,uc008zms.1,uc008zmu.1,uc008zmv.1_5end
|association_with_transcript=11bp_to_ENSMUST00000123479,NM_001003953,uc008zms.1,uc008zmu.1,uc008zmv.1_5end
|cluster_id=chr5:123439052..123439089,-
|description=CAGE_peak_4_at_Kdm2b_5end
|description=CAGE_peak_4_at_Kdm2b_5end
|id=chr5:123439052..123439089,-
|id=chr5:123439052..123439089,-
|ontology_enrichment_celltype=CL:0000542!9.25e-11!13;CL:0000051!9.25e-11!13;CL:0000838!1.17e-10!12;CL:0000084!7.87e-10!11;CL:0000827!7.87e-10!11;CL:0000791!4.55e-09!9;CL:0000789!4.55e-09!9;CL:0002420!4.55e-09!9;CL:0002419!4.55e-09!9;CL:0000790!4.55e-09!9;CL:0000624!3.22e-08!8;CL:0000738!5.06e-08!17;CL:0002087!5.06e-08!17;CL:0000988!8.90e-07!32;CL:0002032!8.90e-07!32;CL:0000037!8.90e-07!32;CL:0000566!8.90e-07!32;CL:0000837!8.90e-07!32
|ontology_enrichment_celltype=CL:0000542!9.25e-11!13;CL:0000051!9.25e-11!13;CL:0000838!1.17e-10!12;CL:0000084!7.87e-10!11;CL:0000827!7.87e-10!11;CL:0000791!4.55e-09!9;CL:0000789!4.55e-09!9;CL:0002420!4.55e-09!9;CL:0002419!4.55e-09!9;CL:0000790!4.55e-09!9;CL:0000624!3.22e-08!8;CL:0000738!5.06e-08!17;CL:0002087!5.06e-08!17;CL:0000988!8.90e-07!32;CL:0002032!8.90e-07!32;CL:0000037!8.90e-07!32;CL:0000566!8.90e-07!32;CL:0000837!8.90e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-29,9;CL:0000789,1.30e-29,9;CL:0002420,1.30e-29,9;CL:0002419,1.30e-29,9;CL:0000790,1.30e-29,9;CL:0000838,6.11e-27,12;CL:0000624,1.98e-26,8;CL:0000542,1.02e-24,13;CL:0000051,1.02e-24,13;CL:0000084,6.20e-24,11;CL:0000827,6.20e-24,11;CL:0000893,3.37e-20,6;CL:0002489,3.37e-20,6;CL:0000898,3.37e-20,6;CL:0000809,3.37e-20,6;CL:0000810,3.37e-20,6;CL:0000895,3.37e-20,6;CL:0000808,3.37e-20,6;CL:0000894,3.37e-20,6;CL:0000806,3.37e-20,6;CL:0000807,3.37e-20,6;CL:0000805,3.37e-20,6;CL:0002425,3.37e-20,6;CL:0002436,3.37e-20,6;CL:0002427,3.37e-20,6;CL:0002428,3.37e-20,6;CL:0002429,3.37e-20,6;CL:0002433,3.37e-20,6;CL:0002431,3.37e-20,6;CL:0002432,3.37e-20,6;CL:0000738,1.90e-18,17;CL:0002087,1.90e-18,17;CL:0002031,6.38e-12,25;CL:0000988,6.83e-09,32;CL:0002032,6.83e-09,32;CL:0000037,6.83e-09,32;CL:0000837,6.83e-09,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!2.92e-09!23;UBERON:0000974!2.92e-09!23;UBERON:0004807!2.92e-09!23;UBERON:0005058!2.92e-09!23;UBERON:0003351!2.92e-09!23;UBERON:0009113!2.92e-09!23;UBERON:0003295!2.92e-09!23;UBERON:0009722!2.92e-09!23;UBERON:0005562!2.92e-09!23;UBERON:0007690!2.92e-09!23;UBERON:0006562!1.52e-08!24;UBERON:0003408!1.52e-08!24;UBERON:0001557!1.52e-08!24;UBERON:0001042!1.52e-08!24;UBERON:0008814!1.52e-08!24;UBERON:0009145!1.52e-08!24;UBERON:0004177!6.59e-08!29;UBERON:0000072!1.48e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.07e-21,23;UBERON:0000974,5.07e-21,23;UBERON:0004807,5.07e-21,23;UBERON:0005058,5.07e-21,23;UBERON:0003351,5.07e-21,23;UBERON:0009113,5.07e-21,23;UBERON:0003295,5.07e-21,23;UBERON:0009722,5.07e-21,23;UBERON:0005562,5.07e-21,23;UBERON:0007690,5.07e-21,23;UBERON:0006562,4.91e-20,24;UBERON:0003408,4.91e-20,24;UBERON:0001557,4.91e-20,24;UBERON:0001042,4.91e-20,24;UBERON:0008814,4.91e-20,24;UBERON:0009145,4.91e-20,24;UBERON:0000072,1.63e-17,27;UBERON:0004177,4.00e-16,29;UBERON:0005057,4.00e-16,29;UBERON:0000077,6.61e-13,35;UBERON:0007811,1.78e-12,36;UBERON:0000153,1.18e-11,43;UBERON:0000065,1.24e-10,41;UBERON:0001004,2.56e-10,42;UBERON:0002390,1.86e-09,45;UBERON:0003061,1.86e-09,45;UBERON:0002193,1.05e-08,48;UBERON:0002405,1.05e-08,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,1.36e-07,60;UBERON:0002530,8.53e-07,65
|phase1_expression=0,0,0,0,0,0,0,7.23090611272827,114.742808553608,55.4732927383125,14.2110913627169,7.8974437405383,7.53283211697305,5.68232615723483,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.935476191661768,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,7.88578248471361,58.7543335029189,42.6839124910929,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,2.07379224616955,1.62007125998029,1.05162480675691,0,0,0.734944795289724,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0.37863096666592,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0.958520996047362,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.210441855886474,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0,0,1.07783996466421,0,0.175951124163949,0,0,0.696504333044333,0,0.199034266818493,0.702213187313235,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.582961673259701,0,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,1.35982743995084,1.25956307091292,1.65839968565309,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,1.69107881605257,1.04661582230785,1.48912641411388,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,5.47257011889944,0.632022241256357,0.405450430580328,0,0.25984164595559,0,0.79472541912506,0.841368146639782,1.32920574457119,1.21159739937777,1.447929326445,1.20991422164209,2.33898913775406,2.21287235772758,2.33753804363138,0,0.221985953374065,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,7.23090611272827,114.742808553608,55.4732927383125,14.2110913627169,7.8974437405383,7.53283211697305,5.68232615723483,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.935476191661768,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,7.88578248471361,58.7543335029189,42.6839124910929,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,2.07379224616955,1.62007125998029,1.05162480675691,0,0,0.734944795289724,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0.37863096666592,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0.958520996047362,0.599902730993408,0.381210681219194,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.210441855886474,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0,0,1.07783996466421,0,0.175951124163949,0,0,0.696504333044333,0,0.199034266818493,0.702213187313235,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.582961673259701,0,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,1.35982743995084,1.25956307091292,1.65839968565309,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,1.69107881605257,1.04661582230785,1.48912641411388,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,5.47257011889944,0.632022241256357,0.405450430580328,0,0.25984164595559,0,0.79472541912506,0.841368146639782,1.32920574457119,1.21159739937777,1.447929326445,1.20991422164209,2.33898913775406,2.21287235772758,2.33753804363138,0,0.221985953374065,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421
|short_description=p4@Kdm2b
|short_description=p4@Kdm2b
}}
}}

Latest revision as of 20:32, 1 October 2015

Short description:p4@Kdm2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Kdm2b_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 11bp_to_ENSMUST00000123479, NM_001003953, uc008zms.1, uc008zmu.1, uc008zmv.1_5end
EntrezGene:Kdm2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Kdm2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7114.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F255.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I958.75
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.30e-299
alpha-beta T cell1.30e-299
immature T cell1.30e-299
mature T cell1.30e-299
immature alpha-beta T cell1.30e-299
lymphoid lineage restricted progenitor cell6.11e-2712
CD4-positive, alpha-beta T cell1.98e-268
lymphocyte1.02e-2413
common lymphoid progenitor1.02e-2413
T cell6.20e-2411
pro-T cell6.20e-2411
thymocyte3.37e-206
double negative thymocyte3.37e-206
naive T cell3.37e-206
double-positive, alpha-beta thymocyte3.37e-206
CD4-positive, alpha-beta thymocyte3.37e-206
naive thymus-derived CD4-positive, alpha-beta T cell3.37e-206
DN4 thymocyte3.37e-206
DN1 thymic pro-T cell3.37e-206
DN2 thymocyte3.37e-206
DN3 thymocyte3.37e-206
immature single positive thymocyte3.37e-206
early T lineage precursor3.37e-206
mature CD4 single-positive thymocyte3.37e-206
resting double-positive thymocyte3.37e-206
double-positive blast3.37e-206
CD69-positive double-positive thymocyte3.37e-206
CD69-positive, CD4-positive single-positive thymocyte3.37e-206
CD4-positive, CD8-intermediate double-positive thymocyte3.37e-206
CD24-positive, CD4 single-positive thymocyte3.37e-206
leukocyte1.90e-1817
nongranular leukocyte1.90e-1817
hematopoietic lineage restricted progenitor cell6.38e-1225
hematopoietic cell6.83e-0932
hematopoietic oligopotent progenitor cell6.83e-0932
hematopoietic stem cell6.83e-0932
hematopoietic multipotent progenitor cell6.83e-0932

Uber anatomy
Ontology termp-valuen
thymus5.07e-2123
neck5.07e-2123
respiratory system epithelium5.07e-2123
hemolymphoid system gland5.07e-2123
pharyngeal epithelium5.07e-2123
thymic region5.07e-2123
pharyngeal gland5.07e-2123
entire pharyngeal arch endoderm5.07e-2123
thymus primordium5.07e-2123
early pharyngeal endoderm5.07e-2123
pharynx4.91e-2024
gland of gut4.91e-2024
upper respiratory tract4.91e-2024
chordate pharynx4.91e-2024
pharyngeal arch system4.91e-2024
pharyngeal region of foregut4.91e-2024
segment of respiratory tract1.63e-1727
hemopoietic organ4.00e-1629
immune organ4.00e-1629
mixed endoderm/mesoderm-derived structure6.61e-1335
craniocervical region1.78e-1236
anterior region of body1.18e-1143
respiratory tract1.24e-1041
respiratory system2.56e-1042
hematopoietic system1.86e-0945
blood island1.86e-0945
hemolymphoid system1.05e-0848
immune system1.05e-0848
gut epithelium1.55e-0855
endocrine gland1.36e-0760
gland8.53e-0765
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:123439052..123439089,-&oldid=4320991"