FFCP PHASE1:Mm9::chr2:101978127..101978141,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=241576|HGNC=|MCL_coexpression_id=47|UniProt=|association_with_transcript=134bp_to_ENSMUST00000127888_5end|description=CAGE_peak_2_at_Ldlrad3_5end|id=chr2:101978127..101978141,-|ontology_enrichment_celltype=CL:0000197!3.27e-07!2;CL:0002491!3.27e-07!2;CL:0000098!3.27e-07!2|ontology_enrichment_celltype_v019_2=CL:0000197,1.68e-58,2;CL:0002491,1.68e-58,2;CL:0000098,1.68e-58,2;CL:0002374,2.87e-30,1;CL:0000202,2.87e-30,1;CL:0000199,2.87e-30,1;CL:0000855,2.87e-30,1;CL:0000589,2.87e-30,1;CL:0000710,5.62e-30,1;CL:0002077,5.62e-30,1;CL:0005014,5.62e-30,1;CL:0002315,5.62e-30,1;CL:0002490,5.62e-30,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.32e-10!23;UBERON:0000014!2.16e-09!5;UBERON:0001003!2.16e-09!5;UBERON:0002097!2.16e-09!5;UBERON:0002199!2.16e-09!5;UBERON:0007029!2.16e-09!5;UBERON:0007376!2.16e-09!5;UBERON:0002416!2.16e-09!5;UBERON:0007383!2.16e-09!5;UBERON:0003465!3.27e-07!2;UBERON:0008193!3.27e-07!2;UBERON:0000032!3.27e-07!2;UBERON:0005744!3.27e-07!2;UBERON:0008001!3.27e-07!2;UBERON:0007497!3.27e-07!2;UBERON:0009955!3.27e-07!2;UBERON:0003067!3.27e-07!2;UBERON:0002546!3.27e-07!2;UBERON:0007914!3.27e-07!2;UBERON:0003457!3.27e-07!2;UBERON:0004766!3.27e-07!2;UBERON:0005253!3.27e-07!2;UBERON:0002227!3.27e-07!2;UBERON:0001846!3.27e-07!2;UBERON:0003128!3.27e-07!2;UBERON:0002241!3.27e-07!2;UBERON:0002105!3.27e-07!2;UBERON:0001678!3.27e-07!2;UBERON:0003129!3.27e-07!2;UBERON:0001694!3.27e-07!2;UBERON:0004681!3.27e-07!2;UBERON:0001839!3.27e-07!2;UBERON:0001690!3.27e-07!2;UBERON:0001844!3.27e-07!2;UBERON:0001849!3.27e-07!2;UBERON:0002499!3.27e-07!2;UBERON:0005944!3.27e-07!2;UBERON:0001855!3.27e-07!2;UBERON:0001703!3.27e-07!2;UBERON:0003069!3.27e-07!2;UBERON:0003051!3.27e-07!2;UBERON:0004288!3.27e-07!2;UBERON:0004637!3.27e-07!2;UBERON:0004761!3.27e-07!2;UBERON:0010113!3.27e-07!2;UBERON:0003089!3.27e-07!2;UBERON:0009123!3.27e-07!2;UBERON:0009617!3.27e-07!2;UBERON:0005641!3.27e-07!2;UBERON:0010147!7.17e-07!2;UBERON:0003937!7.17e-07!2;UBERON:0005399!7.17e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.68e-58,2;UBERON:0008193,1.68e-58,2;UBERON:0005913,1.68e-58,2;UBERON:0011158,1.68e-58,2;UBERON:0005744,1.68e-58,2;UBERON:0003457,1.68e-58,2;UBERON:0008001,1.68e-58,2;UBERON:0007497,1.68e-58,2;UBERON:0009955,1.68e-58,2;UBERON:0003067,1.68e-58,2;UBERON:0002546,1.68e-58,2;UBERON:0007914,1.68e-58,2;UBERON:0005253,1.68e-58,2;UBERON:0002227,1.68e-58,2;UBERON:0001846,1.68e-58,2;UBERON:0004339,1.68e-58,2;UBERON:0002105,1.68e-58,2;UBERON:0001678,1.68e-58,2;UBERON:0003128,1.68e-58,2;UBERON:0001694,1.68e-58,2;UBERON:0004681,1.68e-58,2;UBERON:0001839,1.68e-58,2;UBERON:0001690,1.68e-58,2;UBERON:0001844,1.68e-58,2;UBERON:0001849,1.68e-58,2;UBERON:0002499,1.68e-58,2;UBERON:0001855,1.68e-58,2;UBERON:0011137,1.68e-58,2;UBERON:0001703,1.68e-58,2;UBERON:0010323,1.68e-58,2;UBERON:0003129,1.68e-58,2;UBERON:0003069,1.68e-58,2;UBERON:0003051,1.68e-58,2;UBERON:0004637,1.68e-58,2;UBERON:0004761,1.68e-58,2;UBERON:0010113,1.68e-58,2;UBERON:0009123,1.68e-58,2;UBERON:0010351,1.68e-58,2;UBERON:0009617,1.68e-58,2;UBERON:0005641,1.68e-58,2;UBERON:0010349,1.68e-58,2;UBERON:0002367,1.10e-29,1;UBERON:0009846,1.10e-29,1;UBERON:0003353,1.10e-29,1;UBERON:0004902,1.10e-29,1;UBERON:0003820,1.10e-29,1;UBERON:0009847,1.10e-29,1;UBERON:0000075,1.98e-20,6;UBERON:0005856,1.98e-20,6;UBERON:0005866,1.98e-20,6;UBERON:0005863,1.98e-20,6;UBERON:0000058,1.08e-17,7;UBERON:0010147,1.33e-15,2;UBERON:0003937,1.33e-15,2;UBERON:0005399,1.33e-15,2;UBERON:0000485,1.07e-11,11;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11;UBERON:0000162,7.15e-11,3;UBERON:0001353,7.15e-11,3;UBERON:0000163,7.15e-11,3;UBERON:0006866,7.15e-11,3;UBERON:0001046,7.15e-11,3;UBERON:0000164,7.15e-11,3;UBERON:0000931,7.15e-11,3;UBERON:0000020,8.07e-11,12;UBERON:0001032,8.07e-11,12;UBERON:0004456,8.07e-11,12;UBERON:0000033,4.49e-10,13;UBERON:0005085,4.49e-10,13;UBERON:0000161,4.77e-07,5;UBERON:0004122,4.77e-07,5|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94361575374705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54369878638473,0.32977250588296,0,0.603129249281559,0.716234064018819,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.809186078308924,0.743881101528023,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p2@Ldlrad3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241576 | |||
|HGNC= | |||
|MCL_coexpression_id=47 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=134bp_to_ENSMUST00000127888_5end | |||
|cluster_id=chr2:101978127..101978141,- | |||
|description=CAGE_peak_2_at_Ldlrad3_5end | |||
|id=chr2:101978127..101978141,- | |||
|ontology_enrichment_celltype=CL:0000197!3.27e-07!2;CL:0002491!3.27e-07!2;CL:0000098!3.27e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.68e-58,2;CL:0002491,1.68e-58,2;CL:0000098,1.68e-58,2;CL:0002374,2.87e-30,1;CL:0000202,2.87e-30,1;CL:0000199,2.87e-30,1;CL:0000855,2.87e-30,1;CL:0000589,2.87e-30,1;CL:0000710,5.62e-30,1;CL:0002077,5.62e-30,1;CL:0005014,5.62e-30,1;CL:0002315,5.62e-30,1;CL:0002490,5.62e-30,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.32e-10!23;UBERON:0000014!2.16e-09!5;UBERON:0001003!2.16e-09!5;UBERON:0002097!2.16e-09!5;UBERON:0002199!2.16e-09!5;UBERON:0007029!2.16e-09!5;UBERON:0007376!2.16e-09!5;UBERON:0002416!2.16e-09!5;UBERON:0007383!2.16e-09!5;UBERON:0003465!3.27e-07!2;UBERON:0008193!3.27e-07!2;UBERON:0000032!3.27e-07!2;UBERON:0005744!3.27e-07!2;UBERON:0008001!3.27e-07!2;UBERON:0007497!3.27e-07!2;UBERON:0009955!3.27e-07!2;UBERON:0003067!3.27e-07!2;UBERON:0002546!3.27e-07!2;UBERON:0007914!3.27e-07!2;UBERON:0003457!3.27e-07!2;UBERON:0004766!3.27e-07!2;UBERON:0005253!3.27e-07!2;UBERON:0002227!3.27e-07!2;UBERON:0001846!3.27e-07!2;UBERON:0003128!3.27e-07!2;UBERON:0002241!3.27e-07!2;UBERON:0002105!3.27e-07!2;UBERON:0001678!3.27e-07!2;UBERON:0003129!3.27e-07!2;UBERON:0001694!3.27e-07!2;UBERON:0004681!3.27e-07!2;UBERON:0001839!3.27e-07!2;UBERON:0001690!3.27e-07!2;UBERON:0001844!3.27e-07!2;UBERON:0001849!3.27e-07!2;UBERON:0002499!3.27e-07!2;UBERON:0005944!3.27e-07!2;UBERON:0001855!3.27e-07!2;UBERON:0001703!3.27e-07!2;UBERON:0003069!3.27e-07!2;UBERON:0003051!3.27e-07!2;UBERON:0004288!3.27e-07!2;UBERON:0004637!3.27e-07!2;UBERON:0004761!3.27e-07!2;UBERON:0010113!3.27e-07!2;UBERON:0003089!3.27e-07!2;UBERON:0009123!3.27e-07!2;UBERON:0009617!3.27e-07!2;UBERON:0005641!3.27e-07!2;UBERON:0010147!7.17e-07!2;UBERON:0003937!7.17e-07!2;UBERON:0005399!7.17e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.68e-58,2;UBERON:0008193,1.68e-58,2;UBERON:0005913,1.68e-58,2;UBERON:0011158,1.68e-58,2;UBERON:0005744,1.68e-58,2;UBERON:0003457,1.68e-58,2;UBERON:0008001,1.68e-58,2;UBERON:0007497,1.68e-58,2;UBERON:0009955,1.68e-58,2;UBERON:0003067,1.68e-58,2;UBERON:0002546,1.68e-58,2;UBERON:0007914,1.68e-58,2;UBERON:0005253,1.68e-58,2;UBERON:0002227,1.68e-58,2;UBERON:0001846,1.68e-58,2;UBERON:0004339,1.68e-58,2;UBERON:0002105,1.68e-58,2;UBERON:0001678,1.68e-58,2;UBERON:0003128,1.68e-58,2;UBERON:0001694,1.68e-58,2;UBERON:0004681,1.68e-58,2;UBERON:0001839,1.68e-58,2;UBERON:0001690,1.68e-58,2;UBERON:0001844,1.68e-58,2;UBERON:0001849,1.68e-58,2;UBERON:0002499,1.68e-58,2;UBERON:0001855,1.68e-58,2;UBERON:0011137,1.68e-58,2;UBERON:0001703,1.68e-58,2;UBERON:0010323,1.68e-58,2;UBERON:0003129,1.68e-58,2;UBERON:0003069,1.68e-58,2;UBERON:0003051,1.68e-58,2;UBERON:0004637,1.68e-58,2;UBERON:0004761,1.68e-58,2;UBERON:0010113,1.68e-58,2;UBERON:0009123,1.68e-58,2;UBERON:0010351,1.68e-58,2;UBERON:0009617,1.68e-58,2;UBERON:0005641,1.68e-58,2;UBERON:0010349,1.68e-58,2;UBERON:0002367,1.10e-29,1;UBERON:0009846,1.10e-29,1;UBERON:0003353,1.10e-29,1;UBERON:0004902,1.10e-29,1;UBERON:0003820,1.10e-29,1;UBERON:0009847,1.10e-29,1;UBERON:0000075,1.98e-20,6;UBERON:0005856,1.98e-20,6;UBERON:0005866,1.98e-20,6;UBERON:0005863,1.98e-20,6;UBERON:0000058,1.08e-17,7;UBERON:0010147,1.33e-15,2;UBERON:0003937,1.33e-15,2;UBERON:0005399,1.33e-15,2;UBERON:0000485,1.07e-11,11;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11;UBERON:0000162,7.15e-11,3;UBERON:0001353,7.15e-11,3;UBERON:0000163,7.15e-11,3;UBERON:0006866,7.15e-11,3;UBERON:0001046,7.15e-11,3;UBERON:0000164,7.15e-11,3;UBERON:0000931,7.15e-11,3;UBERON:0000020,8.07e-11,12;UBERON:0001032,8.07e-11,12;UBERON:0004456,8.07e-11,12;UBERON:0000033,4.49e-10,13;UBERON:0005085,4.49e-10,13;UBERON:0000161,4.77e-07,5;UBERON:0004122,4.77e-07,5 | |||
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94361575374705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54369878638473,0.32977250588296,0,0.603129249281559,0.716234064018819,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.809186078308924,0.743881101528023,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Ldlrad3 | |||
}} |
Latest revision as of 21:08, 1 October 2015
Short description: | p2@Ldlrad3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ldlrad3_5end |
Coexpression cluster: | MCL_coexpression_mm9:47 |
Association with transcript: | 134bp_to_ENSMUST00000127888_5end |
EntrezGene: | Ldlrad3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.68e-58 | 2 |
auditory epithelial cell | 1.68e-58 | 2 |
sensory epithelial cell | 1.68e-58 | 2 |
ear hair cell | 2.87e-30 | 1 |
auditory hair cell | 2.87e-30 | 1 |
mechanoreceptor cell | 2.87e-30 | 1 |
sensory hair cell | 2.87e-30 | 1 |
cochlear inner hair cell | 2.87e-30 | 1 |
neurecto-epithelial cell | 5.62e-30 | 1 |
ecto-epithelial cell | 5.62e-30 | 1 |
auditory epithelial support cell | 5.62e-30 | 1 |
supporting cell of cochlea | 5.62e-30 | 1 |
organ of Corti supporting cell | 5.62e-30 | 1 |