Personal tools

FFCP PHASE1:Mm9::chr2:11093809..11093826,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=B1AYX8
|UniProt=B1AYX8
|association_with_transcript=69bp_to_ENSMUST00000114853_5end
|association_with_transcript=69bp_to_ENSMUST00000114853_5end
|cluster_id=chr2:11093809..11093826,+
|description=CAGE_peak_6_at_Prkcq_5end
|description=CAGE_peak_6_at_Prkcq_5end
|id=chr2:11093809..11093826,+
|id=chr2:11093809..11093826,+
|ontology_enrichment_celltype=CL:0000791!2.99e-07!9;CL:0000789!2.99e-07!9;CL:0002420!2.99e-07!9;CL:0002419!2.99e-07!9;CL:0000790!2.99e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,2.80e-14,9;CL:0000789,2.80e-14,9;CL:0002420,2.80e-14,9;CL:0002419,2.80e-14,9;CL:0000790,2.80e-14,9;CL:0000624,1.14e-12,8;CL:0000084,2.87e-11,11;CL:0000827,2.87e-11,11;CL:0000838,3.83e-10,12;CL:0000893,1.80e-09,6;CL:0002489,1.80e-09,6;CL:0000898,1.80e-09,6;CL:0000809,1.80e-09,6;CL:0000810,1.80e-09,6;CL:0000895,1.80e-09,6;CL:0000808,1.80e-09,6;CL:0000894,1.80e-09,6;CL:0000806,1.80e-09,6;CL:0000807,1.80e-09,6;CL:0000805,1.80e-09,6;CL:0002425,1.80e-09,6;CL:0002436,1.80e-09,6;CL:0002427,1.80e-09,6;CL:0002428,1.80e-09,6;CL:0002429,1.80e-09,6;CL:0002433,1.80e-09,6;CL:0002431,1.80e-09,6;CL:0002432,1.80e-09,6;CL:0000542,3.42e-09,13;CL:0000051,3.42e-09,13
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006562!2.59e-11!24;UBERON:0001557!2.59e-11!24;UBERON:0001042!2.59e-11!24;UBERON:0008814!2.59e-11!24;UBERON:0009145!2.59e-11!24;UBERON:0002370!6.86e-11!23;UBERON:0000974!6.86e-11!23;UBERON:0004807!6.86e-11!23;UBERON:0005058!6.86e-11!23;UBERON:0003351!6.86e-11!23;UBERON:0009113!6.86e-11!23;UBERON:0003295!6.86e-11!23;UBERON:0009722!6.86e-11!23;UBERON:0005562!6.86e-11!23;UBERON:0007690!6.86e-11!23;UBERON:0004177!7.24e-11!29;UBERON:0003408!6.47e-10!24;UBERON:0000072!1.21e-08!27;UBERON:0007811!1.75e-08!86;UBERON:0000063!1.95e-08!35;UBERON:0000153!1.99e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0006562,1.15e-26,24;UBERON:0001557,1.15e-26,24;UBERON:0001042,1.15e-26,24;UBERON:0008814,1.15e-26,24;UBERON:0009145,1.15e-26,24;UBERON:0002370,1.03e-25,23;UBERON:0000974,1.03e-25,23;UBERON:0004807,1.03e-25,23;UBERON:0005058,1.03e-25,23;UBERON:0003351,1.03e-25,23;UBERON:0009113,1.03e-25,23;UBERON:0003295,1.03e-25,23;UBERON:0009722,1.03e-25,23;UBERON:0005562,1.03e-25,23;UBERON:0007690,1.03e-25,23;UBERON:0003408,2.25e-24,24;UBERON:0000072,5.84e-23,27;UBERON:0004177,5.63e-21,29;UBERON:0005057,5.63e-21,29;UBERON:0007811,6.21e-19,36;UBERON:0000077,4.02e-18,35;UBERON:0000153,1.02e-14,43;UBERON:0000065,3.86e-14,41;UBERON:0001004,1.20e-13,42;UBERON:0002193,2.31e-11,48;UBERON:0002405,2.31e-11,48;UBERON:0002390,2.90e-11,45;UBERON:0003061,2.90e-11,45;UBERON:0003929,2.78e-08,55;UBERON:0002368,4.02e-07,60;UBERON:0000490,9.94e-07,66
|phase1_expression=0.80074423552397,0,0,0,0,0,0,5.03580961422147,1.68946466582,2.34064526321993,1.36974374580404,1.51567102091139,6.84802919724823,4.37102012094987,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,0,0,5.80289713609076,5.04140698713696,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.856952953211411,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,1.5279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.898743836428936,1.83000241127451,0.502617408451458,0.521472960576829,0.255715457330331,1.66230435647648,1.29793010454206,0,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.468508622798644,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,0.617427674275707,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.275936746304732,1.76605648986571,1.99259867206745,0,1.00988370881749,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0,0,0.532020700926821,0,0.164549020602121,0,0,0,0.661585194164886,1.81374878235628,0.161464426695906,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,2.22510362412612,1.19609616558497,0.206386867963223,0.370389054739423,0.188368457004691,0.410082683163076,0.686334519619568,1.35982743995084,1.11961161858926,0.967399816630967,0.954670618015114,0.158167996790568,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0.288030006257865,4.74016680942267,1.82452693761148,2.87590680061516,2.5984164595559,3.22248052201467,2.18549490259391,4.68762253127878,4.13530676088816,3.93769154797776,3.81034033274999,4.33552596088414,4.19068887180935,4.52195655709548,7.01261413089414,1.13365191807606,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,0.564751842617067,1.38097570952153,0,1.03111909406213,0,0,0,0.45032120322422,0,1.55328093525546,0,0,0,0.972426868273176,0.209613162627982,1.10306105070008,1.11123363900808,1.23621034343337,0.64183841918363,1.26348605881899,0.760437899670719,1.13175804831646,0.749132059759059,0.448176066834085,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,0,1.03039244094078,0.342869252385415,0.532427418478012,0.953744759789284,0.145346416632329,0.470546902076653,0.930760686808441,0.182927972872773,0.789209134313529,1.35804113845862,0.561142271657738,0.949080144993393,1.18205378850676,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.233931608445408,0.859484216193193,1.53030665655075,1.76473135295612,1.15933917810211
|phase1_expression=0.80074423552397,0,0,0,0,0,0,5.03580961422147,1.68946466582,2.34064526321993,1.36974374580404,1.51567102091139,6.84802919724823,4.37102012094987,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,0,0,5.80289713609076,5.04140698713696,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.856952953211411,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,1.5279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.898743836428936,1.83000241127451,0.502617408451458,0.521472960576829,0.255715457330331,1.66230435647648,1.29793010454206,0,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.468508622798644,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,0.617427674275707,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.275936746304732,1.76605648986571,1.99259867206745,0,1.00988370881749,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0,0,0.532020700926821,0,0.164549020602121,0,0,0,0.661585194164886,1.81374878235628,0.161464426695906,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,2.22510362412612,1.19609616558497,0.206386867963223,0.370389054739423,0.188368457004691,0.410082683163076,0.686334519619568,1.35982743995084,1.11961161858926,0.967399816630967,0.954670618015114,0.158167996790568,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0.288030006257865,4.74016680942267,1.82452693761148,2.87590680061516,2.5984164595559,3.22248052201467,2.18549490259391,4.68762253127878,4.13530676088816,3.93769154797776,3.81034033274999,4.33552596088414,4.19068887180935,4.52195655709548,7.01261413089414,1.13365191807606,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,0.564751842617067,1.38097570952153,0,1.03111909406213,0,0,0,0.45032120322422,0,1.55328093525546,0,0,0,0.972426868273176,0.209613162627982,1.10306105070008,1.11123363900808,1.23621034343337,0.64183841918363,1.26348605881899,0.760437899670719,1.13175804831646,0.749132059759059,0.448176066834085,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,0,1.03039244094078,0.342869252385415,0.532427418478012,0.953744759789284,0.145346416632329,0.470546902076653,0.930760686808441,0.182927972872773,0.789209134313529,1.35804113845862,0.561142271657738,0.949080144993393,1.18205378850676,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.233931608445408,0.859484216193193,1.53030665655075,1.76473135295612,1.15933917810211
|short_description=p6@Prkcq
|short_description=p6@Prkcq
}}
}}

Latest revision as of 23:01, 1 October 2015

Short description:p6@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 69bp_to_ENSMUST00000114853_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E44.34
thymus, neonate N20.CNhs11186.820-7A24.19
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.80e-149
alpha-beta T cell2.80e-149
immature T cell2.80e-149
mature T cell2.80e-149
immature alpha-beta T cell2.80e-149
CD4-positive, alpha-beta T cell1.14e-128
T cell2.87e-1111
pro-T cell2.87e-1111
lymphoid lineage restricted progenitor cell3.83e-1012
thymocyte1.80e-096
double negative thymocyte1.80e-096
naive T cell1.80e-096
double-positive, alpha-beta thymocyte1.80e-096
CD4-positive, alpha-beta thymocyte1.80e-096
naive thymus-derived CD4-positive, alpha-beta T cell1.80e-096
DN4 thymocyte1.80e-096
DN1 thymic pro-T cell1.80e-096
DN2 thymocyte1.80e-096
DN3 thymocyte1.80e-096
immature single positive thymocyte1.80e-096
early T lineage precursor1.80e-096
mature CD4 single-positive thymocyte1.80e-096
resting double-positive thymocyte1.80e-096
double-positive blast1.80e-096
CD69-positive double-positive thymocyte1.80e-096
CD69-positive, CD4-positive single-positive thymocyte1.80e-096
CD4-positive, CD8-intermediate double-positive thymocyte1.80e-096
CD24-positive, CD4 single-positive thymocyte1.80e-096
lymphocyte3.42e-0913
common lymphoid progenitor3.42e-0913

Uber anatomy
Ontology termp-valuen
pharynx1.15e-2624
upper respiratory tract1.15e-2624
chordate pharynx1.15e-2624
pharyngeal arch system1.15e-2624
pharyngeal region of foregut1.15e-2624
thymus1.03e-2523
neck1.03e-2523
respiratory system epithelium1.03e-2523
hemolymphoid system gland1.03e-2523
pharyngeal epithelium1.03e-2523
thymic region1.03e-2523
pharyngeal gland1.03e-2523
entire pharyngeal arch endoderm1.03e-2523
thymus primordium1.03e-2523
early pharyngeal endoderm1.03e-2523
gland of gut2.25e-2424
segment of respiratory tract5.84e-2327
hemopoietic organ5.63e-2129
immune organ5.63e-2129
craniocervical region6.21e-1936
mixed endoderm/mesoderm-derived structure4.02e-1835
anterior region of body1.02e-1443
respiratory tract3.86e-1441
respiratory system1.20e-1342
hemolymphoid system2.31e-1148
immune system2.31e-1148
hematopoietic system2.90e-1145
blood island2.90e-1145
gut epithelium2.78e-0855
endocrine gland4.02e-0760
unilaminar epithelium9.94e-0766
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:11093809..11093826,%2B&oldid=4326932"