FFCP PHASE1:Hg19::chr13:30424397..30424406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=B2R4J1,O95164 | |UniProt=B2R4J1,O95164 | ||
|association_with_transcript=413bp_to_NM_007106,uc001usp.2_5end | |association_with_transcript=413bp_to_NM_007106,uc001usp.2_5end | ||
|cluster_id=chr13:30424397..30424406,- | |||
|description=CAGE_peak_11_at_UBL3_5end | |description=CAGE_peak_11_at_UBL3_5end | ||
|id=chr13:30424397..30424406,- | |id=chr13:30424397..30424406,- | ||
|ontology_enrichment_celltype=CL:0002620!7.86e-08!23 | |ontology_enrichment_celltype=CL:0002620!7.86e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.24e-34;19!CL:0002577;2.16e-21;3!CL:0002541;2.39e-21;3!CL:0002537;2.09e-13;5!CL:0000148;5.76e-11;10!CL:0000840;1.34e-10;5!CL:0000147;7.25e-08;14!CL:0000228;8.12e-08;1!CL:0002566;8.12e-08;1!CL:0002372;8.12e-08;1!CL:0000990;3.21e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.46e-34,19;CL:0002541,1.82e-21,3;CL:0002577,2.57e-21,3;CL:0002537,2.09e-13,5;CL:0000148,4.49e-11,10;CL:0000541,4.49e-11,10;CL:0000840,1.53e-10,5;CL:0001029,1.53e-10,5;CL:0002566,5.79e-08,1;CL:0000147,6.10e-08,14;CL:0000228,7.10e-08,1;CL:0002372,7.10e-08,1;CL:0000990,3.50e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.96e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-07;4!DOID:1612;1.46e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.59e-07,4;DOID:1612,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.33e-12!14;UBERON:0000158!1.33e-12!14;UBERON:0003124!2.45e-08!7;UBERON:0002097!2.01e-07!40;UBERON:0000478!2.06e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.27e-33;10!UBERON:0000158;4.27e-33;10!UBERON:0000478;4.59e-27;24!UBERON:0003124;2.39e-21;3!UBERON:0000920;2.39e-21;3!UBERON:0001987;3.43e-16;4!UBERON:0000305;4.06e-16;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.69e-47,14;UBERON:0000158,1.69e-47,14;UBERON:0003124,4.59e-35,7;UBERON:0000478,5.22e-27,24;UBERON:0000920,1.82e-21,3;UBERON:0001987,3.90e-16,4;UBERON:0004340,3.90e-16,4;UBERON:0000305,5.13e-16,7;UBERON:0004871,4.90e-14,8;UBERON:0004923,1.40e-10,66 | |||
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| ||
|short_description=p11@UBL3 | |short_description=p11@UBL3 | ||
}} | }} |
Latest revision as of 01:34, 17 September 2015
Short description: | p11@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 413bp_to_NM_007106, uc001usp.2_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | B2R4J1O95164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.46e-34 | 19 |
chorionic membrane mesenchymal stem cell | 1.82e-21 | 3 |
placental epithelial cell | 2.57e-21 | 3 |
amnion mesenchymal stem cell | 2.09e-13 | 5 |
melanocyte | 4.49e-11 | 10 |
melanoblast | 4.49e-11 | 10 |
immature conventional dendritic cell | 1.53e-10 | 5 |
common dendritic progenitor | 1.53e-10 | 5 |
dark melanocyte | 5.79e-08 | 1 |
pigment cell | 6.10e-08 | 14 |
multinucleate cell | 7.10e-08 | 1 |
myotube | 7.10e-08 | 1 |
conventional dendritic cell | 3.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.69e-47 | 14 |
membranous layer | 1.69e-47 | 14 |
chorion | 4.59e-35 | 7 |
extraembryonic structure | 5.22e-27 | 24 |
egg chorion | 1.82e-21 | 3 |
placenta | 3.90e-16 | 4 |
allantois | 3.90e-16 | 4 |
amnion | 5.13e-16 | 7 |
somatic layer of lateral plate mesoderm | 4.90e-14 | 8 |
organ component layer | 1.40e-10 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.59e-07 | 4 |
breast cancer | 1.59e-07 | 4 |