FFCP PHASE1:Mm9::chr5:130363312..130363350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100045688,14004,433806,665367 | |EntrezGene=100045688,14004,433806,665367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1L0,Q8K3S8 | |UniProt=Q9D1L0,Q8K3S8 | ||
|association_with_transcript=0bp_to_ENSMUST00000094280,NM_024166,uc008ztn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000094280,NM_024166,uc008ztn.1_5end | ||
|cluster_id=chr5:130363312..130363350,- | |||
|description=CAGE_peak_1_at_Chchd2_5end,CAGE_peak_1_at_Gm12350_5end,CAGE_peak_1_at_Gm13202_5end,CAGE_peak_1_at_LOC100045688_5end | |description=CAGE_peak_1_at_Chchd2_5end,CAGE_peak_1_at_Gm12350_5end,CAGE_peak_1_at_Gm13202_5end,CAGE_peak_1_at_LOC100045688_5end | ||
|id=chr5:130363312..130363350,- | |id=chr5:130363312..130363350,- | ||
|ontology_enrichment_celltype=CL:0000838!2.53e-08!12;CL:0000084!6.73e-08!11;CL:0000827!6.73e-08!11;CL:0000542!1.11e-07!13;CL:0000051!1.11e-07!13;CL:0000988!2.47e-07!32;CL:0002032!2.47e-07!32;CL:0000037!2.47e-07!32;CL:0000566!2.47e-07!32;CL:0000837!2.47e-07!32;CL:0000791!4.46e-07!9;CL:0000789!4.46e-07!9;CL:0002420!4.46e-07!9;CL:0002419!4.46e-07!9;CL:0000790!4.46e-07!9 | |ontology_enrichment_celltype=CL:0000838!2.53e-08!12;CL:0000084!6.73e-08!11;CL:0000827!6.73e-08!11;CL:0000542!1.11e-07!13;CL:0000051!1.11e-07!13;CL:0000988!2.47e-07!32;CL:0002032!2.47e-07!32;CL:0000037!2.47e-07!32;CL:0000566!2.47e-07!32;CL:0000837!2.47e-07!32;CL:0000791!4.46e-07!9;CL:0000789!4.46e-07!9;CL:0002420!4.46e-07!9;CL:0002419!4.46e-07!9;CL:0000790!4.46e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.84e-13,12;CL:0000084,1.55e-12,11;CL:0000827,1.55e-12,11;CL:0000988,1.66e-12,32;CL:0002032,1.66e-12,32;CL:0000037,1.66e-12,32;CL:0000837,1.66e-12,32;CL:0000542,6.17e-12,13;CL:0000051,6.17e-12,13;CL:0000791,4.03e-11,9;CL:0000789,4.03e-11,9;CL:0002420,4.03e-11,9;CL:0002419,4.03e-11,9;CL:0000790,4.03e-11,9;CL:0000624,4.63e-10,8;CL:0002031,1.38e-08,25;CL:0000738,3.31e-08,17;CL:0002087,3.31e-08,17;CL:0000893,5.55e-08,6;CL:0002489,5.55e-08,6;CL:0000898,5.55e-08,6;CL:0000809,5.55e-08,6;CL:0000810,5.55e-08,6;CL:0000895,5.55e-08,6;CL:0000808,5.55e-08,6;CL:0000894,5.55e-08,6;CL:0000806,5.55e-08,6;CL:0000807,5.55e-08,6;CL:0000805,5.55e-08,6;CL:0002425,5.55e-08,6;CL:0002436,5.55e-08,6;CL:0002427,5.55e-08,6;CL:0002428,5.55e-08,6;CL:0002429,5.55e-08,6;CL:0002433,5.55e-08,6;CL:0002431,5.55e-08,6;CL:0002432,5.55e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.75e-12!48;UBERON:0004177!9.63e-11!29;UBERON:0002390!1.18e-10!45;UBERON:0003061!1.18e-10!45;UBERON:0002370!1.36e-09!23;UBERON:0000974!1.36e-09!23;UBERON:0004807!1.36e-09!23;UBERON:0005058!1.36e-09!23;UBERON:0003351!1.36e-09!23;UBERON:0009113!1.36e-09!23;UBERON:0003295!1.36e-09!23;UBERON:0009722!1.36e-09!23;UBERON:0005562!1.36e-09!23;UBERON:0007690!1.36e-09!23;UBERON:0003408!1.92e-09!24;UBERON:0000072!1.02e-08!27;UBERON:0006562!1.59e-08!24;UBERON:0001557!1.59e-08!24;UBERON:0001042!1.59e-08!24;UBERON:0008814!1.59e-08!24;UBERON:0009145!1.59e-08!24;UBERON:0002405!6.58e-08!70 | |ontology_enrichment_uberon=UBERON:0002193!8.75e-12!48;UBERON:0004177!9.63e-11!29;UBERON:0002390!1.18e-10!45;UBERON:0003061!1.18e-10!45;UBERON:0002370!1.36e-09!23;UBERON:0000974!1.36e-09!23;UBERON:0004807!1.36e-09!23;UBERON:0005058!1.36e-09!23;UBERON:0003351!1.36e-09!23;UBERON:0009113!1.36e-09!23;UBERON:0003295!1.36e-09!23;UBERON:0009722!1.36e-09!23;UBERON:0005562!1.36e-09!23;UBERON:0007690!1.36e-09!23;UBERON:0003408!1.92e-09!24;UBERON:0000072!1.02e-08!27;UBERON:0006562!1.59e-08!24;UBERON:0001557!1.59e-08!24;UBERON:0001042!1.59e-08!24;UBERON:0008814!1.59e-08!24;UBERON:0009145!1.59e-08!24;UBERON:0002405!6.58e-08!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-18,23;UBERON:0000974,1.40e-18,23;UBERON:0004807,1.40e-18,23;UBERON:0005058,1.40e-18,23;UBERON:0003351,1.40e-18,23;UBERON:0009113,1.40e-18,23;UBERON:0003295,1.40e-18,23;UBERON:0009722,1.40e-18,23;UBERON:0005562,1.40e-18,23;UBERON:0007690,1.40e-18,23;UBERON:0006562,1.74e-17,24;UBERON:0003408,1.74e-17,24;UBERON:0001557,1.74e-17,24;UBERON:0001042,1.74e-17,24;UBERON:0008814,1.74e-17,24;UBERON:0009145,1.74e-17,24;UBERON:0002193,2.65e-17,48;UBERON:0002405,2.65e-17,48;UBERON:0000072,3.39e-17,27;UBERON:0004177,5.46e-16,29;UBERON:0005057,5.46e-16,29;UBERON:0002390,2.08e-15,45;UBERON:0003061,2.08e-15,45;UBERON:0000077,6.78e-12,35;UBERON:0000065,2.13e-11,41;UBERON:0001004,6.22e-11,42;UBERON:0007811,2.91e-09,36;UBERON:0000153,5.15e-09,43;UBERON:0003929,2.32e-07,55;UBERON:0000490,6.44e-07,66 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,13.5579489613655,9.15126693985834,17.5548394741495,18.1491046319035,20.2621283848154,10.1008430659411,14.7740480088106,0.999329285446988,1.82227740650843,0.699561878128147,5.36285681109004,5.07323404341233,3.39511721438424,2.38121212422995,2.87943758482567,2.87319768052829,1.75991665072747,1.60586496747019,0.57423196411502,1.29228598847722,1.29282739611533,0.950117097281869,0.756090389279792,1.10865255327652,0.635030673459631,0,0,0.866554859253824,0.664938581433969,1.42918549383658,2.51118978442145,7.813353445238,4.71171369576418,3.52938892818609,2.04913645487534,5.34061388334269,0,0,0,0,1.09012578190223,0.439372365468944,0.388859798148567,0.699932108126813,0,3.02008690903925,12.3311564141929,13.779845764841,0.514518872071894,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0,0,1.14058573539325,1.62007125998029,1.68259969081106,0.571301968807607,1.32521124570968,2.69479758272899,3.64212789869298,6.43453150627015,2.20231761998777,0.255374676170375,0.46081959976873,0.527545150920775,0.182975287204819,0.52091337055676,0.837548997004143,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.37863096666592,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,1.01104889002957,1.7127581957859,2.07150306917737,0.148442139064825,0.693941307064543,0.304465478312141,0,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0.289198713839823,0.884610551949874,0.647067399789637,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0.510914110417183,4.07371423320129,5.99902730993408,3.81210681219194,0,1.83000241127451,11.8115090986093,0,0,0.41557608911912,0.324482526135515,0.407357455401265,0.995255764880744,0.252722758433675,0,0.650602214813519,0.459804208866946,0,0.150704817835715,0.272145996605311,0.768682321709099,0.0937017245597288,0,1.94011193639558,0.756424320671277,0.703804496655795,1.31517439456545,1.11218899690239,0,0.205782136407943,0.796137067273973,7.02213187313235,3.86021860672073,3.40996199274711,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.462801338662135,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.438599962275997,0.219550115291051,0.402619256281115,0.420579897128254,0.92614151141356,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,1.51734320762465,0.799739588268102,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.442655759869801,0.147610147979602,0.470996183524124,0.616985819609003,0.592905254174298,1.16791574001266,0.589676985339609,0.224862112384854,1.42002084971952,1.4470629585145,0.25462585178142,0.575392274901621,1.13494658742525,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,0.554259570499814,1.13694847062291,0.651859905768103,1.35796068620151,0.938760993154008,1.34005005953453,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0.867894351489069,0,0.54390568381871,0,0.551873492609465,0,0,0,0.252470927204373,1.89304931649754,0.780877488593277,0,0.477937595905104,0.445597348164788,0,0,0.876767573733936,0,0,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0.885905678642318,0,0,0.363533729477506,1.06949213515416,0,0,0,0,0.540183282093931,0.258717367565509,0.643011105094777,0.177340233642274,0.891844088010353,0.164549020602121,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.422190474497091,1.07435109602823,0.820704498725306,1.45740418314925,0,1.87957968877638,0.82554747185289,0.740778109478847,0.941842285023455,1.6403307326523,0.915112692826091,3.0596117398894,2.51912614182584,4.69879910935041,0,0.790839983952838,0.406638934253697,0.648032044930808,0.836353184057875,1.09181281873089,0.269728692769641,0.495920734352016,0,0.518459893167171,0.621339313086926,5.6369293868419,1.19613236835183,0.66183396182839,0.194451188344048,0,0.337912250981556,0.469428954583016,0.651021924219751,0.734015410979976,4.1069300540421,4.32045009386798,22.1207784439725,1.01362607645082,4.10843828659309,9.61414090035683,8.77230808770659,10.3314304486258,17.6687310794354,15.0643317718069,16.8613971413407,23.77652367636,21.1734988787365,19.1992025057312,22.2249354189161,19.2846888599589,0,0.665957860122194,0.269141569828427,0.839423081820392,0.386379188064381,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0.572895513439397,0.687412729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| ||
|short_description=p1@Chchd2,p1@Gm12350,p1@Gm13202,p1@LOC100045688 | |short_description=p1@Chchd2,p1@Gm12350,p1@Gm13202,p1@LOC100045688 | ||
}} | }} |
Latest revision as of 22:51, 1 October 2015
Short description: | p1@Chchd2, p1@Gm12350, p1@Gm13202, p1@LOC100045688 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chchd2_5end, CAGE_peak_1_at_Gm12350_5end, CAGE_peak_1_at_Gm13202_5end, CAGE_peak_1_at_LOC100045688_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000094280, NM_024166, uc008ztn.1_5end |
EntrezGene: | 100045688,14004,433806,665367 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-18 | 23 |
neck | 1.40e-18 | 23 |
respiratory system epithelium | 1.40e-18 | 23 |
hemolymphoid system gland | 1.40e-18 | 23 |
pharyngeal epithelium | 1.40e-18 | 23 |
thymic region | 1.40e-18 | 23 |
pharyngeal gland | 1.40e-18 | 23 |
entire pharyngeal arch endoderm | 1.40e-18 | 23 |
thymus primordium | 1.40e-18 | 23 |
early pharyngeal endoderm | 1.40e-18 | 23 |
pharynx | 1.74e-17 | 24 |
gland of gut | 1.74e-17 | 24 |
upper respiratory tract | 1.74e-17 | 24 |
chordate pharynx | 1.74e-17 | 24 |
pharyngeal arch system | 1.74e-17 | 24 |
pharyngeal region of foregut | 1.74e-17 | 24 |
hemolymphoid system | 2.65e-17 | 48 |
immune system | 2.65e-17 | 48 |
segment of respiratory tract | 3.39e-17 | 27 |
hemopoietic organ | 5.46e-16 | 29 |
immune organ | 5.46e-16 | 29 |
hematopoietic system | 2.08e-15 | 45 |
blood island | 2.08e-15 | 45 |
mixed endoderm/mesoderm-derived structure | 6.78e-12 | 35 |
respiratory tract | 2.13e-11 | 41 |
respiratory system | 6.22e-11 | 42 |
craniocervical region | 2.91e-09 | 36 |
anterior region of body | 5.15e-09 | 43 |
gut epithelium | 2.32e-07 | 55 |
unilaminar epithelium | 6.44e-07 | 66 |