FFCP PHASE1:Hg19::chr14:105190558..105190573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122622 | |EntrezGene=122622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20093 | |HGNC=20093 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N142 | |UniProt=Q8N142 | ||
|association_with_transcript=24bp_to_NM_152328,uc001ypd.2_5end | |association_with_transcript=24bp_to_NM_152328,uc001ypd.2_5end | ||
|cluster_id=chr14:105190558..105190573,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_ADSSL1_5end | |description=CAGE_peak_1_at_ADSSL1_5end | ||
|id=chr14:105190558..105190573,+ | |id=chr14:105190558..105190573,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.44e-09!45;CL:0002057!4.02e-08!42 | |ontology_enrichment_celltype=CL:0000860!2.44e-09!45;CL:0002057!4.02e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-16;33!CL:0002057;2.61e-16;33!CL:0000473;1.48e-10;39!CL:0000234;1.48e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.51e-11,42;CL:0002057,3.51e-11,42;CL:0000473,7.10e-09,48;CL:0000234,7.10e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;7.88e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-16!115;UBERON:0000062!1.65e-10!511;UBERON:0004119!6.27e-09!169;UBERON:0000925!6.27e-09!169;UBERON:0006595!6.27e-09!169;UBERON:0000468!2.48e-08!659;UBERON:0004921!6.35e-08!129;UBERON:0004185!6.35e-08!129;UBERON:0001041!7.10e-08!98;UBERON:0000077!3.24e-07!130;UBERON:0003075!4.52e-07!86;UBERON:0007284!4.52e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.64e-19,114;UBERON:0001041,2.89e-09,87;UBERON:0004119,1.25e-07,160;UBERON:0000925,1.25e-07,160;UBERON:0006595,1.25e-07,160;UBERON:0004921,2.02e-07,118;UBERON:0003075,3.85e-07,82;UBERON:0007284,3.85e-07,82;UBERON:0001049,4.60e-07,56;UBERON:0005068,4.60e-07,56;UBERON:0006241,4.60e-07,56;UBERON:0007135,4.60e-07,56;UBERON:0011216,5.96e-07,223 | |||
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| ||
|short_description=p1@ADSSL1 | |short_description=p1@ADSSL1 | ||
}} | }} |
Latest revision as of 17:24, 18 September 2015
Short description: | p1@ADSSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADSSL1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 24bp_to_NM_152328, uc001ypd.2_5end |
EntrezGene: | ADSSL1 |
HGNC: | 20093 |
UniProt: | Q8N142 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.51e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.51e-11 | 42 |
defensive cell | 7.10e-09 | 48 |
phagocyte | 7.10e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.64e-19 | 114 |
foregut | 2.89e-09 | 87 |
endoderm-derived structure | 1.25e-07 | 160 |
endoderm | 1.25e-07 | 160 |
presumptive endoderm | 1.25e-07 | 160 |
subdivision of digestive tract | 2.02e-07 | 118 |
neural plate | 3.85e-07 | 82 |
presumptive neural plate | 3.85e-07 | 82 |
neural tube | 4.60e-07 | 56 |
neural rod | 4.60e-07 | 56 |
future spinal cord | 4.60e-07 | 56 |
neural keel | 4.60e-07 | 56 |
organ system subdivision | 5.96e-07 | 223 |