FFCP PHASE1:Hg19::chr10:28367095..28367106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28367095..28367106,+ | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_at_chr10:28367095..28367106,+ | |description=CAGE_peak_at_chr10:28367095..28367106,+ | ||
|id=chr10:28367095..28367106,+ | |id=chr10:28367095..28367106,+ | ||
|ontology_enrichment_celltype=CL:0002149!4.10e-07!6;CL:0002255!4.10e-07!6;CL:0002166!9.08e-07!3 | |ontology_enrichment_celltype=CL:0002149!4.10e-07!6;CL:0002255!4.10e-07!6;CL:0002166!9.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000243;2.23e-12;15!CL:0000125;2.23e-12;15!CL:0000095;3.80e-11;17!CL:0002319;5.00e-08;25!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.06e-12,15;CL:0000125,2.06e-12,15;CL:0000030,2.06e-12,15;CL:0000339,2.06e-12,15;CL:0000095,3.55e-11,17;CL:0000123,3.55e-11,17;CL:0002319,4.76e-08,25;CL:0000306,8.14e-07,4;CL:0002222,8.14e-07,4;CL:0002224,8.14e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006238;9.78e-19;10!CL:0000339;2.23e-12;15!UBERON:0008814;3.06e-12;2!UBERON:0010056;3.06e-12;2 | |||
|ontology_enrichment_disease=DOID:120!4.25e-25!27;DOID:193!3.59e-23!29;DOID:2394!6.12e-11!14;DOID:4468!1.84e-10!2;DOID:3001!4.10e-07!6 | |ontology_enrichment_disease=DOID:120!4.25e-25!27;DOID:193!3.59e-23!29;DOID:2394!6.12e-11!14;DOID:4468!1.84e-10!2;DOID:3001!4.10e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.08e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.75e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0003134!3.53e-12!37;UBERON:0000474!3.53e-12!37;UBERON:0003100!8.79e-11!41;UBERON:0003133!6.64e-09!48;UBERON:0002118!9.76e-09!5;UBERON:0004532!9.76e-09!5;UBERON:0000992!2.74e-08!13;UBERON:0005156!2.91e-08!59;UBERON:0000990!2.91e-08!59;UBERON:0001723!2.26e-07!3;UBERON:0001033!2.26e-07!3;UBERON:0010056!2.26e-07!3;UBERON:0000002!3.61e-07!6;UBERON:0001560!3.61e-07!6;UBERON:0000995!5.51e-07!21 | |ontology_enrichment_uberon=UBERON:0003134!3.53e-12!37;UBERON:0000474!3.53e-12!37;UBERON:0003100!8.79e-11!41;UBERON:0003133!6.64e-09!48;UBERON:0002118!9.76e-09!5;UBERON:0004532!9.76e-09!5;UBERON:0000992!2.74e-08!13;UBERON:0005156!2.91e-08!59;UBERON:0000990!2.91e-08!59;UBERON:0001723!2.26e-07!3;UBERON:0001033!2.26e-07!3;UBERON:0010056!2.26e-07!3;UBERON:0000002!3.61e-07!6;UBERON:0001560!3.61e-07!6;UBERON:0000995!5.51e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.50e-30;3!UBERON:0001033;6.50e-30;3!UBERON:0002372;4.59e-23;1!UBERON:0001961;4.59e-23;1!UBERON:0001744;4.59e-23;1!UBERON:0001042;4.59e-23;1!UBERON:0001735;4.59e-23;1!UBERON:0000341;1.96e-12;2!UBERON:0006562;3.06e-12;2!UBERON:0000020;3.12e-09;23!UBERON:0001032;7.12e-09;24!UBERON:0004456;7.12e-09;24!UBERON:0000165;1.15e-07;28!UBERON:0000153;2.96e-07;54!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.54e-30,3;UBERON:0001033,7.54e-30,3;UBERON:0010056,7.54e-30,3;UBERON:0002372,5.13e-23,1;UBERON:0001961,5.13e-23,1;UBERON:0001744,5.13e-23,1;UBERON:0001735,5.13e-23,1;UBERON:0001042,3.25e-20,10;UBERON:0009145,3.25e-20,10;UBERON:0006562,1.90e-18,11;UBERON:0000341,2.07e-12,2;UBERON:0008814,1.15e-11,18;UBERON:0001557,5.56e-11,19;UBERON:0000166,1.43e-09,22;UBERON:0000153,5.24e-09,62;UBERON:0007811,5.24e-09,62;UBERON:0000020,7.32e-09,24;UBERON:0001032,7.32e-09,24;UBERON:0004456,7.32e-09,24;UBERON:0001444,1.61e-07,49;UBERON:0000165,2.08e-07,29;UBERON:0000930,2.08e-07,29;UBERON:0010077,8.14e-07,4;UBERON:0005389,8.14e-07,4;UBERON:0000484,8.14e-07,4;UBERON:0002546,8.14e-07,4;UBERON:0000965,8.14e-07,4;UBERON:0001803,8.14e-07,4;UBERON:0003073,8.14e-07,4;UBERON:0005426,8.14e-07,4 | |||
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| ||
|short_description=p@chr10:28367095..28367106,+ | |short_description=p@chr10:28367095..28367106,+ | ||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28367095..28367106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28367095..28367106, + |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.06e-12 | 15 |
glial cell | 2.06e-12 | 15 |
glioblast | 2.06e-12 | 15 |
glioblast (sensu Vertebrata) | 2.06e-12 | 15 |
neuron associated cell | 3.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 3.55e-11 | 17 |
neural cell | 4.76e-08 | 25 |
crystallin accumulating cell | 8.14e-07 | 4 |
vertebrate lens cell | 8.14e-07 | 4 |
lens epithelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.54e-30 | 3 |
gustatory system | 7.54e-30 | 3 |
future tongue | 7.54e-30 | 3 |
tonsil | 5.13e-23 | 1 |
mucosa-associated lymphoid tissue | 5.13e-23 | 1 |
lymphoid tissue | 5.13e-23 | 1 |
tonsillar ring | 5.13e-23 | 1 |
chordate pharynx | 3.25e-20 | 10 |
pharyngeal region of foregut | 3.25e-20 | 10 |
pharynx | 1.90e-18 | 11 |
throat | 2.07e-12 | 2 |
pharyngeal arch system | 1.15e-11 | 18 |
upper respiratory tract | 5.56e-11 | 19 |
oral opening | 1.43e-09 | 22 |
anterior region of body | 5.24e-09 | 62 |
craniocervical region | 5.24e-09 | 62 |
sense organ | 7.32e-09 | 24 |
sensory system | 7.32e-09 | 24 |
entire sense organ system | 7.32e-09 | 24 |
subdivision of head | 1.61e-07 | 49 |
mouth | 2.08e-07 | 29 |
stomodeum | 2.08e-07 | 29 |
cuboidal epithelium | 8.14e-07 | 4 |
transparent eye structure | 8.14e-07 | 4 |
simple cuboidal epithelium | 8.14e-07 | 4 |
cranial placode | 8.14e-07 | 4 |
lens of camera-type eye | 8.14e-07 | 4 |
epithelium of lens | 8.14e-07 | 4 |
lens placode | 8.14e-07 | 4 |
lens vesicle | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.75e-17 | 11 |