FFCP PHASE1:Hg19::chr10:51572339..51572376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8031 | |EntrezGene=8031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7671 | |HGNC=7671 | ||
|TSSclassifier=strong | |||
|UniProt=Q13772,A8K8W5,Q96E88 | |UniProt=Q13772,A8K8W5,Q96E88 | ||
|association_with_transcript=0bp_to_ENST00000344348,NM_005437,uc001jit.2_5end | |association_with_transcript=0bp_to_ENST00000344348,NM_005437,uc001jit.2_5end | ||
|cluster_id=chr10:51572339..51572376,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_NCOA4_5end | |description=CAGE_peak_4_at_NCOA4_5end | ||
|id=chr10:51572339..51572376,+ | |id=chr10:51572339..51572376,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.23e-32!112;CL:0000049!1.23e-32!112;CL:0000766!3.47e-30!76;CL:0000839!4.33e-27!70;CL:0000557!6.26e-27!71;CL:0002009!3.04e-26!65;CL:0002057!7.97e-26!42;CL:0002194!1.35e-25!63;CL:0000576!1.35e-25!63;CL:0000040!1.35e-25!63;CL:0000559!1.35e-25!63;CL:0000860!1.42e-25!45;CL:0000037!1.67e-11!172;CL:0000566!1.67e-11!172;CL:0002032!3.33e-10!165;CL:0000837!3.33e-10!165;CL:0000988!4.53e-09!182;CL:0000738!9.22e-09!140;CL:0000134!5.78e-07!358 | |ontology_enrichment_celltype=CL:0000763!1.23e-32!112;CL:0000049!1.23e-32!112;CL:0000766!3.47e-30!76;CL:0000839!4.33e-27!70;CL:0000557!6.26e-27!71;CL:0002009!3.04e-26!65;CL:0002057!7.97e-26!42;CL:0002194!1.35e-25!63;CL:0000576!1.35e-25!63;CL:0000040!1.35e-25!63;CL:0000559!1.35e-25!63;CL:0000860!1.42e-25!45;CL:0000037!1.67e-11!172;CL:0000566!1.67e-11!172;CL:0002032!3.33e-10!165;CL:0000837!3.33e-10!165;CL:0000988!4.53e-09!182;CL:0000738!9.22e-09!140;CL:0000134!5.78e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-21;33!CL:0002057;1.25e-21;33!CL:0000473;4.47e-21;39!CL:0000234;4.47e-21;39!CL:0000576;1.67e-17;48!CL:0000766;7.82e-16;69!CL:0000763;2.78e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.40e-35,108;CL:0000049,6.40e-35,108;CL:0000766,2.84e-32,72;CL:0000473,8.56e-32,48;CL:0000234,8.56e-32,48;CL:0000839,7.13e-29,66;CL:0000557,1.09e-28,67;CL:0000860,3.00e-28,42;CL:0002057,3.00e-28,42;CL:0002009,3.94e-28,61;CL:0002194,1.99e-27,59;CL:0000576,1.99e-27,59;CL:0000040,1.99e-27,59;CL:0000559,1.99e-27,59;CL:0000037,9.22e-14,168;CL:0002032,3.94e-12,161;CL:0000837,3.94e-12,161;CL:0000988,1.91e-11,177;CL:0000738,1.30e-10,136;CL:0000134,4.54e-08,354;CL:0002320,1.13e-07,361;CL:0000034,1.67e-07,441;CL:0002031,6.96e-07,120;CL:0000048,7.47e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-20;42!CL:0000049;3.19e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.47e-26!102;UBERON:0003061!3.47e-26!102;UBERON:0002193!1.77e-23!112;UBERON:0002371!6.53e-23!80;UBERON:0001474!1.92e-21!86;UBERON:0004765!1.46e-18!101;UBERON:0001434!1.46e-18!101;UBERON:0002405!2.92e-17!115;UBERON:0003081!1.39e-15!216;UBERON:0002204!4.78e-13!167;UBERON:0000926!1.69e-10!448;UBERON:0004120!1.69e-10!448;UBERON:0006603!1.69e-10!448 | |ontology_enrichment_uberon=UBERON:0002390!3.47e-26!102;UBERON:0003061!3.47e-26!102;UBERON:0002193!1.77e-23!112;UBERON:0002371!6.53e-23!80;UBERON:0001474!1.92e-21!86;UBERON:0004765!1.46e-18!101;UBERON:0001434!1.46e-18!101;UBERON:0002405!2.92e-17!115;UBERON:0003081!1.39e-15!216;UBERON:0002204!4.78e-13!167;UBERON:0000926!1.69e-10!448;UBERON:0004120!1.69e-10!448;UBERON:0006603!1.69e-10!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-29,98;UBERON:0003061,1.89e-29,98;UBERON:0002193,3.67e-26,108;UBERON:0002371,4.61e-25,76;UBERON:0001474,7.05e-24,82;UBERON:0004765,1.18e-22,90;UBERON:0002405,5.88e-21,93;UBERON:0001434,5.33e-20,100;UBERON:0003081,1.16e-18,203;UBERON:0002204,3.53e-13,167;UBERON:0000926,8.63e-13,315;UBERON:0004120,8.63e-13,315;UBERON:0006603,8.63e-13,315;UBERON:0002384,5.25e-07,371 | |||
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| ||
|short_description=p4@NCOA4 | |short_description=p4@NCOA4 | ||
}} | }} |
Latest revision as of 10:34, 18 September 2015
Short description: | p4@NCOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCOA4_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000344348, NM_005437, uc001jit.2_5end |
EntrezGene: | NCOA4 |
HGNC: | 7671 |
UniProt: | Q13772A8K8W5Q96E88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.40e-35 | 108 |
common myeloid progenitor | 6.40e-35 | 108 |
myeloid leukocyte | 2.84e-32 | 72 |
defensive cell | 8.56e-32 | 48 |
phagocyte | 8.56e-32 | 48 |
myeloid lineage restricted progenitor cell | 7.13e-29 | 66 |
granulocyte monocyte progenitor cell | 1.09e-28 | 67 |
classical monocyte | 3.00e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-28 | 42 |
macrophage dendritic cell progenitor | 3.94e-28 | 61 |
monopoietic cell | 1.99e-27 | 59 |
monocyte | 1.99e-27 | 59 |
monoblast | 1.99e-27 | 59 |
promonocyte | 1.99e-27 | 59 |
hematopoietic stem cell | 9.22e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.94e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.94e-12 | 161 |
hematopoietic cell | 1.91e-11 | 177 |
leukocyte | 1.30e-10 | 136 |
mesenchymal cell | 4.54e-08 | 354 |
connective tissue cell | 1.13e-07 | 361 |
stem cell | 1.67e-07 | 441 |
hematopoietic lineage restricted progenitor cell | 6.96e-07 | 120 |
multi fate stem cell | 7.47e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-29 | 98 |
blood island | 1.89e-29 | 98 |
hemolymphoid system | 3.67e-26 | 108 |
bone marrow | 4.61e-25 | 76 |
bone element | 7.05e-24 | 82 |
skeletal element | 1.18e-22 | 90 |
immune system | 5.88e-21 | 93 |
skeletal system | 5.33e-20 | 100 |
lateral plate mesoderm | 1.16e-18 | 203 |
musculoskeletal system | 3.53e-13 | 167 |
mesoderm | 8.63e-13 | 315 |
mesoderm-derived structure | 8.63e-13 | 315 |
presumptive mesoderm | 8.63e-13 | 315 |
connective tissue | 5.25e-07 | 371 |