FFCP PHASE1:Hg19::chr10:72370054..72370064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000500803_5end | |association_with_transcript=-8bp_to_ENST00000500803_5end | ||
|cluster_id=chr10:72370054..72370064,+ | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_1_at_ENST00000500803_5end | |description=CAGE_peak_1_at_ENST00000500803_5end | ||
|id=chr10:72370054..72370064,+ | |id=chr10:72370054..72370064,+ | ||
|ontology_enrichment_celltype=CL:0002127!7.57e-17!1;CL:0000914!7.57e-17!1;CL:0000911!7.57e-17!1;CL:0000814!7.57e-17!1;CL:0002042!7.57e-17!1;CL:0002039!7.57e-17!1;CL:0002040!7.57e-17!1;CL:0002041!7.57e-17!1;CL:0000084!3.92e-10!25;CL:0000827!3.92e-10!25;CL:0000893!4.34e-09!2;CL:0002489!4.34e-09!2;CL:0000809!4.34e-09!2;CL:0000808!4.34e-09!2;CL:0000894!4.34e-09!2;CL:0000806!4.34e-09!2;CL:0000807!4.34e-09!2;CL:0000805!4.34e-09!2;CL:0002425!4.34e-09!2;CL:0000791!2.71e-08!18;CL:0000789!2.71e-08!18;CL:0002420!2.71e-08!18;CL:0002419!2.71e-08!18;CL:0000790!2.71e-08!18;CL:0000838!2.29e-07!52;CL:0000542!3.16e-07!53;CL:0000051!3.16e-07!53 | |ontology_enrichment_celltype=CL:0002127!7.57e-17!1;CL:0000914!7.57e-17!1;CL:0000911!7.57e-17!1;CL:0000814!7.57e-17!1;CL:0002042!7.57e-17!1;CL:0002039!7.57e-17!1;CL:0002040!7.57e-17!1;CL:0002041!7.57e-17!1;CL:0000084!3.92e-10!25;CL:0000827!3.92e-10!25;CL:0000893!4.34e-09!2;CL:0002489!4.34e-09!2;CL:0000809!4.34e-09!2;CL:0000808!4.34e-09!2;CL:0000894!4.34e-09!2;CL:0000806!4.34e-09!2;CL:0000807!4.34e-09!2;CL:0000805!4.34e-09!2;CL:0002425!4.34e-09!2;CL:0000791!2.71e-08!18;CL:0000789!2.71e-08!18;CL:0002420!2.71e-08!18;CL:0002419!2.71e-08!18;CL:0000790!2.71e-08!18;CL:0000838!2.29e-07!52;CL:0000542!3.16e-07!53;CL:0000051!3.16e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.99e-50;1!CL:0000911;3.99e-50;1!CL:0000814;3.99e-50;1!CL:0000243;1.09e-12;15!CL:0000125;1.09e-12;15!CL:0000095;1.81e-11;17!CL:0002319;2.22e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.58e-50,1;CL:0000914,6.58e-50,1;CL:0000911,6.58e-50,1;CL:0000814,6.58e-50,1;CL:0002042,6.58e-50,1;CL:0002039,6.58e-50,1;CL:0002040,6.58e-50,1;CL:0002041,6.58e-50,1;CL:0000893,9.18e-26,2;CL:0002489,9.18e-26,2;CL:0000809,9.18e-26,2;CL:0000808,9.18e-26,2;CL:0000894,9.18e-26,2;CL:0000806,9.18e-26,2;CL:0000807,9.18e-26,2;CL:0000805,9.18e-26,2;CL:0002425,9.18e-26,2;CL:0000243,1.03e-12,15;CL:0000125,1.03e-12,15;CL:0000030,1.03e-12,15;CL:0000339,1.03e-12,15;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002425;7.14e-26;2!UBERON:0006238;5.63e-19;10!UBERON:0003056;9.45e-18;3!CL:0000339;1.09e-12;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.71e-17;11!DOID:5409;8.81e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.57e-17,11;DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0003351,1.57e-09,6;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0004807,3.92e-08,28 | |||
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|short_description=p1@ENST00000500803 | |short_description=p1@ENST00000500803 | ||
}} | }} |
Latest revision as of 15:12, 23 July 2015
Short description: | p1@ENST00000500803 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000500803_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | -8bp_to_ENST00000500803_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.58e-50 | 1 |
immature NK T cell | 6.58e-50 | 1 |
effector T cell | 6.58e-50 | 1 |
mature NK T cell | 6.58e-50 | 1 |
immature NK T cell stage IV | 6.58e-50 | 1 |
immature NK T cell stage I | 6.58e-50 | 1 |
immature NK T cell stage II | 6.58e-50 | 1 |
immature NK T cell stage III | 6.58e-50 | 1 |
thymocyte | 9.18e-26 | 2 |
double negative thymocyte | 9.18e-26 | 2 |
double-positive, alpha-beta thymocyte | 9.18e-26 | 2 |
DN4 thymocyte | 9.18e-26 | 2 |
DN1 thymic pro-T cell | 9.18e-26 | 2 |
DN2 thymocyte | 9.18e-26 | 2 |
DN3 thymocyte | 9.18e-26 | 2 |
immature single positive thymocyte | 9.18e-26 | 2 |
early T lineage precursor | 9.18e-26 | 2 |
glial cell (sensu Vertebrata) | 1.03e-12 | 15 |
glial cell | 1.03e-12 | 15 |
glioblast | 1.03e-12 | 15 |
glioblast (sensu Vertebrata) | 1.03e-12 | 15 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
pharyngeal epithelium | 1.57e-09 | 6 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
respiratory system epithelium | 3.92e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.57e-17 | 11 |
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |