FFCP PHASE1:Hg19::chr15:101256250..101256271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-182bp_to_ENST00000559755_5end | |association_with_transcript=-182bp_to_ENST00000559755_5end | ||
|cluster_id=chr15:101256250..101256271,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_ENST00000559755_5end | |description=CAGE_peak_1_at_ENST00000559755_5end | ||
|id=chr15:101256250..101256271,+ | |id=chr15:101256250..101256271,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;8.57e-11;3!CL:0002563;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.99e-11,3;CL:0002563,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.37e-12;10!UBERON:0007687;2.37e-12;10 | |||
|ontology_enrichment_disease=DOID:4468!8.04e-16!2;DOID:305!1.51e-10!106;DOID:0050687!2.25e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.66e-15;2!DOID:4468;1.66e-15;2!DOID:3908;5.54e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.54e-15,2;DOID:3910,1.78e-15,2;DOID:3908,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.32e-16!4;UBERON:0003928!1.32e-16!4;UBERON:0002294!1.62e-16!7;UBERON:0001173!1.62e-16!7;UBERON:0004912!1.62e-16!7;UBERON:0001737!8.49e-13!9;UBERON:0004921!5.54e-11!129;UBERON:0004185!5.54e-11!129;UBERON:0001007!5.87e-10!155;UBERON:0001555!5.87e-10!155;UBERON:0007026!5.87e-10!155;UBERON:0004119!7.17e-09!169;UBERON:0000925!7.17e-09!169;UBERON:0006595!7.17e-09!169;UBERON:0004913!1.98e-08!1;UBERON:0003703!1.98e-08!1;UBERON:0001174!1.98e-08!1;UBERON:0004914!1.98e-08!1;UBERON:0008947!2.38e-08!38;UBERON:0003258!2.38e-08!38;UBERON:0000077!4.44e-08!130;UBERON:0002108!6.43e-08!14;UBERON:0001041!7.24e-07!98;UBERON:0000072!9.30e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.66e-15;2!UBERON:0002173;1.66e-15;2!UBERON:0002186;1.66e-15;2!UBERON:0000058;2.74e-12;10!UBERON:0004821;8.57e-11;3!UBERON:0007499;8.57e-11;3!UBERON:0003215;8.57e-11;3!UBERON:0010368;8.57e-11;3!UBERON:0009911;8.57e-11;3!UBERON:0002299;8.57e-11;3!UBERON:0006524;8.57e-11;3!UBERON:0008874;8.57e-11;3!UBERON:0002169;8.57e-11;3!UBERON:0004894;8.57e-11;3!UBERON:0009856;2.03e-08;4!UBERON:0001242;2.43e-08;4!UBERON:0002394;2.43e-08;4!UBERON:0001262;2.43e-08;4!UBERON:0004786;2.43e-08;4!UBERON:0004808;2.43e-08;4!UBERON:0001277;2.43e-08;4!UBERON:0003928;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4;UBERON:0000058,6.77e-07,19 | |||
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|short_description=p1@ENST00000559755 | |short_description=p1@ENST00000559755 | ||
}} | }} |
Latest revision as of 00:16, 25 July 2015
Short description: | p1@ENST00000559755 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000559755_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -182bp_to_ENST00000559755_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.99e-11 | 3 |
intestinal epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.78e-15 | 2 |
alveolar duct | 1.78e-15 | 2 |
bronchiole | 1.78e-15 | 2 |
pulmonary alveolus epithelium | 8.99e-11 | 3 |
alveolus | 8.99e-11 | 3 |
pulmonary lobule | 8.99e-11 | 3 |
lobule | 8.99e-11 | 3 |
alveolus of lung | 8.99e-11 | 3 |
alveolar system | 8.99e-11 | 3 |
pulmonary acinus | 8.99e-11 | 3 |
alveolar sac | 8.99e-11 | 3 |
alveolar wall | 8.99e-11 | 3 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |
duct | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.54e-15 | 2 |
lung adenocarcinoma | 1.78e-15 | 2 |
non-small cell lung carcinoma | 5.70e-07 | 5 |