FFCP PHASE1:Hg19::chr10:102543435..102543439,+: Difference between revisions
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|id=chr10:102543435..102543439,+
|short_description=p@chr10:102543435..102543439,+
|description=CAGE_peak_at_chr10:102543435..102543439,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:102543435..102543439,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_at_chr10:102543435..102543439,+ | |||
|id=chr10:102543435..102543439,+ | |||
|ontology_enrichment_celltype=CL:1000497!6.15e-07!18;CL:0002518!6.15e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;9.62e-09;17!CL:0002518;9.62e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.90e-09,17;CL:0002518,8.90e-09,17 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.96e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.75e-17!32;UBERON:0002113!4.00e-17!27;UBERON:0003918!4.00e-17!27;UBERON:0005095!4.00e-17!27;UBERON:0007687!4.00e-17!27;UBERON:0006947!1.18e-16!3;UBERON:0004054!1.18e-16!3;UBERON:0005904!1.31e-12!4;UBERON:0006554!9.04e-10!44;UBERON:0001008!1.64e-09!45;UBERON:0005172!4.74e-09!55;UBERON:0005173!4.74e-09!55;UBERON:0003103!3.39e-08!69;UBERON:0002417!5.95e-08!61;UBERON:0000916!5.95e-08!61;UBERON:0003135!1.30e-07!11;UBERON:0000080!5.69e-07!18;UBERON:0002120!5.69e-07!18;UBERON:0004875!5.69e-07!18;UBERON:0005721!5.69e-07!18;UBERON:0005754!5.69e-07!18;UBERON:0007297!5.69e-07!18;UBERON:0001301!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.99e-45;3!UBERON:0004054;4.99e-45;3!UBERON:0001000;2.18e-34;1!UBERON:0001301;2.18e-34;1!UBERON:0005352;2.18e-34;1!UBERON:0005904;4.28e-34;4!UBERON:0005795;5.97e-34;1!UBERON:0000058;2.49e-14;10!UBERON:0003135;4.00e-13;11!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5!UBERON:0004175;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.00e-45,3;UBERON:0004054,5.00e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0005904,4.28e-34,4;UBERON:0003135,4.00e-13,11;UBERON:0002113,3.13e-12,26;UBERON:0003918,3.13e-12,26;UBERON:0011143,3.13e-12,26;UBERON:0005095,3.13e-12,26;UBERON:0007687,3.13e-12,26;UBERON:0000489,2.22e-10,31;UBERON:0006555,2.66e-09,16;UBERON:0004819,2.66e-09,16;UBERON:0000058,5.16e-08,19;UBERON:0006554,4.40e-07,47;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0001008,6.00e-07,48 | |||
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|short_description=p@chr10:102543435..102543439,+ | |||
}} | }} |
Latest revision as of 09:35, 23 July 2015
Short description: | p@chr10:102543435..102543439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:102543435..102543439, + |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.90e-09 | 17 |
kidney epithelial cell | 8.90e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.00e-45 | 3 |
internal male genitalia | 5.00e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 2.58e-34 | 1 |
spermatic cord | 2.58e-34 | 1 |
duct of male reproductive system | 4.28e-34 | 4 |
male reproductive organ | 4.00e-13 | 11 |
kidney | 3.13e-12 | 26 |
kidney mesenchyme | 3.13e-12 | 26 |
upper urinary tract | 3.13e-12 | 26 |
kidney rudiment | 3.13e-12 | 26 |
kidney field | 3.13e-12 | 26 |
cavitated compound organ | 2.22e-10 | 31 |
excretory tube | 2.66e-09 | 16 |
kidney epithelium | 2.66e-09 | 16 |
duct | 5.16e-08 | 19 |
urinary system structure | 4.40e-07 | 47 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
renal system | 6.00e-07 | 48 |