FFCP PHASE1:Hg19::chr10:125853099..125853128,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:125853099..125853128,-
|short_description=p3@CHST15
|description=CAGE_peak_3_at_CHST15_5end
|association_with_transcript=0bp_to_ENST00000434607_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51363 | |EntrezGene=51363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18137 | |HGNC=18137 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LFX5 | |UniProt=Q7LFX5 | ||
|association_with_transcript=0bp_to_ENST00000434607_5end | |||
|cluster_id=chr10:125853099..125853128,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CHST15_5end | |||
|id=chr10:125853099..125853128,- | |||
|ontology_enrichment_celltype=CL:0002057!1.34e-26!42;CL:0000860!1.15e-23!45;CL:0000766!1.01e-18!76;CL:0002194!5.23e-18!63;CL:0000576!5.23e-18!63;CL:0000040!5.23e-18!63;CL:0000559!5.23e-18!63;CL:0002009!1.76e-17!65;CL:0000557!1.48e-13!71;CL:0000839!2.28e-13!70;CL:0000066!8.92e-12!254;CL:0002078!9.58e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-20;33!CL:0002057;2.26e-20;33!CL:0000473;7.65e-18;39!CL:0000234;7.65e-18;39!CL:0000576;9.04e-15;48!CL:0000766;1.47e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.06e-27,48;CL:0000234,1.06e-27,48;CL:0000860,5.36e-27,42;CL:0002057,5.36e-27,42;CL:0002194,3.39e-21,59;CL:0000576,3.39e-21,59;CL:0000040,3.39e-21,59;CL:0000559,3.39e-21,59;CL:0000766,4.91e-21,72;CL:0002009,2.05e-20,61;CL:0000557,2.10e-15,67;CL:0000839,3.33e-15,66;CL:0000066,1.36e-11,253;CL:0000223,6.36e-07,58;CL:0002078,6.77e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!7.80e-24!626;UBERON:0000467!1.23e-23!625;UBERON:0000468!1.67e-22!659;UBERON:0000922!2.76e-21!612;UBERON:0002050!6.65e-21!605;UBERON:0005423!6.65e-21!605;UBERON:0000923!1.64e-20!604;UBERON:0005291!1.64e-20!604;UBERON:0006598!1.64e-20!604;UBERON:0002532!1.64e-20!604;UBERON:0000062!2.40e-19!511;UBERON:0002193!1.35e-14!112;UBERON:0002405!1.75e-14!115;UBERON:0000926!5.74e-13!448;UBERON:0004120!5.74e-13!448;UBERON:0006603!5.74e-13!448;UBERON:0002390!8.27e-13!102;UBERON:0003061!8.27e-13!102;UBERON:0004765!4.27e-12!101;UBERON:0001434!4.27e-12!101;UBERON:0002371!6.26e-12!80;UBERON:0001474!3.27e-10!86;UBERON:0003081!3.43e-07!216;UBERON:0004119!4.61e-07!169;UBERON:0000925!4.61e-07!169;UBERON:0006595!4.61e-07!169;UBERON:0000466!9.55e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.47e-19,592;UBERON:0005423,1.32e-18,581;UBERON:0002050,5.08e-16,564;UBERON:0002193,6.78e-16,108;UBERON:0000923,1.25e-14,560;UBERON:0010316,1.25e-14,560;UBERON:0005291,1.25e-14,560;UBERON:0006598,1.25e-14,560;UBERON:0010317,1.25e-14,560;UBERON:0002532,1.25e-14,560;UBERON:0002390,4.79e-14,98;UBERON:0003061,4.79e-14,98;UBERON:0002405,1.12e-13,93;UBERON:0001434,2.51e-13,100;UBERON:0002371,2.84e-13,76;UBERON:0004765,7.92e-13,90;UBERON:0001474,2.26e-11,82;UBERON:0003081,3.79e-07,203;UBERON:0004119,6.98e-07,160;UBERON:0000925,6.98e-07,160;UBERON:0006595,6.98e-07,160 | |||
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| ||
|short_description=p3@CHST15 | |||
}} | }} |
Latest revision as of 21:49, 16 September 2015
Short description: | p3@CHST15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHST15_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000434607_5end |
EntrezGene: | CHST15 |
HGNC: | 18137 |
UniProt: | Q7LFX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.06e-27 | 48 |
phagocyte | 1.06e-27 | 48 |
classical monocyte | 5.36e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.36e-27 | 42 |
monopoietic cell | 3.39e-21 | 59 |
monocyte | 3.39e-21 | 59 |
monoblast | 3.39e-21 | 59 |
promonocyte | 3.39e-21 | 59 |
myeloid leukocyte | 4.91e-21 | 72 |
macrophage dendritic cell progenitor | 2.05e-20 | 61 |
granulocyte monocyte progenitor cell | 2.10e-15 | 67 |
myeloid lineage restricted progenitor cell | 3.33e-15 | 66 |
epithelial cell | 1.36e-11 | 253 |
endodermal cell | 6.36e-07 | 58 |
meso-epithelial cell | 6.77e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
embryo | 2.47e-19 | 592 |
developing anatomical structure | 1.32e-18 | 581 |
embryonic structure | 5.08e-16 | 564 |
hemolymphoid system | 6.78e-16 | 108 |
germ layer | 1.25e-14 | 560 |
germ layer / neural crest | 1.25e-14 | 560 |
embryonic tissue | 1.25e-14 | 560 |
presumptive structure | 1.25e-14 | 560 |
germ layer / neural crest derived structure | 1.25e-14 | 560 |
epiblast (generic) | 1.25e-14 | 560 |
hematopoietic system | 4.79e-14 | 98 |
blood island | 4.79e-14 | 98 |
immune system | 1.12e-13 | 93 |
skeletal system | 2.51e-13 | 100 |
bone marrow | 2.84e-13 | 76 |
skeletal element | 7.92e-13 | 90 |
bone element | 2.26e-11 | 82 |
lateral plate mesoderm | 3.79e-07 | 203 |
endoderm-derived structure | 6.98e-07 | 160 |
endoderm | 6.98e-07 | 160 |
presumptive endoderm | 6.98e-07 | 160 |