FFCP PHASE1:Hg19::chr11:2151947..2151958,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2151947..2151958,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_at_chr11:2151947..2151958,+ | |description=CAGE_peak_at_chr11:2151947..2151958,+ | ||
|id=chr11:2151947..2151958,+ | |id=chr11:2151947..2151958,+ | ||
|ontology_enrichment_celltype=CL:0000349!5.14e-11!3;CL:0002577!5.14e-11!3;CL:0002622!7.82e-10!3;CL:0000594!1.60e-09!3;CL:0002536!1.32e-07!2;CL:0000181!8.83e-07!12;CL:0000417!8.83e-07!12;CL:0000668!8.83e-07!12;CL:0000414!8.83e-07!12;CL:0000412!8.83e-07!12;CL:0000182!8.83e-07!12 | |ontology_enrichment_celltype=CL:0000349!5.14e-11!3;CL:0002577!5.14e-11!3;CL:0002622!7.82e-10!3;CL:0000594!1.60e-09!3;CL:0002536!1.32e-07!2;CL:0000181!8.83e-07!12;CL:0000417!8.83e-07!12;CL:0000668!8.83e-07!12;CL:0000414!8.83e-07!12;CL:0000412!8.83e-07!12;CL:0000182!8.83e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.23e-22;19!CL:0002577;2.38e-16;3!CL:0002537;1.86e-10;5!CL:0002536;4.42e-07;2!CL:0002575;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.85e-22,19;CL:0002577,1.49e-16,3;CL:0002537,2.04e-10,5;CL:0002536,5.28e-07,2;CL:0002575,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.32e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;4.53e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.16e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.74e-22!14;UBERON:0000158!3.74e-22!14;UBERON:0000478!1.10e-17!24;UBERON:0003124!1.43e-16!7;UBERON:0001987!1.51e-13!4;UBERON:0004340!1.51e-13!4;UBERON:0004119!1.26e-09!169;UBERON:0000925!1.26e-09!169;UBERON:0006595!1.26e-09!169;UBERON:0000305!4.35e-08!7;UBERON:0004923!4.87e-08!57;UBERON:0000162!1.81e-07!14;UBERON:0001353!1.81e-07!14;UBERON:0000163!1.81e-07!14;UBERON:0006866!1.81e-07!14;UBERON:0000164!1.81e-07!14;UBERON:0000931!1.81e-07!14;UBERON:0003929!2.65e-07!54;UBERON:0004871!4.53e-07!8;UBERON:0002367!5.36e-07!11;UBERON:0010147!5.36e-07!11;UBERON:0009846!5.36e-07!11;UBERON:0003353!5.36e-07!11;UBERON:0004902!5.36e-07!11;UBERON:0003820!5.36e-07!11;UBERON:0009847!5.36e-07!11;UBERON:0004122!6.28e-07!15;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | |ontology_enrichment_uberon=UBERON:0005631!3.74e-22!14;UBERON:0000158!3.74e-22!14;UBERON:0000478!1.10e-17!24;UBERON:0003124!1.43e-16!7;UBERON:0001987!1.51e-13!4;UBERON:0004340!1.51e-13!4;UBERON:0004119!1.26e-09!169;UBERON:0000925!1.26e-09!169;UBERON:0006595!1.26e-09!169;UBERON:0000305!4.35e-08!7;UBERON:0004923!4.87e-08!57;UBERON:0000162!1.81e-07!14;UBERON:0001353!1.81e-07!14;UBERON:0000163!1.81e-07!14;UBERON:0006866!1.81e-07!14;UBERON:0000164!1.81e-07!14;UBERON:0000931!1.81e-07!14;UBERON:0003929!2.65e-07!54;UBERON:0004871!4.53e-07!8;UBERON:0002367!5.36e-07!11;UBERON:0010147!5.36e-07!11;UBERON:0009846!5.36e-07!11;UBERON:0003353!5.36e-07!11;UBERON:0004902!5.36e-07!11;UBERON:0003820!5.36e-07!11;UBERON:0009847!5.36e-07!11;UBERON:0004122!6.28e-07!15;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.20e-23;24!UBERON:0005631;3.33e-19;10!UBERON:0000158;3.33e-19;10!UBERON:0000305;1.02e-15;7!UBERON:0001987;1.65e-12;4!UBERON:0000341;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.73e-30,14;UBERON:0000158,8.73e-30,14;UBERON:0000478,2.10e-23,24;UBERON:0003124,7.90e-16,7;UBERON:0000305,1.31e-15,7;UBERON:0004871,9.76e-14,8;UBERON:0001987,1.16e-12,4;UBERON:0004340,1.16e-12,4;UBERON:0004923,4.03e-08,66;UBERON:0000341,4.98e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,1.05506791291381,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,1.32945394550784,0.200506470303285,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15012491469462,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,10.6606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,1.59847687665704,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.551482276150566,0.906574442192831,0.606631894687664,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4383298820438,0,0,1.19370465096821,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,0,0.0620747142958579,0,0,0.808468755832877,0,5.81796611844978,0,0,0.332660356546013,0.0814032686109745,0,0,0.449126010532934,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,1.05506791291381,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,1.32945394550784,0.200506470303285,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15012491469462,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,10.6606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,1.59847687665704,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.551482276150566,0.906574442192831,0.606631894687664,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4383298820438,0,0,1.19370465096821,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,0,0.0620747142958579,0,0,0.808468755832877,0,5.81796611844978,0,0,0.332660356546013,0.0814032686109745,0,0,0.449126010532934,4.69281884806909,0,0,0,0,0 | ||
|short_description=p@chr11:2151947..2151958,+ | |short_description=p@chr11:2151947..2151958,+ | ||
}} | }} |
Latest revision as of 20:59, 23 July 2015
Short description: | p@chr11:2151947..2151958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2151947..2151958, + |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.85e-22 | 19 |
placental epithelial cell | 1.49e-16 | 3 |
amnion mesenchymal stem cell | 2.04e-10 | 5 |
amniotic epithelial cell | 5.28e-07 | 2 |
central nervous system pericyte | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.73e-30 | 14 |
membranous layer | 8.73e-30 | 14 |
extraembryonic structure | 2.10e-23 | 24 |
chorion | 7.90e-16 | 7 |
amnion | 1.31e-15 | 7 |
somatic layer of lateral plate mesoderm | 9.76e-14 | 8 |
placenta | 1.16e-12 | 4 |
allantois | 1.16e-12 | 4 |
organ component layer | 4.03e-08 | 66 |
throat | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.16e-08 | 14 |