FFCP PHASE1:Hg19::chr10:134826220..134826260,-: Difference between revisions
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|id=chr10:134826220..134826260,-
|short_description=p@chr10:134826220..134826260,-
|description=CAGE_peak_at_chr10:134826220..134826260,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:134826220..134826260,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:134826220..134826260,- | |||
|id=chr10:134826220..134826260,- | |||
|ontology_enrichment_celltype=CL:0002057!4.50e-123!42;CL:0000860!3.70e-114!45;CL:0000766!5.08e-84!76;CL:0002009!2.60e-78!65;CL:0002194!4.23e-77!63;CL:0000576!4.23e-77!63;CL:0000040!4.23e-77!63;CL:0000559!4.23e-77!63;CL:0000557!6.98e-71!71;CL:0000839!1.90e-68!70;CL:0000763!4.00e-56!112;CL:0000049!4.00e-56!112;CL:0000738!1.23e-55!140;CL:0002087!4.78e-49!119;CL:0000037!4.77e-43!172;CL:0000566!4.77e-43!172;CL:0002031!2.48e-42!124;CL:0000988!5.13e-40!182;CL:0002032!1.01e-39!165;CL:0000837!1.01e-39!165;CL:0002393!1.57e-20!9;CL:0002397!1.57e-20!9;CL:0000134!4.98e-16!358;CL:0002320!1.77e-15!365;CL:0000094!4.17e-14!8;CL:0000219!1.52e-13!390;CL:0000048!3.13e-11!430;CL:0000034!3.43e-11!444;CL:0000723!6.67e-11!436;CL:0000767!2.74e-10!3;CL:0000081!4.57e-10!11;CL:0000842!1.63e-09!3;CL:0000224!3.04e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-105;33!CL:0002057;4.35e-105;33!CL:0000473;5.63e-74;39!CL:0000234;5.63e-74;39!CL:0000576;1.74e-57;48!CL:0000766;6.35e-40;69!CL:0000094;1.57e-21;8!CL:0000763;2.26e-19;100!CL:0000081;1.61e-15;11!CL:0000767;3.74e-15;3!CL:0002087;7.85e-14;104!CL:0000738;5.20e-10;136!CL:0002393;7.97e-08;6!CL:0002397;7.97e-08;6!CL:0000775;1.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-110,42;CL:0002057,1.01e-110,42;CL:0000473,4.38e-96,48;CL:0000234,4.38e-96,48;CL:0000766,2.99e-88,72;CL:0002194,1.38e-75,59;CL:0000576,1.38e-75,59;CL:0000040,1.38e-75,59;CL:0000559,1.38e-75,59;CL:0002009,6.09e-73,61;CL:0000839,5.11e-67,66;CL:0000557,6.15e-66,67;CL:0000763,7.91e-57,108;CL:0000049,7.91e-57,108;CL:0000738,8.66e-44,136;CL:0002087,5.79e-36,115;CL:0002032,6.02e-36,161;CL:0000837,6.02e-36,161;CL:0002031,3.31e-34,120;CL:0000037,3.64e-34,168;CL:0000988,4.43e-32,177;CL:0000094,2.58e-21,8;CL:0000081,2.29e-15,11;CL:0000767,4.92e-15,3;CL:0000134,1.75e-12,354;CL:0002320,4.22e-12,361;CL:0000219,9.50e-11,386;CL:0000048,4.31e-09,427;CL:0000723,7.29e-09,433;CL:0000034,1.44e-08,441;CL:0000775,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.60e-80;42!CL:0000049;2.12e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.39e-71!102;UBERON:0003061!6.39e-71!102;UBERON:0002193!1.41e-63!112;UBERON:0002371!8.38e-62!80;UBERON:0001474!8.54e-57!86;UBERON:0004765!7.46e-47!101;UBERON:0001434!7.46e-47!101;UBERON:0002405!3.99e-44!115;UBERON:0003081!1.11e-28!216;UBERON:0002204!3.04e-24!167;UBERON:0002384!9.92e-15!375;UBERON:0000178!3.07e-09!15;UBERON:0000179!3.07e-09!15;UBERON:0000463!3.07e-09!15;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.78e-57,76;UBERON:0001474,7.48e-53,82;UBERON:0002390,7.56e-53,98;UBERON:0003061,7.56e-53,98;UBERON:0004765,1.23e-47,90;UBERON:0002193,2.24e-47,108;UBERON:0002405,6.59e-46,93;UBERON:0001434,2.83e-42,100;UBERON:0002204,8.46e-23,167;UBERON:0003081,4.12e-22,203;UBERON:0000926,8.55e-12,315;UBERON:0004120,8.55e-12,315;UBERON:0006603,8.55e-12,315;UBERON:0002384,1.41e-11,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,1.70297735647684,0,0,0,0,0,0,1.66198622559563,1.80490002723128,0.868043482863407,0,0,0,0.290796477559129,0.755751887377619,1.69808842831471,4.18372266430232,3.70051099219643,10.8397229813286,4.89077066947656,3.07392847834921,4.49316236788312,14.1345729102014,14.2006630388442,10.8341189275473,2.63539275359647,1.63743690034707,2.02251136000576,7.03992952453076,4.49300637906531,5.75403413219137,1.31940520074686,2.19410023383795,1.70489900213078,3.48251086354301,4.53908179752912,1.86846674698672,5.7787193009051,1.5644487552606,5.64690996233303,1.81619850790011,3.68277635987565,1.26584954976354,0.422510572623884,1.27562579979026,0.209658645508376,0.898629049171961,0.450530678524519,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,1.49801404789436,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0,1.94541993357815,2.16012574895246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:134826220..134826260,- | |||
}} | }} |
Latest revision as of 11:49, 23 July 2015
Short description: | p@chr10:134826220..134826260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134826220..134826260, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-110 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-110 | 42 |
defensive cell | 4.38e-96 | 48 |
phagocyte | 4.38e-96 | 48 |
myeloid leukocyte | 2.99e-88 | 72 |
monopoietic cell | 1.38e-75 | 59 |
monocyte | 1.38e-75 | 59 |
monoblast | 1.38e-75 | 59 |
promonocyte | 1.38e-75 | 59 |
macrophage dendritic cell progenitor | 6.09e-73 | 61 |
myeloid lineage restricted progenitor cell | 5.11e-67 | 66 |
granulocyte monocyte progenitor cell | 6.15e-66 | 67 |
myeloid cell | 7.91e-57 | 108 |
common myeloid progenitor | 7.91e-57 | 108 |
leukocyte | 8.66e-44 | 136 |
nongranular leukocyte | 5.79e-36 | 115 |
hematopoietic oligopotent progenitor cell | 6.02e-36 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-36 | 161 |
hematopoietic lineage restricted progenitor cell | 3.31e-34 | 120 |
hematopoietic stem cell | 3.64e-34 | 168 |
hematopoietic cell | 4.43e-32 | 177 |
granulocyte | 2.58e-21 | 8 |
blood cell | 2.29e-15 | 11 |
basophil | 4.92e-15 | 3 |
mesenchymal cell | 1.75e-12 | 354 |
connective tissue cell | 4.22e-12 | 361 |
motile cell | 9.50e-11 | 386 |
multi fate stem cell | 4.31e-09 | 427 |
somatic stem cell | 7.29e-09 | 433 |
stem cell | 1.44e-08 | 441 |
neutrophil | 1.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-57 | 76 |
bone element | 7.48e-53 | 82 |
hematopoietic system | 7.56e-53 | 98 |
blood island | 7.56e-53 | 98 |
skeletal element | 1.23e-47 | 90 |
hemolymphoid system | 2.24e-47 | 108 |
immune system | 6.59e-46 | 93 |
skeletal system | 2.83e-42 | 100 |
musculoskeletal system | 8.46e-23 | 167 |
lateral plate mesoderm | 4.12e-22 | 203 |
mesoderm | 8.55e-12 | 315 |
mesoderm-derived structure | 8.55e-12 | 315 |
presumptive mesoderm | 8.55e-12 | 315 |
connective tissue | 1.41e-11 | 371 |