FFCP PHASE1:Hg19::chr10:17271266..17271286,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:17271266..17271286,+
|short_description=p1@VIM
|description=CAGE_peak_1_at_VIM_5end
|association_with_transcript=0bp_to_ENST00000224237,ENST00000487938,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7431 | |EntrezGene=7431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12692 | |HGNC=12692 | ||
|UniProt=P08670, | |TSSclassifier=strong | ||
|UniProt=P08670,B0YJC4,F5H288 | |||
|association_with_transcript=0bp_to_ENST00000224237,ENST00000487938,ENST00000545533,uc001ipb.1,uc001ipc.1,uc009xjv.1_5end | |||
|cluster_id=chr10:17271266..17271286,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_1_at_VIM_5end | |||
|id=chr10:17271266..17271286,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-34!180;CL:0002371!3.22e-33!591;CL:0000144!9.91e-29!625;CL:0000048!2.05e-24!430;CL:0000723!9.32e-23!436;CL:0000034!3.28e-21!444;CL:0000057!3.46e-21!75;CL:0000222!7.12e-17!119;CL:0000548!3.83e-16!679;CL:0000004!3.83e-16!679;CL:0000255!3.83e-16!679;CL:0000012!4.44e-16!682;CL:0002320!1.66e-13!365;CL:0000219!2.04e-12!390;CL:0000680!3.75e-12!57;CL:0000056!3.75e-12!57;CL:0000355!3.75e-12!57;CL:0000134!4.64e-12!358;CL:0000183!5.74e-12!59;CL:0000187!9.02e-12!54;CL:0002057!4.53e-11!42;CL:0002620!2.18e-10!23;CL:0000557!5.14e-10!71;CL:0000192!7.89e-10!42;CL:0000514!7.89e-10!42;CL:0000003!9.20e-10!722;CL:0000393!1.53e-09!60;CL:0000211!1.53e-09!60;CL:0000860!1.56e-09!45;CL:0002009!4.78e-09!65;CL:0002194!6.54e-09!63;CL:0000576!6.54e-09!63;CL:0000040!6.54e-09!63;CL:0000559!6.54e-09!63;CL:0000359!7.52e-09!32;CL:0000839!8.05e-09!70;CL:0000766!1.15e-08!76;CL:0002139!2.52e-07!24;CL:0000115!4.23e-07!35;CL:0002078!8.92e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-11;33!CL:0002057;1.37e-11;33!CL:0002620;2.20e-10;23!CL:0000473;4.51e-10;39!CL:0000234;4.51e-10;39!CL:0000057;4.87e-09;73!CL:0000359;2.08e-08;32!CL:0000192;7.61e-08;43!CL:0002139;2.52e-07;24!CL:0000187;4.58e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.88e-25,427;CL:0000723,9.16e-24,433;CL:0000034,3.55e-22,441;CL:0000057,2.06e-21,76;CL:0000222,2.46e-17,121;CL:0002320,5.73e-14,361;CL:0000219,7.57e-13,386;CL:0000680,1.33e-12,58;CL:0000056,1.33e-12,58;CL:0000355,1.33e-12,58;CL:0000134,1.70e-12,354;CL:0000187,3.20e-12,55;CL:0000473,1.42e-11,48;CL:0000234,1.42e-11,48;CL:0000860,4.52e-11,42;CL:0002057,4.52e-11,42;CL:0000557,5.94e-11,67;CL:0002620,2.18e-10,23;CL:0000192,2.80e-10,43;CL:0000514,2.80e-10,43;CL:0002009,5.71e-10,61;CL:0000393,6.00e-10,61;CL:0000211,6.00e-10,61;CL:0002194,7.62e-10,59;CL:0000576,7.62e-10,59;CL:0000040,7.62e-10,59;CL:0000559,7.62e-10,59;CL:0000839,1.14e-09,66;CL:0000766,1.90e-09,72;CL:0000359,7.51e-09,32;CL:0002139,2.52e-07,24;CL:0000115,4.21e-07,36;CL:0002078,8.50e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-08;42!CL:0000514;7.61e-08;43!CL:0000355;2.32e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.81e-25!167;UBERON:0003081!7.00e-25!216;UBERON:0002049!7.57e-20!79;UBERON:0007798!7.57e-20!79;UBERON:0000055!1.98e-17!69;UBERON:0004535!2.03e-17!110;UBERON:0000914!4.05e-17!83;UBERON:0002329!4.05e-17!83;UBERON:0003077!4.05e-17!83;UBERON:0003059!4.05e-17!83;UBERON:0007282!4.05e-17!83;UBERON:0009618!4.05e-17!83;UBERON:0007285!4.05e-17!83;UBERON:0001009!2.35e-16!113;UBERON:0001981!3.12e-16!60;UBERON:0007500!3.12e-16!60;UBERON:0004537!3.12e-16!60;UBERON:0006965!3.12e-16!60;UBERON:0004872!8.36e-16!84;UBERON:0004290!1.32e-14!70;UBERON:0002384!9.87e-14!375;UBERON:0001637!1.17e-13!42;UBERON:0003509!1.17e-13!42;UBERON:0004572!1.17e-13!42;UBERON:0004765!2.27e-13!101;UBERON:0001434!2.27e-13!101;UBERON:0000926!2.36e-13!448;UBERON:0004120!2.36e-13!448;UBERON:0006603!2.36e-13!448;UBERON:0000486!8.60e-12!82;UBERON:0002371!3.14e-11!80;UBERON:0001134!3.81e-11!61;UBERON:0002036!3.81e-11!61;UBERON:0003082!3.81e-11!61;UBERON:0001474!5.35e-11!86;UBERON:0004573!1.23e-10!33;UBERON:0004571!1.23e-10!33;UBERON:0002385!1.96e-10!63;UBERON:0001015!1.96e-10!63;UBERON:0000383!1.96e-10!63;UBERON:0003914!6.71e-09!118;UBERON:0000947!1.21e-08!21;UBERON:0010191!1.21e-08!21;UBERON:0002193!1.35e-08!112;UBERON:0002199!1.56e-08!45;UBERON:0002416!1.56e-08!45;UBERON:0000468!1.01e-07!659;UBERON:0005256!1.14e-07!143;UBERON:0002390!1.47e-07!102;UBERON:0003061!1.47e-07!102;UBERON:0000480!1.77e-07!626;UBERON:0000467!1.94e-07!625;UBERON:0002097!6.58e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.66e-10;42!UBERON:0003509;3.66e-10;42!UBERON:0004572;3.66e-10;42!UBERON:0007500;9.45e-10;56!UBERON:0001981;9.45e-10;56!UBERON:0004537;9.45e-10;56!UBERON:0004573;9.93e-10;33!UBERON:0004571;9.93e-10;33!UBERON:0002049;1.02e-08;75!UBERON:0007798;1.02e-08;75!UBERON:0000055;1.11e-08;65!UBERON:0000947;1.21e-08;21!UBERON:0010191;1.21e-08;21!UBERON:0003914;1.27e-07;74!UBERON:0002384;6.35e-07;198 | |||
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| ||
|short_description=p1@VIM | |||
}} | }} |
Latest revision as of 10:25, 17 September 2015
Short description: | p1@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VIM_5end |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | 0bp_to_ENST00000224237, ENST00000487938, ENST00000545533, uc001ipb.1, uc001ipc.1, uc009xjv.1_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | P08670B0YJC4F5H288 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data