FFCP PHASE1:Hg19::chr11:63439407..63439428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25923 | |EntrezGene=25923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24526 | |HGNC=24526 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWF8 | |UniProt=F5GWF8 | ||
|association_with_transcript=-14bp_to_ENST00000540699_5end | |association_with_transcript=-14bp_to_ENST00000540699_5end | ||
|cluster_id=chr11:63439407..63439428,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_14_at_ATL3_5end | |description=CAGE_peak_14_at_ATL3_5end | ||
|id=chr11:63439407..63439428,- | |id=chr11:63439407..63439428,- | ||
|ontology_enrichment_celltype=CL:0002564!1.09e-10!3 | |ontology_enrichment_celltype=CL:0002564!1.09e-10!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.49e-41!11;UBERON:0006947!2.18e-38!3;UBERON:0004054!2.18e-38!3;UBERON:0000473!1.28e-32!8;UBERON:0000998!1.78e-29!1;UBERON:0006868!1.78e-29!1;UBERON:0001301!2.37e-29!1;UBERON:0005904!4.21e-29!4;UBERON:0003101!3.95e-21!22;UBERON:0000079!3.95e-21!22;UBERON:0000991!6.06e-13!21;UBERON:0009196!6.06e-13!21;UBERON:0009117!6.06e-13!21;UBERON:0005564!6.06e-13!21;UBERON:0004176!2.17e-12!22;UBERON:0002242!1.09e-10!3;UBERON:0003068!1.09e-10!3;UBERON:0002328!1.09e-10!3;UBERON:0004880!1.09e-10!3;UBERON:0003133!5.61e-10!48;UBERON:0005156!3.36e-08!59;UBERON:0000990!3.36e-08!59;UBERON:0003886!1.05e-07!63;UBERON:0000080!2.95e-07!18;UBERON:0002120!2.95e-07!18;UBERON:0004875!2.95e-07!18;UBERON:0005721!2.95e-07!18;UBERON:0005754!2.95e-07!18;UBERON:0007297!2.95e-07!18;UBERON:0002553!5.66e-07!70 | |ontology_enrichment_uberon=UBERON:0003135!1.49e-41!11;UBERON:0006947!2.18e-38!3;UBERON:0004054!2.18e-38!3;UBERON:0000473!1.28e-32!8;UBERON:0000998!1.78e-29!1;UBERON:0006868!1.78e-29!1;UBERON:0001301!2.37e-29!1;UBERON:0005904!4.21e-29!4;UBERON:0003101!3.95e-21!22;UBERON:0000079!3.95e-21!22;UBERON:0000991!6.06e-13!21;UBERON:0009196!6.06e-13!21;UBERON:0009117!6.06e-13!21;UBERON:0005564!6.06e-13!21;UBERON:0004176!2.17e-12!22;UBERON:0002242!1.09e-10!3;UBERON:0003068!1.09e-10!3;UBERON:0002328!1.09e-10!3;UBERON:0004880!1.09e-10!3;UBERON:0003133!5.61e-10!48;UBERON:0005156!3.36e-08!59;UBERON:0000990!3.36e-08!59;UBERON:0003886!1.05e-07!63;UBERON:0000080!2.95e-07!18;UBERON:0002120!2.95e-07!18;UBERON:0004875!2.95e-07!18;UBERON:0005721!2.95e-07!18;UBERON:0005754!2.95e-07!18;UBERON:0007297!2.95e-07!18;UBERON:0002553!5.66e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p14@ATL3 | |short_description=p14@ATL3 | ||
}} | }} |
Latest revision as of 00:02, 19 September 2015
Short description: | p14@ATL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ATL3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -14bp_to_ENST00000540699_5end |
EntrezGene: | ATL3 |
HGNC: | 24526 |
UniProt: | F5GWF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |