FFCP PHASE1:Hg19::chr12:104443742..104443753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83468 | |EntrezGene=83468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24890 | |HGNC=24890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000550816_5end | |association_with_transcript=45bp_to_ENST00000550816_5end | ||
|cluster_id=chr12:104443742..104443753,- | |||
|description=CAGE_peak_4_at_GLT8D2_5end | |description=CAGE_peak_4_at_GLT8D2_5end | ||
|id=chr12:104443742..104443753,- | |id=chr12:104443742..104443753,- | ||
|ontology_enrichment_celltype=CL:0000055!4.35e-24!180;CL:0000057!6.29e-22!75;CL:0000183!3.02e-10!59;CL:0000187!7.48e-10!54;CL:0000680!1.85e-09!57;CL:0000056!1.85e-09!57;CL:0000355!1.85e-09!57;CL:0000393!1.87e-08!60;CL:0000211!1.87e-08!60;CL:0002620!1.97e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.35e-24!180;CL:0000057!6.29e-22!75;CL:0000183!3.02e-10!59;CL:0000187!7.48e-10!54;CL:0000680!1.85e-09!57;CL:0000056!1.85e-09!57;CL:0000355!1.85e-09!57;CL:0000393!1.87e-08!60;CL:0000211!1.87e-08!60;CL:0002620!1.97e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002552;9.79e-12;5!CL:0002564;4.13e-11;3!CL:0000197;8.73e-10;6!CL:0000098;8.73e-10;6!CL:0002167;8.73e-10;6!CL:0002549;5.80e-08;2!CL:0002570;3.82e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,8.23e-12,5;CL:0000057,8.06e-11,76;CL:0002564,1.48e-10,3;CL:0000197,3.85e-10,6;CL:0000098,3.85e-10,6;CL:0002167,3.85e-10,6;CL:0002549,2.24e-08,2;CL:0002570,2.82e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.48e-13!83;UBERON:0002329!7.48e-13!83;UBERON:0003077!7.48e-13!83;UBERON:0003059!7.48e-13!83;UBERON:0007282!7.48e-13!83;UBERON:0009618!7.48e-13!83;UBERON:0007285!7.48e-13!83;UBERON:0002385!2.09e-09!63;UBERON:0001015!2.09e-09!63;UBERON:0000383!2.09e-09!63;UBERON:0001737!3.42e-09!9;UBERON:0004290!7.79e-09!70;UBERON:0001134!9.77e-09!61;UBERON:0002036!9.77e-09!61;UBERON:0003082!9.77e-09!61;UBERON:0003102!9.00e-08!95;UBERON:0000486!1.33e-07!82;UBERON:0005256!1.67e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.90e-13;9!UBERON:0001557;1.90e-13;9!UBERON:0011135;8.88e-12;5!UBERON:0002216;8.88e-12;5!UBERON:0011134;8.88e-12;5!UBERON:0002209;8.88e-12;5!UBERON:0002213;8.88e-12;5!UBERON:0007844;8.88e-12;5!UBERON:0011138;8.88e-12;5!UBERON:0001130;8.88e-12;5!UBERON:0001066;8.88e-12;5!UBERON:0001468;8.88e-12;5!UBERON:0002242;4.13e-11;3!UBERON:0000075;3.77e-10;16!UBERON:0005629;5.80e-08;2!UBERON:0005358;5.80e-08;2!UBERON:0001886;5.80e-08;2!UBERON:0004086;5.80e-08;2!UBERON:0005282;5.80e-08;2!UBERON:0005281;5.80e-08;2!UBERON:0004765;1.13e-07;26!UBERON:0004905;2.29e-07;8!UBERON:0000982;2.29e-07;8!UBERON:0004770;2.29e-07;8!UBERON:0001828;2.43e-07;8!UBERON:0005284;7.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.64e-13,9;UBERON:0011135,2.57e-11,5;UBERON:0002216,2.57e-11,5;UBERON:0011134,2.57e-11,5;UBERON:0002209,2.57e-11,5;UBERON:0002213,2.57e-11,5;UBERON:0005856,2.57e-11,5;UBERON:0005866,2.57e-11,5;UBERON:0005863,2.57e-11,5;UBERON:0007844,2.57e-11,5;UBERON:0011138,2.57e-11,5;UBERON:0001130,2.57e-11,5;UBERON:0001066,2.57e-11,5;UBERON:0001468,2.57e-11,5;UBERON:0002242,1.48e-10,3;UBERON:0003068,1.48e-10,3;UBERON:0002328,1.48e-10,3;UBERON:0004880,1.48e-10,3;UBERON:0000075,8.05e-10,16;UBERON:0005629,2.24e-08,2;UBERON:0005358,2.24e-08,2;UBERON:0001886,2.24e-08,2;UBERON:0004086,2.24e-08,2;UBERON:0005282,2.24e-08,2;UBERON:0005281,2.24e-08,2;UBERON:0011137,2.78e-08,14;UBERON:0001557,1.08e-07,19;UBERON:0001828,2.19e-07,8;UBERON:0005284,3.61e-07,5;UBERON:0004905,4.34e-07,8;UBERON:0000982,4.34e-07,8;UBERON:0004770,4.34e-07,8 | |||
|phase1_expression=0.54503513781167,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,3.34169152992126,0.994192127183747,1.34465029290355,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,1.00267582127178,0.869079113764942,1.5905718941022,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,2.29469296599051,0.709336764396714,0,0,0.74000264525148,0,0.269421344139376,0.163461903113459,1.51357427644931,1.72852777344,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0,1.63323337003915,0.737005903870608,1.13658359293342,2.37600571456411,1.48360157567134,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0.438977620880838,1.22595118319608,1.20190447125277,0,0.358779271377724,1.49490172172997,0.211931901159562,0.900273288253207,0.824420233907511,0.772921620136887,0.930584281657949,0.506328996723799,0.68205903612839,0,1.28869858099219,4.36444353410792,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,1.92972281457866,0,0,0.721879481669586,1.18306800039844,0.842923450390509,1.20505514941741,1.32352767278873,1.08939722046203,0.949082476444386,0.539325232640658,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.36669142910475,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,1.08506009479894,1.24782516918484,1.78428988797162,1.73472656537328,2.45996971484698,0.601892199455438,0,0,1.32845119707087,0.184369168541703,1.39013783148933,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0,0.640695746278505,1.53512174720011,0.160853921143607,0,0.154209693802656,1.24293207719189,1.14978018419333,0.519254429183621,0.348631135379878,0,0,0,0.803701137152247,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,1.82614416276065,1.30515024522806,0.426133137080504,1.06838442776085,0,0.192190067365106,0,0,0,1.5740617341532,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0.744316738719335,1.58189712359363,0,0,0.855877976067841,0.95460974377781,0,0.899362287916574,0.823611089208164,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.682499557039929,1.27264888758341,0,0.551365343546124,0,0.438450885253763,0,1.9676842561399,0.405820753925408,0,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0.714695326373367,0,0,1.62899880526114,0.864221491201268,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,1.49254802886874,1.63599316893057,1.66441758450784,0.378806010550178,1.0062716070103,2.66943366478961,0.915360273587694,0.302461847526478,0.777186002913902,0.147855149989634,0,0,0.621051827505038,0,0,0,0,0,0.813741466409323,0.909243296012797,0.107410557042488,0,0.398095888698616,0,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,3.87943538059752,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.994581110581374,0.300841313397029,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.2354792785515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| ||
|short_description=p4@GLT8D2 | |short_description=p4@GLT8D2 | ||
}} | }} |
Latest revision as of 23:25, 15 September 2015
Short description: | p4@GLT8D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GLT8D2_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000550816_5end |
EntrezGene: | GLT8D2 |
HGNC: | 24890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 8.23e-12 | 5 |
fibroblast | 8.06e-11 | 76 |
nucleus pulposus cell of intervertebral disc | 1.48e-10 | 3 |
receptor cell | 3.85e-10 | 6 |
sensory epithelial cell | 3.85e-10 | 6 |
olfactory epithelial cell | 3.85e-10 | 6 |
fibroblast of choroid plexus | 2.24e-08 | 2 |
mesenchymal stem cell of adipose | 2.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.64e-13 | 9 |
intervertebral cartilage | 2.57e-11 | 5 |
symphysis | 2.57e-11 | 5 |
nonsynovial joint | 2.57e-11 | 5 |
fibrous joint | 2.57e-11 | 5 |
cartilaginous joint | 2.57e-11 | 5 |
developing mesenchymal condensation | 2.57e-11 | 5 |
pre-cartilage condensation | 2.57e-11 | 5 |
cartilaginous condensation | 2.57e-11 | 5 |
cartilage element | 2.57e-11 | 5 |
post-cranial axial skeletal system | 2.57e-11 | 5 |
vertebral column | 2.57e-11 | 5 |
intervertebral disk | 2.57e-11 | 5 |
intervertebral joint | 2.57e-11 | 5 |
nucleus pulposus | 1.48e-10 | 3 |
axial mesoderm | 1.48e-10 | 3 |
notochord | 1.48e-10 | 3 |
chordamesoderm | 1.48e-10 | 3 |
subdivision of skeletal system | 8.05e-10 | 16 |
vascular plexus | 2.24e-08 | 2 |
ventricle of nervous system | 2.24e-08 | 2 |
choroid plexus | 2.24e-08 | 2 |
brain ventricle | 2.24e-08 | 2 |
ventricular system of brain | 2.24e-08 | 2 |
ventricular system of central nervous system | 2.24e-08 | 2 |
axial skeletal system | 2.78e-08 | 14 |
upper respiratory tract | 1.08e-07 | 19 |
gingiva | 2.19e-07 | 8 |
brain vasculature | 3.61e-07 | 5 |
articulation | 4.34e-07 | 8 |
skeletal joint | 4.34e-07 | 8 |
articular system | 4.34e-07 | 8 |