FFCP PHASE1:Mm9::chr9:8900459..8900489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18667 | |EntrezGene=18667 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=486 | |||
|TSSclassifier=NA | |||
|UniProt=A6H6A5,E9QPW3,E9PYW8 | |UniProt=A6H6A5,E9QPW3,E9PYW8 | ||
|association_with_transcript=0bp_to_ENSMUST00000070463,ENSMUST00000098986,ENSMUST00000165156_5end | |association_with_transcript=0bp_to_ENSMUST00000070463,ENSMUST00000098986,ENSMUST00000165156_5end | ||
|cluster_id=chr9:8900459..8900489,+ | |||
|description=CAGE_peak_1_at_Pgr_5end | |description=CAGE_peak_1_at_Pgr_5end | ||
|id=chr9:8900459..8900489,+ | |id=chr9:8900459..8900489,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.17e-13,3;CL:0000359,6.17e-13,3;CL:0002539,6.17e-13,3;CL:0000514,6.17e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!1.34e-10!9;UBERON:0003100!4.15e-10!11;UBERON:0003134!1.39e-09!8;UBERON:0002021!6.68e-07!10;UBERON:0000411!6.68e-07!10;UBERON:0001950!6.68e-07!10 | |ontology_enrichment_uberon=UBERON:0000474!1.34e-10!9;UBERON:0003100!4.15e-10!11;UBERON:0003134!1.39e-09!8;UBERON:0002021!6.68e-07!10;UBERON:0000411!6.68e-07!10;UBERON:0001950!6.68e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.30e-37,9;UBERON:0003100,2.16e-37,11;UBERON:0003134,1.53e-33,8;UBERON:0003975,5.60e-22,5;UBERON:0005795,6.92e-18,4;UBERON:0000995,6.92e-18,4;UBERON:0004175,9.90e-17,9;UBERON:0005156,8.30e-15,26;UBERON:0000990,8.30e-15,26;UBERON:0000992,3.87e-13,3;UBERON:0005631,3.87e-13,3;UBERON:0000478,3.87e-13,3;UBERON:0000158,3.87e-13,3;UBERON:0003133,5.10e-13,24;UBERON:0001135,6.17e-13,3;UBERON:0004237,6.17e-13,3;UBERON:0004695,6.17e-13,3;UBERON:0002111,6.17e-13,3;UBERON:0004178,6.17e-13,3;UBERON:0000947,7.94e-10,4;UBERON:0001637,7.94e-10,4;UBERON:0004573,7.94e-10,4;UBERON:0003509,7.94e-10,4;UBERON:0004571,7.94e-10,4;UBERON:0010191,7.94e-10,4;UBERON:0004572,7.94e-10,4;UBERON:0001987,1.38e-09,2;UBERON:0003124,1.38e-09,2;UBERON:0004340,1.38e-09,2;UBERON:0007023,4.28e-08,51;UBERON:0000055,5.95e-08,5;UBERON:0007500,5.95e-08,5;UBERON:0001981,5.95e-08,5;UBERON:0002049,5.95e-08,5;UBERON:0007798,5.95e-08,5;UBERON:0004537,5.95e-08,5;UBERON:0006965,5.95e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24919914465377,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.23029248682932,36.1587101758513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.307213066512487,0,0,0,0,2.8138130501584,0.30559649555362,0,0.711858403995515,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,1.52759045775474,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.81931657357869,1.72684981865896,1.01254341007058,0,0,0,2.20749397043786,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,20.8651925256155,2.84904965867608,3.25773918707152,45.8616941863649,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,47.4036850288695,10.1679394014634,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0.679913719975421,0.139951452323658,0.552799895217695,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,81.454194345813,93.2241767520379,65.3823556191151,0,1.6942555278512,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24919914465377,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.23029248682932,36.1587101758513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.307213066512487,0,0,0,0,2.8138130501584,0.30559649555362,0,0.711858403995515,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,1.52759045775474,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0.81931657357869,1.72684981865896,1.01254341007058,0,0,0,2.20749397043786,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,20.8651925256155,2.84904965867608,3.25773918707152,45.8616941863649,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,47.4036850288695,10.1679394014634,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0.679913719975421,0.139951452323658,0.552799895217695,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,81.454194345813,93.2241767520379,65.3823556191151,0,1.6942555278512,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.256100609619477,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p1@Pgr | |short_description=p1@Pgr | ||
}} | }} |
Latest revision as of 05:52, 27 September 2015
Short description: | p1@Pgr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pgr_5end |
Coexpression cluster: | MCL_coexpression_mm9:486 |
Association with transcript: | 0bp_to_ENSMUST00000070463, ENSMUST00000098986, ENSMUST00000165156_5end |
EntrezGene: | Pgr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.17e-13 | 3 |
vascular associated smooth muscle cell | 6.17e-13 | 3 |
aortic smooth muscle cell | 6.17e-13 | 3 |
smooth muscle myoblast | 6.17e-13 | 3 |