FFCP PHASE1:Hg19::chr10:75541796..75541836,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:75541796..75541836,+
|short_description=p1@CHCHD1
|description=CAGE_peak_1_at_CHCHD1_5end
|association_with_transcript=0bp_to_ENST00000372833,ENST00000372...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118487 | |EntrezGene=118487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23518 | |HGNC=23518 | ||
|UniProt=Q96BP2, | |TSSclassifier=strong | ||
|UniProt=Q96BP2,A6NJX6 | |||
|association_with_transcript=0bp_to_ENST00000372833,ENST00000372837,NM_203298,uc001jvb.2,uc001jvc.3_5end | |||
|cluster_id=chr10:75541796..75541836,+ | |||
|description=CAGE_peak_1_at_CHCHD1_5end | |||
|id=chr10:75541796..75541836,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-19!254;CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!4.20e-13!682;CL:0002321!7.39e-13!248;CL:0000220!1.63e-12!246;CL:0000222!1.22e-07!119;CL:1000449!4.81e-07!16;CL:1000497!6.16e-07!18;CL:0002518!6.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.63e-07;15!CL:1000497;2.32e-07;17!CL:0002518;2.32e-07;17!CL:0002681;3.96e-07;12!CL:0002584;3.96e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.52e-20,253;CL:0002321,4.01e-13,250;CL:0000222,7.21e-08,121;CL:1000449,1.60e-07,15;CL:1000497,2.33e-07,17;CL:0002518,2.33e-07,17;CL:0002681,4.06e-07,12;CL:0002584,4.06e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.61e-11!239;DOID:162!4.11e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.61e-11,239;DOID:162,4.11e-11,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.08e-09!238;UBERON:0009142!1.08e-09!238;UBERON:0005256!1.53e-08!143;UBERON:0002100!1.74e-08!216;UBERON:0000353!3.21e-07!17;UBERON:0004211!4.81e-07!16;UBERON:0001285!4.81e-07!16;UBERON:0007684!4.81e-07!16;UBERON:0003220!4.81e-07!16;UBERON:0004208!4.81e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.81e-08;15!UBERON:0006555;1.63e-07;15!UBERON:0004819;1.63e-07;15!UBERON:0001285;1.63e-07;15!UBERON:0007684;1.63e-07;15!UBERON:0001225;3.96e-07;12!UBERON:0008987;3.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.47e-08,199;UBERON:0000353,8.27e-08,15;UBERON:0004211,1.60e-07,15;UBERON:0009773,1.60e-07,15;UBERON:0001231,1.60e-07,15;UBERON:0001285,1.60e-07,15;UBERON:0007684,1.60e-07,15;UBERON:0004208,1.60e-07,15;UBERON:0003104,2.49e-07,160;UBERON:0009142,2.49e-07,160;UBERON:0001225,4.06e-07,12;UBERON:0008987,4.06e-07,12;UBERON:0006555,9.10e-07,16;UBERON:0004819,9.10e-07,16 | |||
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| ||
|short_description=p1@CHCHD1 | |||
}} | }} |
Latest revision as of 07:51, 19 September 2015
Short description: | p1@CHCHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHCHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372833, ENST00000372837, NM_203298, uc001jvb.2, uc001jvc.3_5end |
EntrezGene: | CHCHD1 |
HGNC: | 23518 |
UniProt: | Q96BP2A6NJX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.52e-20 | 253 |
embryonic cell | 4.01e-13 | 250 |
mesodermal cell | 7.21e-08 | 121 |
epithelial cell of nephron | 1.60e-07 | 15 |
kidney cell | 2.33e-07 | 17 |
kidney epithelial cell | 2.33e-07 | 17 |
kidney cortical cell | 4.06e-07 | 12 |
renal cortical epithelial cell | 4.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.47e-08 | 199 |
parenchyma | 8.27e-08 | 15 |
nephron epithelium | 1.60e-07 | 15 |
renal tubule | 1.60e-07 | 15 |
nephron tubule | 1.60e-07 | 15 |
nephron | 1.60e-07 | 15 |
uriniferous tubule | 1.60e-07 | 15 |
nephrogenic mesenchyme | 1.60e-07 | 15 |
mesenchyme | 2.49e-07 | 160 |
entire embryonic mesenchyme | 2.49e-07 | 160 |
cortex of kidney | 4.06e-07 | 12 |
renal parenchyma | 4.06e-07 | 12 |
excretory tube | 9.10e-07 | 16 |
kidney epithelium | 9.10e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.61e-11 | 239 |
cancer | 4.11e-11 | 235 |