FFCP PHASE1:Hg19::chr17:41323204..41323250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4077 | |EntrezGene=4077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6746 | |HGNC=6746 | ||
|TSSclassifier=strong | |||
|UniProt=Q14596,F8W799,B7Z4J4,B7Z5R6 | |UniProt=Q14596,F8W799,B7Z4J4,B7Z5R6 | ||
|association_with_transcript=0bp_to_ENST00000341165,ENST00000389311,ENST00000389312,ENST00000537493,ENST00000542611,NM_005899,uc010whu.1,uc010whv.1,uc010whw.1_5end | |association_with_transcript=0bp_to_ENST00000341165,ENST00000389311,ENST00000389312,ENST00000537493,ENST00000542611,NM_005899,uc010whu.1,uc010whv.1,uc010whw.1_5end | ||
|cluster_id=chr17:41323204..41323250,+ | |||
|description=CAGE_peak_1_at_NBR1_5end | |description=CAGE_peak_1_at_NBR1_5end | ||
|id=chr17:41323204..41323250,+ | |id=chr17:41323204..41323250,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-34!115;UBERON:0001049!4.23e-10!57;UBERON:0005068!4.23e-10!57;UBERON:0006241!4.23e-10!57;UBERON:0007135!4.23e-10!57;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0002616!1.53e-08!59;UBERON:0003080!2.53e-08!42;UBERON:0000153!2.74e-08!129;UBERON:0007811!2.74e-08!129;UBERON:0002780!6.81e-08!41;UBERON:0001890!6.81e-08!41;UBERON:0006240!6.81e-08!41;UBERON:0000033!1.00e-07!123;UBERON:0000468!3.30e-07!659;UBERON:0000062!4.59e-07!511;UBERON:0000475!5.35e-07!365;UBERON:0001017!6.83e-07!82;UBERON:0005743!9.76e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.70e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-34,114;UBERON:0001049,1.13e-09,56;UBERON:0005068,1.13e-09,56;UBERON:0006241,1.13e-09,56;UBERON:0007135,1.13e-09,56;UBERON:0000073,1.94e-08,53;UBERON:0002616,1.94e-08,53;UBERON:0000955,3.13e-08,68;UBERON:0006238,3.13e-08,68;UBERON:0002780,6.81e-08,41;UBERON:0001890,6.81e-08,41;UBERON:0003080,6.81e-08,41;UBERON:0006240,6.81e-08,41;UBERON:0010314,3.14e-07,132;UBERON:0011216,8.56e-07,223 | |||
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| ||
|short_description=p1@NBR1 | |short_description=p1@NBR1 | ||
}} | }} |
Latest revision as of 17:43, 24 September 2015
Short description: | p1@NBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NBR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341165, ENST00000389311, ENST00000389312, ENST00000537493, ENST00000542611, NM_005899, uc010whu.1, uc010whv.1, uc010whw.1_5end |
EntrezGene: | NBR1 |
HGNC: | 6746 |
UniProt: | Q14596F8W799B7Z4J4B7Z5R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-34 | 114 |
neural tube | 1.13e-09 | 56 |
neural rod | 1.13e-09 | 56 |
future spinal cord | 1.13e-09 | 56 |
neural keel | 1.13e-09 | 56 |
regional part of nervous system | 1.94e-08 | 53 |
regional part of brain | 1.94e-08 | 53 |
brain | 3.13e-08 | 68 |
future brain | 3.13e-08 | 68 |
regional part of forebrain | 6.81e-08 | 41 |
forebrain | 6.81e-08 | 41 |
anterior neural tube | 6.81e-08 | 41 |
future forebrain | 6.81e-08 | 41 |
structure with developmental contribution from neural crest | 3.14e-07 | 132 |
organ system subdivision | 8.56e-07 | 223 |