FFCP PHASE1:Mm9::chrX:83437105..83437121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11614 | |EntrezGene=11614 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=Q53ZY9,Q61066 | |UniProt=Q53ZY9,Q61066 | ||
|association_with_transcript=0bp_to_NM_007430,uc009tsd.1_5end | |association_with_transcript=0bp_to_NM_007430,uc009tsd.1_5end | ||
|cluster_id=chrX:83437105..83437121,+ | |||
|description=CAGE_peak_1_at_Nr0b1_5end | |description=CAGE_peak_1_at_Nr0b1_5end | ||
|id=chrX:83437105..83437121,+ | |id=chrX:83437105..83437121,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.60e-08,3;CL:0000351,6.60e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.45e-14!18;UBERON:0005564!1.45e-14!18;UBERON:0004176!1.19e-13!17;UBERON:0009196!1.19e-13!17;UBERON:0009117!1.19e-13!17;UBERON:0003133!1.25e-11!24;UBERON:0003135!1.77e-11!15;UBERON:0000473!4.93e-11!14;UBERON:0003101!1.84e-10!16;UBERON:0000079!1.84e-10!16;UBERON:0005156!3.09e-10!26;UBERON:0000990!3.09e-10!26;UBERON:0002346!1.26e-08!71;UBERON:0003075!1.26e-08!71;UBERON:0007284!1.26e-08!71;UBERON:0002369!2.36e-08!7;UBERON:0006858!2.36e-08!7;UBERON:0000007!1.82e-07!8;UBERON:0003296!1.82e-07!8;UBERON:0010133!1.82e-07!8 | |ontology_enrichment_uberon=UBERON:0000991!1.45e-14!18;UBERON:0005564!1.45e-14!18;UBERON:0004176!1.19e-13!17;UBERON:0009196!1.19e-13!17;UBERON:0009117!1.19e-13!17;UBERON:0003133!1.25e-11!24;UBERON:0003135!1.77e-11!15;UBERON:0000473!4.93e-11!14;UBERON:0003101!1.84e-10!16;UBERON:0000079!1.84e-10!16;UBERON:0005156!3.09e-10!26;UBERON:0000990!3.09e-10!26;UBERON:0002346!1.26e-08!71;UBERON:0003075!1.26e-08!71;UBERON:0007284!1.26e-08!71;UBERON:0002369!2.36e-08!7;UBERON:0006858!2.36e-08!7;UBERON:0000007!1.82e-07!8;UBERON:0003296!1.82e-07!8;UBERON:0010133!1.82e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.20e-30,18;UBERON:0005564,1.20e-30,18;UBERON:0004176,1.11e-28,17;UBERON:0009196,1.11e-28,17;UBERON:0009117,1.11e-28,17;UBERON:0000473,4.90e-23,14;UBERON:0003133,5.71e-22,24;UBERON:0003135,2.63e-21,15;UBERON:0005156,5.71e-20,26;UBERON:0000990,5.71e-20,26;UBERON:0003101,8.58e-20,16;UBERON:0000079,8.58e-20,16;UBERON:0002369,4.66e-16,7;UBERON:0006858,4.66e-16,7;UBERON:0002323,7.50e-13,37;UBERON:0004458,7.50e-13,37;UBERON:0003886,2.07e-12,38;UBERON:0002553,5.42e-12,39;UBERON:0003064,1.69e-09,14;UBERON:0000007,1.27e-08,8;UBERON:0003296,1.27e-08,8;UBERON:0010133,1.27e-08,8;UBERON:0000358,6.60e-08,3;UBERON:0000307,6.60e-08,3;UBERON:0007010,6.60e-08,3;UBERON:0000992,4.37e-07,3;UBERON:0001894,8.90e-07,10;UBERON:0006222,8.90e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3107575900923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0,1.45074916503213,1.00636407962651,0.52091337055676,0,0,0,0.883885756421003,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,3.11728492036132,10.9295755862666,13.0920155674221,15.681853813412,16.7302131013411,16.2272415847273,24.1279855352977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,1.52759045775474,0,0.252722758433675,0,0.650602214813519,5.28774840196988,3.60124259610698,0.753524089178575,1.2246569847239,0.2562274405697,0.562210347358373,0,0.431135985865684,0,0,0,0,0,0,5.57295947091781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,1.62565670302307,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,0,0.407302655690628,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,7.94864477166304,3.38324646967785,3.58351310577867,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,5.44703369206061,2.88097750450096,1.29358683782755,0.857348140126369,0.354680467284547,1.42695054081656,2.13913726782757,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,60.8788373778926,10.1671251309906,8.76929999422617,14.0004855607714,12.2701832303845,14.1923145412254,23.5888049677965,32.5510962109875,60.8184197669123,43.0019735070291,35.7157207759753,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,30.6340615656209,19.5576207408657,5.37230772365051,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3107575900923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0,1.45074916503213,1.00636407962651,0.52091337055676,0,0,0,0.883885756421003,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,3.11728492036132,10.9295755862666,13.0920155674221,15.681853813412,16.7302131013411,16.2272415847273,24.1279855352977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,1.52759045775474,0,0.252722758433675,0,0.650602214813519,5.28774840196988,3.60124259610698,0.753524089178575,1.2246569847239,0.2562274405697,0.562210347358373,0,0.431135985865684,0,0,0,0,0,0,5.57295947091781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,1.62565670302307,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,0,0.407302655690628,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,7.94864477166304,3.38324646967785,3.58351310577867,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,5.44703369206061,2.88097750450096,1.29358683782755,0.857348140126369,0.354680467284547,1.42695054081656,2.13913726782757,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,60.8788373778926,10.1671251309906,8.76929999422617,14.0004855607714,12.2701832303845,14.1923145412254,23.5888049677965,32.5510962109875,60.8184197669123,43.0019735070291,35.7157207759753,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,30.6340615656209,19.5576207408657,5.37230772365051,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Nr0b1 | |short_description=p1@Nr0b1 | ||
}} | }} |
Latest revision as of 00:43, 2 October 2015
Short description: | p1@Nr0b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nr0b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 0bp_to_NM_007430, uc009tsd.1_5end |
EntrezGene: | Nr0b1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.60e-08 | 3 |
trophoblast cell | 6.60e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gonad | 1.20e-30 | 18 |
gonad primordium | 1.20e-30 | 18 |
external genitalia | 1.11e-28 | 17 |
indifferent external genitalia | 1.11e-28 | 17 |
indifferent gonad | 1.11e-28 | 17 |
testis | 4.90e-23 | 14 |
reproductive organ | 5.71e-22 | 24 |
male reproductive organ | 2.63e-21 | 15 |
reproductive structure | 5.71e-20 | 26 |
reproductive system | 5.71e-20 | 26 |
male organism | 8.58e-20 | 16 |
male reproductive system | 8.58e-20 | 16 |
adrenal gland | 4.66e-16 | 7 |
adrenal/interrenal gland | 4.66e-16 | 7 |
body cavity | 7.50e-13 | 37 |
body cavity or lining | 7.50e-13 | 37 |
body cavity precursor | 2.07e-12 | 38 |
anatomical cavity | 5.42e-12 | 39 |
intermediate mesoderm | 1.69e-09 | 14 |
pituitary gland | 1.27e-08 | 8 |
gland of diencephalon | 1.27e-08 | 8 |
neuroendocrine gland | 1.27e-08 | 8 |
blastocyst | 6.60e-08 | 3 |
blastula | 6.60e-08 | 3 |
cleaving embryo | 6.60e-08 | 3 |
female gonad | 4.37e-07 | 3 |
diencephalon | 8.90e-07 | 10 |
future diencephalon | 8.90e-07 | 10 |