FFCP PHASE1:Hg19::chr17:57915281..57915332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK310806_5end | |association_with_transcript=0bp_to_AK310806_5end | ||
|cluster_id=chr17:57915281..57915332,+ | |||
|coexpression_cluster_id=C3661 | |||
|description=CAGE_peak_1_at_AK310806_5end | |description=CAGE_peak_1_at_AK310806_5end | ||
|id=chr17:57915281..57915332,+ | |id=chr17:57915281..57915332,+ | ||
|ontology_enrichment_celltype=CL:0000557!7.52e-15!71;CL:0002057!1.96e-14!42;CL:0000860!3.28e-14!45;CL:0002009!3.42e-14!65;CL:0002194!5.76e-14!63;CL:0000576!5.76e-14!63;CL:0000040!5.76e-14!63;CL:0000559!5.76e-14!63;CL:0000839!7.98e-14!70;CL:0000766!6.24e-12!76;CL:0000548!3.15e-10!679;CL:0000004!3.15e-10!679;CL:0000255!3.15e-10!679;CL:0000012!3.99e-10!682;CL:0000063!6.31e-08!578;CL:0002371!2.52e-07!591;CL:0000144!5.57e-07!625 | |ontology_enrichment_celltype=CL:0000557!7.52e-15!71;CL:0002057!1.96e-14!42;CL:0000860!3.28e-14!45;CL:0002009!3.42e-14!65;CL:0002194!5.76e-14!63;CL:0000576!5.76e-14!63;CL:0000040!5.76e-14!63;CL:0000559!5.76e-14!63;CL:0000839!7.98e-14!70;CL:0000766!6.24e-12!76;CL:0000548!3.15e-10!679;CL:0000004!3.15e-10!679;CL:0000255!3.15e-10!679;CL:0000012!3.99e-10!682;CL:0000063!6.31e-08!578;CL:0002371!2.52e-07!591;CL:0000144!5.57e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-16;33!CL:0002057;1.51e-16;33!CL:0000473;5.10e-15;39!CL:0000234;5.10e-15;39!CL:0000576;3.31e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.42e-16,48;CL:0000234,5.42e-16,48;CL:0000557,1.82e-14,67;CL:0000860,1.96e-14,42;CL:0002057,1.96e-14,42;CL:0002009,8.00e-14,61;CL:0002194,1.33e-13,59;CL:0000576,1.33e-13,59;CL:0000040,1.33e-13,59;CL:0000559,1.33e-13,59;CL:0000839,1.97e-13,66;CL:0000766,1.60e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.75e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.52e-15!80;UBERON:0001474!3.52e-13!86;UBERON:0002405!7.92e-13!115;UBERON:0004765!7.51e-12!101;UBERON:0001434!7.51e-12!101;UBERON:0002204!2.15e-11!167;UBERON:0002390!9.39e-11!102;UBERON:0003061!9.39e-11!102;UBERON:0002193!1.14e-10!112;UBERON:0000926!4.37e-10!448;UBERON:0004120!4.37e-10!448;UBERON:0006603!4.37e-10!448;UBERON:0003081!2.32e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-14,76;UBERON:0004765,9.53e-13,90;UBERON:0001474,9.54e-13,82;UBERON:0002405,1.05e-12,93;UBERON:0001434,2.74e-11,100;UBERON:0002204,9.85e-11,167;UBERON:0002390,2.59e-10,98;UBERON:0003061,2.59e-10,98;UBERON:0002193,3.15e-10,108;UBERON:0000926,6.70e-07,315;UBERON:0004120,6.70e-07,315;UBERON:0006603,6.70e-07,315;UBERON:0003081,9.69e-07,203 | |||
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| ||
|short_description=p1@AK310806 | |short_description=p1@AK310806 | ||
}} | }} |
Latest revision as of 19:29, 25 July 2015
Short description: | p1@AK310806 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK310806_5end |
Coexpression cluster: | C3661_CD14_Small_Fibroblast_Preadipocyte_serous_MCF7_Mast |
Association with transcript: | 0bp_to_AK310806_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.42e-16 | 48 |
phagocyte | 5.42e-16 | 48 |
granulocyte monocyte progenitor cell | 1.82e-14 | 67 |
classical monocyte | 1.96e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-14 | 42 |
macrophage dendritic cell progenitor | 8.00e-14 | 61 |
monopoietic cell | 1.33e-13 | 59 |
monocyte | 1.33e-13 | 59 |
monoblast | 1.33e-13 | 59 |
promonocyte | 1.33e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.97e-13 | 66 |
myeloid leukocyte | 1.60e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-14 | 76 |
skeletal element | 9.53e-13 | 90 |
bone element | 9.54e-13 | 82 |
immune system | 1.05e-12 | 93 |
skeletal system | 2.74e-11 | 100 |
musculoskeletal system | 9.85e-11 | 167 |
hematopoietic system | 2.59e-10 | 98 |
blood island | 2.59e-10 | 98 |
hemolymphoid system | 3.15e-10 | 108 |
mesoderm | 6.70e-07 | 315 |
mesoderm-derived structure | 6.70e-07 | 315 |
presumptive mesoderm | 6.70e-07 | 315 |
lateral plate mesoderm | 9.69e-07 | 203 |