FFCP PHASE1:Hg19::chr12:54379915..54379935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511575_5end | |association_with_transcript=0bp_to_ENST00000511575_5end | ||
|cluster_id=chr12:54379915..54379935,+ | |||
|description=CAGE_peak_8_at_HOXC10_5end | |description=CAGE_peak_8_at_HOXC10_5end | ||
|id=chr12:54379915..54379935,+ | |id=chr12:54379915..54379935,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;5.35e-10;2!CL:1000500;5.35e-10;2!CL:1000618;5.35e-10;2!CL:1001318;5.35e-10;2!CL:0002173;5.35e-10;2!CL:1000507;2.38e-07;10!CL:1000494;2.38e-07;10!CL:0002178;4.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.29e-10,2;CL:1000500,6.29e-10,2;CL:1000618,6.29e-10,2;CL:1001318,6.29e-10,2;CL:0002173,6.29e-10,2;CL:1000507,2.43e-07,10;CL:1000494,2.43e-07,10;CL:0002178,6.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.18e-09;29 | |||
|ontology_enrichment_disease=DOID:0050687!9.10e-12!143;DOID:305!4.08e-07!106 | |ontology_enrichment_disease=DOID:0050687!9.10e-12!143;DOID:305!4.08e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.83e-13!9;UBERON:0002113!1.58e-07!27;UBERON:0003918!1.58e-07!27;UBERON:0005095!1.58e-07!27;UBERON:0007687!1.58e-07!27 | |ontology_enrichment_uberon=UBERON:0001737!6.83e-13!9;UBERON:0002113!1.58e-07!27;UBERON:0003918!1.58e-07!27;UBERON:0005095!1.58e-07!27;UBERON:0007687!1.58e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.74e-31;9!UBERON:0001557;3.74e-31;9!UBERON:0003567;5.35e-10;2!UBERON:0003838;5.35e-10;2!UBERON:0003586;5.35e-10;2!UBERON:0005169;5.35e-10;2!UBERON:0002321;5.35e-10;2!UBERON:0005215;5.35e-10;2!UBERON:0002303;5.35e-10;2!UBERON:0002319;5.35e-10;2!UBERON:0002113;2.59e-08;24!UBERON:0011143;2.59e-08;24!UBERON:0004211;2.38e-07;10!UBERON:0009773;2.38e-07;10!UBERON:0001231;2.38e-07;10!UBERON:0004810;2.38e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.23e-31,9;UBERON:0001557,2.77e-14,19;UBERON:0003567,6.29e-10,2;UBERON:0003838,6.29e-10,2;UBERON:0003586,6.29e-10,2;UBERON:0005169,6.29e-10,2;UBERON:0002321,6.29e-10,2;UBERON:0005215,6.29e-10,2;UBERON:0002303,6.29e-10,2;UBERON:0002319,6.29e-10,2;UBERON:0002113,1.22e-07,26;UBERON:0003918,1.22e-07,26;UBERON:0011143,1.22e-07,26;UBERON:0005095,1.22e-07,26;UBERON:0007687,1.22e-07,26;UBERON:0004810,2.43e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0.795285947051099,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,1.07180705677318,0,0,0,0,0,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,2.01121560067735,2.36018566109342,1.44606617930089,1.98529150918309,2.17879444092406,2.13543557199987,1.61797569792197,2.94332197688019,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0,0,0.571652865261156,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,1.3321108950805,0,1.62786481617433,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,1.48418066444991,0.462629081407967,0.887808626565635,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0,0.451199612907412,0.308061348417659,2.35304930753057,0,0.211103257785751,0,0,0.431831832204279,0,1.08378575017541,2.50844886927427,1.27438136522519,0,0.895499018888713,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0.386682873168488,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.340906509664404,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0.563391205064483,1.00387946542836,0.392996164052485,1.07001315444375,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0.398495976502139,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0.787139999965761,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,1.63407695278485,0.41827123283581,0,0,0,0.0897576444097721,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0,0,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0,0,0,0.698906672968121,0,0.774050650312681,1.0232504392066,0.903270027585302,0,0.529536760149002,0,0.137041924646751,0.19871461170299,0,0.782205530939212,0,0,0,3.16998917739033,0.572682980829578,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,2.32991899054908,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,2.12775409707835,2.7276385830199,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.395223263795889,0,0,0,1.0027595760908,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0.947015026375446,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.825788063434183,0,0.115525666150338,0,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0.647782773655864,0,0,0,0.23248285073625,2.95559062914385,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0,1.07965256976767,0,0.647428837187895,1.23195368227496,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,2.12108892391463,0,0,0.4226557275834,0.679708458751268,0,0,0,0,0,0,0,0,0,2.20880187070458,0,0,0,1.11598505450025,0.462175628631418,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0.795285947051099,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,1.07180705677318,0,0,0,0,0,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,2.01121560067735,2.36018566109342,1.44606617930089,1.98529150918309,2.17879444092406,2.13543557199987,1.61797569792197,2.94332197688019,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0,0,0.571652865261156,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,1.3321108950805,0,1.62786481617433,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,1.48418066444991,0.462629081407967,0.887808626565635,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0,0.451199612907412,0.308061348417659,2.35304930753057,0,0.211103257785751,0,0,0.431831832204279,0,1.08378575017541,2.50844886927427,1.27438136522519,0,0.895499018888713,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0.386682873168488,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.340906509664404,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0.563391205064483,1.00387946542836,0.392996164052485,1.07001315444375,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0.398495976502139,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0.787139999965761,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,1.63407695278485,0.41827123283581,0,0,0,0.0897576444097721,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0,0,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0,0,0,0.698906672968121,0,0.774050650312681,1.0232504392066,0.903270027585302,0,0.529536760149002,0,0.137041924646751,0.19871461170299,0,0.782205530939212,0,0,0,3.16998917739033,0.572682980829578,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,2.32991899054908,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,2.12775409707835,2.7276385830199,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.395223263795889,0,0,0,1.0027595760908,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0.947015026375446,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.825788063434183,0,0.115525666150338,0,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0.647782773655864,0,0,0,0.23248285073625,2.95559062914385,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0,1.07965256976767,0,0.647428837187895,1.23195368227496,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,2.12108892391463,0,0,0.4226557275834,0.679708458751268,0,0,0,0,0,0,0,0,0,2.20880187070458,0,0,0,1.11598505450025,0.462175628631418,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | ||
|short_description=p8@HOXC10 | |short_description=p8@HOXC10 | ||
}} | }} |
Latest revision as of 04:36, 19 September 2015
Short description: | p8@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511575_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.29e-10 | 2 |
kidney interstitial cell | 6.29e-10 | 2 |
juxtaglomerular complex cell | 6.29e-10 | 2 |
renal interstitial pericyte | 6.29e-10 | 2 |
extraglomerular mesangial cell | 6.29e-10 | 2 |
kidney tubule cell | 2.43e-07 | 10 |
nephron tubule epithelial cell | 2.43e-07 | 10 |
epithelial cell of stomach | 6.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.23e-31 | 9 |
upper respiratory tract | 2.77e-14 | 19 |
abdomen connective tissue | 6.29e-10 | 2 |
abdominal segment connective tissue | 6.29e-10 | 2 |
trunk connective tissue | 6.29e-10 | 2 |
interstitial tissue | 6.29e-10 | 2 |
extraglomerular mesangium | 6.29e-10 | 2 |
kidney interstitium | 6.29e-10 | 2 |
juxtaglomerular apparatus | 6.29e-10 | 2 |
mesangium | 6.29e-10 | 2 |
kidney | 1.22e-07 | 26 |
kidney mesenchyme | 1.22e-07 | 26 |
upper urinary tract | 1.22e-07 | 26 |
kidney rudiment | 1.22e-07 | 26 |
kidney field | 1.22e-07 | 26 |
nephron tubule epithelium | 2.43e-07 | 10 |