FFCP PHASE1:Hg19::chr10:99185798..99185823,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:99185798..99185823,-
|short_description=p1@uc001kng.1
|description=CAGE_peak_1_at_uc001kng.1_5end
|association_with_transcript=0bp_to_uc001kng.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001kng.1_5end | |||
|cluster_id=chr10:99185798..99185823,- | |||
|description=CAGE_peak_1_at_uc001kng.1_5end | |||
|id=chr10:99185798..99185823,- | |||
|ontology_enrichment_celltype=CL:1000449!2.96e-07!16;CL:1000497!6.72e-07!18;CL:0002518!6.72e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.72e-08;15!CL:1000497;4.32e-08;17!CL:0002518;4.32e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,5.42e-09,15;CL:1000497,8.41e-09,17;CL:0002518,8.41e-09,17;CL:0002681,8.58e-07,12;CL:0002584,8.58e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.41e-08!312;UBERON:0000483!6.73e-08!309;UBERON:0004211!2.96e-07!16;UBERON:0001285!2.96e-07!16;UBERON:0007684!2.96e-07!16;UBERON:0003220!2.96e-07!16;UBERON:0004208!2.96e-07!16;UBERON:0004111!8.28e-07!241;UBERON:0001851!8.52e-07!16;UBERON:0000080!9.27e-07!18;UBERON:0002120!9.27e-07!18;UBERON:0004875!9.27e-07!18;UBERON:0005721!9.27e-07!18;UBERON:0005754!9.27e-07!18;UBERON:0007297!9.27e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.72e-08;15!UBERON:0004819;2.72e-08;15!UBERON:0001285;2.72e-08;15!UBERON:0007684;2.72e-08;15!UBERON:0001851;2.58e-07;15!UBERON:0006554;2.86e-07;30!UBERON:0001008;2.86e-07;30!UBERON:0000353;5.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,5.42e-09,15;UBERON:0009773,5.42e-09,15;UBERON:0001231,5.42e-09,15;UBERON:0001285,5.42e-09,15;UBERON:0007684,5.42e-09,15;UBERON:0004208,5.42e-09,15;UBERON:0006555,3.45e-08,16;UBERON:0004819,3.45e-08,16;UBERON:0001851,1.06e-07,15;UBERON:0000353,1.53e-07,15;UBERON:0001225,8.58e-07,12;UBERON:0008987,8.58e-07,12 | |||
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| ||
|short_description=p1@uc001kng.1 | |||
}} | }} |
Latest revision as of 17:14, 23 July 2015
Short description: | p1@uc001kng.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001kng.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001kng.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 5.42e-09 | 15 |
kidney cell | 8.41e-09 | 17 |
kidney epithelial cell | 8.41e-09 | 17 |
kidney cortical cell | 8.58e-07 | 12 |
renal cortical epithelial cell | 8.58e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 5.42e-09 | 15 |
renal tubule | 5.42e-09 | 15 |
nephron tubule | 5.42e-09 | 15 |
nephron | 5.42e-09 | 15 |
uriniferous tubule | 5.42e-09 | 15 |
nephrogenic mesenchyme | 5.42e-09 | 15 |
excretory tube | 3.45e-08 | 16 |
kidney epithelium | 3.45e-08 | 16 |
cortex | 1.06e-07 | 15 |
parenchyma | 1.53e-07 | 15 |
cortex of kidney | 8.58e-07 | 12 |
renal parenchyma | 8.58e-07 | 12 |