FFCP PHASE1:Hg19::chr11:1006616..1006623,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1006616..1006623,+
|short_description=p6@AP2A2
|description=CAGE_peak_6_at_AP2A2_5end
|association_with_transcript=72bp_to_ENST00000529427_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161 | |EntrezGene=161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=562 | |HGNC=562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENST00000529427_5end | |||
|cluster_id=chr11:1006616..1006623,+ | |||
|description=CAGE_peak_6_at_AP2A2_5end | |||
|id=chr11:1006616..1006623,+ | |||
|ontology_enrichment_celltype=CL:0000362!9.86e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.14e-13;2!CL:0002596;1.14e-13;2!CL:0002577;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.07e-13,2;CL:0002363,1.55e-13,2;CL:0000008,1.55e-13,2;CL:0002577,1.30e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.14e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.47e-09;3!DOID:127;1.47e-09;3!DOID:0060072;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.67e-09,3;DOID:127,1.67e-09,3;DOID:0060072,1.92e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.14e-13;2!UBERON:0001777;1.14e-13;2!UBERON:0005396;1.14e-13;2!UBERON:0001987;1.75e-07;4!UBERON:0003891;1.75e-07;4!UBERON:0000964;1.75e-07;4!UBERON:0010409;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,1.07e-13,2;UBERON:0003566,1.55e-13,2;UBERON:0001777,1.55e-13,2;UBERON:0001987,1.59e-07,4;UBERON:0004340,1.59e-07,4;UBERON:0003891,2.04e-07,4;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4 | |||
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| ||
|short_description=p6@AP2A2 | |||
}} | }} |
Latest revision as of 07:39, 20 September 2015
Short description: | p6@AP2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AP2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000529427_5end |
EntrezGene: | AP2A2 |
HGNC: | 562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.07e-13 | 2 |
keratocyte | 1.55e-13 | 2 |
migratory cranial neural crest cell | 1.55e-13 | 2 |
placental epithelial cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 1.07e-13 | 2 |
head connective tissue | 1.55e-13 | 2 |
substantia propria of cornea | 1.55e-13 | 2 |
placenta | 1.59e-07 | 4 |
allantois | 1.59e-07 | 4 |
stroma | 2.04e-07 | 4 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.67e-09 | 3 |
leiomyoma | 1.67e-09 | 3 |
benign neoplasm | 1.92e-07 | 4 |