FFCP PHASE1:Hg19::chr12:65228510..65228513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:65228510..65228513,+ | |||
|description=CAGE_peak_at_chr12:65228510..65228513,+ | |description=CAGE_peak_at_chr12:65228510..65228513,+ | ||
|id=chr12:65228510..65228513,+ | |id=chr12:65228510..65228513,+ | ||
|ontology_enrichment_celltype=CL:0000860!5.54e-16!45;CL:0002057!1.47e-14!42;CL:0000766!1.59e-10!76;CL:0002009!3.87e-10!65;CL:0000557!5.46e-10!71;CL:0002194!5.87e-10!63;CL:0000576!5.87e-10!63;CL:0000040!5.87e-10!63;CL:0000559!5.87e-10!63;CL:0000839!1.60e-09!70;CL:0000763!9.12e-08!112;CL:0000049!9.12e-08!112 | |ontology_enrichment_celltype=CL:0000860!5.54e-16!45;CL:0002057!1.47e-14!42;CL:0000766!1.59e-10!76;CL:0002009!3.87e-10!65;CL:0000557!5.46e-10!71;CL:0002194!5.87e-10!63;CL:0000576!5.87e-10!63;CL:0000040!5.87e-10!63;CL:0000559!5.87e-10!63;CL:0000839!1.60e-09!70;CL:0000763!9.12e-08!112;CL:0000049!9.12e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.74e-09;1!CL:0000164;5.74e-09;1!CL:0000502;5.74e-09;1!CL:0000172;5.74e-09;1!CL:0000173;5.74e-09;1!CL:0000860;1.12e-07;33!CL:0002057;1.12e-07;33!CL:0000333;2.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.58e-09,1;CL:0000164,3.58e-09,1;CL:0000502,3.58e-09,1;CL:0000172,3.58e-09,1;CL:0000173,3.58e-09,1;CL:0002351,3.58e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;5.74e-09;1!UBERON:0005754;5.74e-09;1!UBERON:0005425;5.74e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!7.25e-10!143;DOID:305!2.88e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:169;1.90e-12;6!DOID:4430;5.74e-09;1!DOID:171;1.17e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.40e-12,6;DOID:4430,3.58e-09,1;DOID:171,9.74e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-09!57;UBERON:0005068!3.51e-09!57;UBERON:0006241!3.51e-09!57;UBERON:0007135!3.51e-09!57;UBERON:0001474!4.28e-09!86;UBERON:0001950!6.06e-09!20;UBERON:0002619!7.71e-09!22;UBERON:0002780!1.33e-08!41;UBERON:0001890!1.33e-08!41;UBERON:0006240!1.33e-08!41;UBERON:0001893!2.40e-08!34;UBERON:0001869!2.69e-08!32;UBERON:0000073!2.70e-08!94;UBERON:0001016!2.70e-08!94;UBERON:0003080!3.02e-08!42;UBERON:0007023!5.20e-08!115;UBERON:0002371!8.96e-08!80;UBERON:0002791!1.10e-07!33;UBERON:0002616!1.14e-07!59;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0000956!2.70e-07!25;UBERON:0000203!2.70e-07!25;UBERON:0000955!7.03e-07!69;UBERON:0006238!7.03e-07!69;UBERON:0004765!8.92e-07!101;UBERON:0001434!8.92e-07!101 | |ontology_enrichment_uberon=UBERON:0001049!3.51e-09!57;UBERON:0005068!3.51e-09!57;UBERON:0006241!3.51e-09!57;UBERON:0007135!3.51e-09!57;UBERON:0001474!4.28e-09!86;UBERON:0001950!6.06e-09!20;UBERON:0002619!7.71e-09!22;UBERON:0002780!1.33e-08!41;UBERON:0001890!1.33e-08!41;UBERON:0006240!1.33e-08!41;UBERON:0001893!2.40e-08!34;UBERON:0001869!2.69e-08!32;UBERON:0000073!2.70e-08!94;UBERON:0001016!2.70e-08!94;UBERON:0003080!3.02e-08!42;UBERON:0007023!5.20e-08!115;UBERON:0002371!8.96e-08!80;UBERON:0002791!1.10e-07!33;UBERON:0002616!1.14e-07!59;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0000956!2.70e-07!25;UBERON:0000203!2.70e-07!25;UBERON:0000955!7.03e-07!69;UBERON:0006238!7.03e-07!69;UBERON:0004765!8.92e-07!101;UBERON:0001434!8.92e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.74e-09;1!UBERON:0000941;5.74e-09;1!UBERON:0002171;5.74e-09;1!UBERON:0001785;5.74e-09;1!UBERON:0002464;5.74e-09;1!UBERON:0004904;5.74e-09;1!UBERON:0006868;5.74e-09;1!UBERON:0001021;5.74e-09;1!UBERON:0006518;5.74e-09;1!UBERON:0008949;5.74e-09;1!UBERON:0000101;5.74e-09;1!UBERON:0002167;5.74e-09;1!UBERON:0000010;1.84e-08;8!UBERON:0000013;2.31e-07;5!UBERON:0002410;2.31e-07;5!UBERON:0002021;3.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.31e-09,1;UBERON:0006518,3.31e-09,1;UBERON:0008949,3.31e-09,1;UBERON:0000101,3.31e-09,1;UBERON:0002167,3.31e-09,1;UBERON:0000941,4.54e-09,1;UBERON:0001785,4.54e-09,1;UBERON:0002464,4.54e-09,1;UBERON:0004904,4.54e-09,1;UBERON:0001021,4.54e-09,1;UBERON:0003902,4.54e-09,1;UBERON:0005425,4.54e-09,1;UBERON:0000998,6.72e-09,1;UBERON:0006868,6.72e-09,1;UBERON:0000010,1.63e-08,8;UBERON:0000013,2.17e-07,5;UBERON:0002410,2.17e-07,5;UBERON:0002021,3.16e-07,5 | |||
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| ||
|short_description=p@chr12:65228510..65228513,+ | |short_description=p@chr12:65228510..65228513,+ | ||
}} | }} |
Latest revision as of 11:21, 24 July 2015
Short description: | p@chr12:65228510..65228513, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65228510..65228513, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.58e-09 | 1 |
enteroendocrine cell | 3.58e-09 | 1 |
type D enteroendocrine cell | 3.58e-09 | 1 |
somatostatin secreting cell | 3.58e-09 | 1 |
pancreatic D cell | 3.58e-09 | 1 |
progenitor cell of endocrine pancreas | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.31e-09 | 1 |
right lung lobe | 3.31e-09 | 1 |
lower lobe of lung | 3.31e-09 | 1 |
lobe of lung | 3.31e-09 | 1 |
right lung | 3.31e-09 | 1 |
cranial nerve II | 4.54e-09 | 1 |
cranial nerve | 4.54e-09 | 1 |
nerve trunk | 4.54e-09 | 1 |
nerve connecting eye with brain | 4.54e-09 | 1 |
nerve | 4.54e-09 | 1 |
retinal neural layer | 4.54e-09 | 1 |
presumptive neural retina | 4.54e-09 | 1 |
seminal vesicle | 6.72e-09 | 1 |
seminal fluid secreting gland | 6.72e-09 | 1 |
peripheral nervous system | 1.63e-08 | 8 |
sympathetic nervous system | 2.17e-07 | 5 |
autonomic nervous system | 2.17e-07 | 5 |
occipital lobe | 3.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.40e-12 | 6 |
somatostatinoma | 3.58e-09 | 1 |
neuroectodermal tumor | 9.74e-08 | 10 |