FFCP PHASE1:Hg19::chr19:14530143..14530177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10212 | |EntrezGene=10212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17821 | |HGNC=17821 | ||
|TSSclassifier=strong | |||
|UniProt=O00148 | |UniProt=O00148 | ||
|association_with_transcript=0bp_to_ENST00000242776,uc002myo.2,uc010dzl.2_5end | |association_with_transcript=0bp_to_ENST00000242776,uc002myo.2,uc010dzl.2_5end | ||
|cluster_id=chr19:14530143..14530177,- | |||
|description=CAGE_peak_1_at_DDX39A_5end | |description=CAGE_peak_1_at_DDX39A_5end | ||
|id=chr19:14530143..14530177,- | |id=chr19:14530143..14530177,- | ||
|ontology_enrichment_celltype=CL:0000003!6.19e-33!722;CL:0000012!6.64e-33!682;CL:0000548!6.80e-31!679;CL:0000004!6.80e-31!679;CL:0000255!6.80e-31!679;CL:0000988!3.12e-28!182;CL:0000037!1.07e-26!172;CL:0000566!1.07e-26!172;CL:0002032!8.86e-25!165;CL:0000837!8.86e-25!165;CL:0000144!1.10e-23!625;CL:0000063!4.40e-23!578;CL:0002371!2.89e-21!591;CL:0000219!4.08e-20!390;CL:0002031!1.54e-18!124;CL:0000738!3.00e-17!140;CL:0002087!5.61e-17!119;CL:0000034!6.32e-15!444;CL:0000134!2.33e-14!358;CL:0002320!2.62e-13!365;CL:0000763!4.28e-13!112;CL:0000049!4.28e-13!112;CL:0000723!8.47e-13!436;CL:0000048!4.96e-12!430;CL:0000542!7.70e-12!53;CL:0000051!7.70e-12!53;CL:0000838!1.82e-11!52;CL:0000860!5.51e-09!45;CL:0002057!8.75e-08!42;CL:0000839!1.05e-07!70;CL:0000945!1.08e-07!24;CL:0000826!1.08e-07!24;CL:0000557!1.13e-07!71 | |ontology_enrichment_celltype=CL:0000003!6.19e-33!722;CL:0000012!6.64e-33!682;CL:0000548!6.80e-31!679;CL:0000004!6.80e-31!679;CL:0000255!6.80e-31!679;CL:0000988!3.12e-28!182;CL:0000037!1.07e-26!172;CL:0000566!1.07e-26!172;CL:0002032!8.86e-25!165;CL:0000837!8.86e-25!165;CL:0000144!1.10e-23!625;CL:0000063!4.40e-23!578;CL:0002371!2.89e-21!591;CL:0000219!4.08e-20!390;CL:0002031!1.54e-18!124;CL:0000738!3.00e-17!140;CL:0002087!5.61e-17!119;CL:0000034!6.32e-15!444;CL:0000134!2.33e-14!358;CL:0002320!2.62e-13!365;CL:0000763!4.28e-13!112;CL:0000049!4.28e-13!112;CL:0000723!8.47e-13!436;CL:0000048!4.96e-12!430;CL:0000542!7.70e-12!53;CL:0000051!7.70e-12!53;CL:0000838!1.82e-11!52;CL:0000860!5.51e-09!45;CL:0002057!8.75e-08!42;CL:0000839!1.05e-07!70;CL:0000945!1.08e-07!24;CL:0000826!1.08e-07!24;CL:0000557!1.13e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000542;9.27e-08;53!CL:0000945;1.18e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-27,177;CL:0000037,4.84e-26,168;CL:0002032,3.86e-24,161;CL:0000837,3.86e-24,161;CL:0000219,8.73e-19,386;CL:0002031,5.78e-18,120;CL:0000738,1.14e-16,136;CL:0002087,2.06e-16,115;CL:0000034,1.33e-13,441;CL:0000134,2.97e-13,354;CL:0000763,1.48e-12,108;CL:0000049,1.48e-12,108;CL:0002320,3.01e-12,361;CL:0000542,7.70e-12,53;CL:0000051,7.70e-12,53;CL:0000723,1.37e-11,433;CL:0000838,1.82e-11,52;CL:0000048,7.26e-11,427;CL:0000860,8.75e-08,42;CL:0002057,8.75e-08,42;CL:0000945,1.08e-07,24;CL:0000826,1.08e-07,24;CL:0000839,3.20e-07,66;CL:0000557,3.45e-07,67;CL:0000473,8.95e-07,48;CL:0000234,8.95e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;9.27e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!6.13e-15!51;DOID:0060083!6.13e-15!51;DOID:1240!4.39e-13!39;DOID:8692!1.98e-09!31;DOID:162!9.02e-08!235;DOID:14566!5.40e-07!239;DOID:0050686!7.10e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.87e-10;39!DOID:2531;2.85e-09;51!DOID:0060083;2.85e-09;51!DOID:8692;3.87e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.13e-15,51;DOID:0060083,6.13e-15,51;DOID:1240,4.39e-13,39;DOID:8692,1.98e-09,31;DOID:162,9.02e-08,235;DOID:14566,5.40e-07,239;DOID:0050686,7.10e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.70e-12!375;UBERON:0002371!7.44e-08!80;UBERON:0001474!8.78e-08!86;UBERON:0002390!1.11e-07!102;UBERON:0003061!1.11e-07!102;UBERON:0002193!3.61e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.79e-11,371;UBERON:0002405,1.69e-07,93;UBERON:0002371,2.26e-07,76;UBERON:0001474,2.65e-07,82;UBERON:0002390,3.26e-07,98;UBERON:0003061,3.26e-07,98 | |||
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34,26.9277533534716 | ||
|short_description=p1@DDX39A | |short_description=p1@DDX39A | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p1@DDX39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX39A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242776, uc002myo.2, uc010dzl.2_5end |
EntrezGene: | DDX39A |
HGNC: | 17821 |
UniProt: | O00148 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.49e-27 | 177 |
hematopoietic stem cell | 4.84e-26 | 168 |
hematopoietic oligopotent progenitor cell | 3.86e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-24 | 161 |
motile cell | 8.73e-19 | 386 |
hematopoietic lineage restricted progenitor cell | 5.78e-18 | 120 |
leukocyte | 1.14e-16 | 136 |
nongranular leukocyte | 2.06e-16 | 115 |
stem cell | 1.33e-13 | 441 |
mesenchymal cell | 2.97e-13 | 354 |
myeloid cell | 1.48e-12 | 108 |
common myeloid progenitor | 1.48e-12 | 108 |
connective tissue cell | 3.01e-12 | 361 |
lymphocyte | 7.70e-12 | 53 |
common lymphoid progenitor | 7.70e-12 | 53 |
somatic stem cell | 1.37e-11 | 433 |
lymphoid lineage restricted progenitor cell | 1.82e-11 | 52 |
multi fate stem cell | 7.26e-11 | 427 |
classical monocyte | 8.75e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.75e-08 | 42 |
lymphocyte of B lineage | 1.08e-07 | 24 |
pro-B cell | 1.08e-07 | 24 |
myeloid lineage restricted progenitor cell | 3.20e-07 | 66 |
granulocyte monocyte progenitor cell | 3.45e-07 | 67 |
defensive cell | 8.95e-07 | 48 |
phagocyte | 8.95e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.79e-11 | 371 |
immune system | 1.69e-07 | 93 |
bone marrow | 2.26e-07 | 76 |
bone element | 2.65e-07 | 82 |
hematopoietic system | 3.26e-07 | 98 |
blood island | 3.26e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.13e-15 | 51 |
immune system cancer | 6.13e-15 | 51 |
leukemia | 4.39e-13 | 39 |
myeloid leukemia | 1.98e-09 | 31 |
cancer | 9.02e-08 | 235 |
disease of cellular proliferation | 5.40e-07 | 239 |
organ system cancer | 7.10e-07 | 137 |