FFCP PHASE1:Hg19::chr11:22647029..22647049,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:22647029..22647049,-
|short_description=p4@FANCF
|description=CAGE_peak_4_at_FANCF_5end
|association_with_transcript=306bp_to_AF181995_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2188 | |EntrezGene=2188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3587 | |HGNC=3587 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPI8 | |UniProt=Q9NPI8 | ||
|association_with_transcript=306bp_to_AF181995_5end | |||
|cluster_id=chr11:22647029..22647049,- | |||
|description=CAGE_peak_4_at_FANCF_5end | |||
|id=chr11:22647029..22647049,- | |||
|ontology_enrichment_celltype=CL:0000066!8.25e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.48e-10;2!CL:0002262;2.48e-10;2!CL:1000398;2.48e-10;2!CL:0002592;2.63e-07;3!CL:0000307;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.07e-10,2;CL:1000398,2.07e-10,2;CL:0002592,2.19e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!CL:0000377;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11!UBERON:0003498;2.63e-07;3!UBERON:0005985;2.63e-07;3!UBERON:0001621;2.63e-07;3!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.07e-10,2;UBERON:0003497,2.07e-10,2;UBERON:0003909,2.07e-10,2;UBERON:0003835,2.07e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11;UBERON:0001621,2.19e-07,3;UBERON:0001280,2.32e-07,3;UBERON:0004647,2.32e-07,3;UBERON:0005171,2.32e-07,3 | |||
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| ||
|short_description=p4@FANCF | |||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p4@FANCF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FANCF_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_AF181995_5end |
EntrezGene: | FANCF |
HGNC: | 3587 |
UniProt: | Q9NPI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.07e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.07e-10 | 2 |
smooth muscle cell of the coronary artery | 2.19e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.07e-10 | 2 |
abdomen blood vessel | 2.07e-10 | 2 |
sinusoid | 2.07e-10 | 2 |
abdominal segment blood vessel | 2.07e-10 | 2 |
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |
coronary artery | 2.19e-07 | 3 |
liver parenchyma | 2.32e-07 | 3 |
liver lobule | 2.32e-07 | 3 |
hepatic duct | 2.32e-07 | 3 |