FFCP PHASE1:Hg19::chr14:89029323..89029329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79882 | |EntrezGene=79882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20509 | |HGNC=20509 | ||
|TSSclassifier=strong | |||
|UniProt=G3V473 | |UniProt=G3V473 | ||
|association_with_transcript=0bp_to_ENST00000554602_5end | |association_with_transcript=0bp_to_ENST00000554602_5end | ||
|cluster_id=chr14:89029323..89029329,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_ZC3H14_5end | |description=CAGE_peak_4_at_ZC3H14_5end | ||
|id=chr14:89029323..89029329,+ | |id=chr14:89029323..89029329,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002321;4.41e-11;15!CL:0000333;9.47e-08;5!CL:0002322;9.47e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.42e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.23e-11;10!UBERON:0005564;1.23e-11;10!UBERON:0006215;1.11e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!5.27e-12!239;DOID:162!1.64e-11!235;DOID:0050687!5.03e-10!143;DOID:305!1.54e-08!106;DOID:3095!1.50e-07!22;DOID:2994!1.50e-07!22 | |ontology_enrichment_disease=DOID:14566!5.27e-12!239;DOID:162!1.64e-11!235;DOID:0050687!5.03e-10!143;DOID:305!1.54e-08!106;DOID:3095!1.50e-07!22;DOID:2994!1.50e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.18e-18;22!DOID:2994;7.18e-18;22!DOID:171;1.19e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.87e-17,22;DOID:2994,1.87e-17,22;DOID:171,3.28e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-10!94;UBERON:0001016!1.59e-10!94;UBERON:0005743!6.71e-09!86;UBERON:0002346!2.21e-08!90;UBERON:0001017!2.88e-08!82;UBERON:0000924!8.51e-08!173;UBERON:0006601!8.51e-08!173;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57;UBERON:0003075!4.02e-07!86;UBERON:0007284!4.02e-07!86;UBERON:0004121!8.48e-07!169 | |ontology_enrichment_uberon=UBERON:0000073!1.59e-10!94;UBERON:0001016!1.59e-10!94;UBERON:0005743!6.71e-09!86;UBERON:0002346!2.21e-08!90;UBERON:0001017!2.88e-08!82;UBERON:0000924!8.51e-08!173;UBERON:0006601!8.51e-08!173;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57;UBERON:0003075!4.02e-07!86;UBERON:0007284!4.02e-07!86;UBERON:0004121!8.48e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.75e-11;8!UBERON:0000922;1.77e-10;49!UBERON:0003135;7.12e-08;11!UBERON:0000013;9.47e-08;5!UBERON:0002410;9.47e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.88e-11,8;UBERON:0001016,1.24e-08,89;UBERON:0001049,5.73e-08,56;UBERON:0005068,5.73e-08,56;UBERON:0006241,5.73e-08,56;UBERON:0007135,5.73e-08,56;UBERON:0003135,5.91e-08,11;UBERON:0000013,7.70e-08,5;UBERON:0002410,7.70e-08,5;UBERON:0000073,1.65e-07,53;UBERON:0002616,1.65e-07,53;UBERON:0002346,2.09e-07,86 | |||
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| ||
|short_description=p4@ZC3H14 | |short_description=p4@ZC3H14 | ||
}} | }} |
Latest revision as of 10:43, 16 September 2015
Short description: | p4@ZC3H14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZC3H14_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000554602_5end |
EntrezGene: | ZC3H14 |
HGNC: | 20509 |
UniProt: | G3V473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.42e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.88e-11 | 8 |
nervous system | 1.24e-08 | 89 |
neural tube | 5.73e-08 | 56 |
neural rod | 5.73e-08 | 56 |
future spinal cord | 5.73e-08 | 56 |
neural keel | 5.73e-08 | 56 |
male reproductive organ | 5.91e-08 | 11 |
sympathetic nervous system | 7.70e-08 | 5 |
autonomic nervous system | 7.70e-08 | 5 |
regional part of nervous system | 1.65e-07 | 53 |
regional part of brain | 1.65e-07 | 53 |
neurectoderm | 2.09e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.87e-17 | 22 |
germ cell cancer | 1.87e-17 | 22 |
neuroectodermal tumor | 3.28e-10 | 10 |