FFCP PHASE1:Hg19::chr1:201390850..201390865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7135 | |EntrezGene=7135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11945 | |HGNC=11945 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001gwp.2_5end | |association_with_transcript=0bp_to_uc001gwp.2_5end | ||
|cluster_id=chr1:201390850..201390865,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_1_at_TNNI1_5end | |description=CAGE_peak_1_at_TNNI1_5end | ||
|id=chr1:201390850..201390865,- | |id=chr1:201390850..201390865,- | ||
|ontology_enrichment_celltype=CL:0000188!2.93e-11!9 | |ontology_enrichment_celltype=CL:0000188!2.93e-11!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;4.20e-18;9!CL:0000680;6.50e-13;7!CL:0000594;1.51e-08;3!CL:0000515;2.45e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.06e-18,9;CL:0000594,1.51e-08,3;CL:0000680,3.41e-07,58;CL:0000056,3.41e-07,58;CL:0000355,3.41e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.62e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-11!115;UBERON:0003103!5.32e-10!69;UBERON:0003104!3.17e-07!238;UBERON:0009142!3.17e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.24e-35;16!UBERON:0002036;6.24e-35;16!UBERON:0002385;7.22e-18;31!UBERON:0001015;7.22e-18;31!UBERON:0000383;7.22e-18;31!UBERON:0003978;3.18e-08;3!UBERON:0000946;3.18e-08;3!UBERON:0004151;4.44e-08;3!UBERON:0005090;7.99e-07;2!UBERON:0001630;7.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,5.50e-12,68;UBERON:0001134,2.04e-11,62;UBERON:0002036,2.04e-11,62;UBERON:0003082,2.04e-11,62;UBERON:0002385,6.72e-11,64;UBERON:0001015,6.72e-11,64;UBERON:0000383,6.72e-11,64;UBERON:0007023,5.02e-10,114;UBERON:0003104,6.19e-10,160;UBERON:0009142,6.19e-10,160;UBERON:0002329,2.52e-09,71;UBERON:0003059,2.52e-09,71;UBERON:0007282,2.52e-09,71;UBERON:0004290,2.52e-09,71;UBERON:0009618,2.52e-09,71;UBERON:0003077,3.97e-09,72;UBERON:0007285,3.97e-09,72;UBERON:0007503,5.00e-09,78;UBERON:0007524,6.20e-09,73;UBERON:0003978,3.14e-08,3;UBERON:0009751,3.14e-08,3;UBERON:0000946,3.14e-08,3;UBERON:0002523,3.14e-08,3;UBERON:0005983,3.14e-08,3;UBERON:0002165,3.14e-08,3;UBERON:0002062,3.14e-08,3;UBERON:0007280,3.14e-08,3;UBERON:0004151,4.45e-08,3;UBERON:0005256,2.39e-07,122;UBERON:0000486,2.81e-07,83;UBERON:0005090,8.00e-07,2;UBERON:0001630,8.00e-07,2 | |||
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| ||
|short_description=p1@TNNI1 | |short_description=p1@TNNI1 | ||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p1@TNNI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNNI1_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_uc001gwp.2_5end |
EntrezGene: | TNNI1 |
HGNC: | 11945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.06e-18 | 9 |
skeletal muscle satellite cell | 1.51e-08 | 3 |
muscle precursor cell | 3.41e-07 | 58 |
myoblast | 3.41e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
compound organ | 5.50e-12 | 68 |
skeletal muscle tissue | 2.04e-11 | 62 |
striated muscle tissue | 2.04e-11 | 62 |
myotome | 2.04e-11 | 62 |
muscle tissue | 6.72e-11 | 64 |
musculature | 6.72e-11 | 64 |
musculature of body | 6.72e-11 | 64 |
adult organism | 5.02e-10 | 114 |
mesenchyme | 6.19e-10 | 160 |
entire embryonic mesenchyme | 6.19e-10 | 160 |
somite | 2.52e-09 | 71 |
presomitic mesoderm | 2.52e-09 | 71 |
presumptive segmental plate | 2.52e-09 | 71 |
dermomyotome | 2.52e-09 | 71 |
trunk paraxial mesoderm | 2.52e-09 | 71 |
paraxial mesoderm | 3.97e-09 | 72 |
presumptive paraxial mesoderm | 3.97e-09 | 72 |
epithelial vesicle | 5.00e-09 | 78 |
dense mesenchyme tissue | 6.20e-09 | 73 |
valve | 3.14e-08 | 3 |
cardiac mesenchyme | 3.14e-08 | 3 |
cardial valve | 3.14e-08 | 3 |
tunica intima | 3.14e-08 | 3 |
heart layer | 3.14e-08 | 3 |
endocardium | 3.14e-08 | 3 |
endocardial cushion | 3.14e-08 | 3 |
presumptive endocardium | 3.14e-08 | 3 |
cardiac chamber | 4.45e-08 | 3 |
trunk mesenchyme | 2.39e-07 | 122 |
multilaminar epithelium | 2.81e-07 | 83 |
muscle structure | 8.00e-07 | 2 |
muscle organ | 8.00e-07 | 2 |