FFCP PHASE1:Hg19::chr11:61722845..61722856,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:61722845..61722856,+
|short_description=p13@BEST1
|description=CAGE_peak_13_at_BEST1_5end
|association_with_transcript=141bp_to_uc010rlv.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_uc010rlv.1_5end | |||
|cluster_id=chr11:61722845..61722856,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_BEST1_5end | |||
|id=chr11:61722845..61722856,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.57e-80!42;CL:0000860!6.30e-74!45;CL:0000766!6.25e-57!76;CL:0002194!1.91e-48!63;CL:0000576!1.91e-48!63;CL:0000040!1.91e-48!63;CL:0000559!1.91e-48!63;CL:0002009!1.27e-46!65;CL:0000839!1.64e-42!70;CL:0000557!9.29e-42!71;CL:0000763!3.48e-36!112;CL:0000049!3.48e-36!112;CL:0000738!9.14e-34!140;CL:0002087!4.88e-29!119;CL:0000037!2.55e-27!172;CL:0000566!2.55e-27!172;CL:0000988!5.06e-25!182;CL:0002032!6.15e-24!165;CL:0000837!6.15e-24!165;CL:0002031!3.93e-23!124;CL:0000094!1.26e-15!8;CL:0002393!1.78e-15!9;CL:0002397!1.78e-15!9;CL:0002320!1.12e-11!365;CL:0000134!1.51e-11!358;CL:0000081!5.29e-11!11;CL:0000219!2.36e-10!390;CL:0000775!4.40e-09!3;CL:0000048!4.64e-08!430;CL:0000723!9.68e-08!436;CL:0000842!2.28e-07!3;CL:0000875!2.33e-07!3;CL:0002396!2.33e-07!3;CL:0000034!2.49e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.35e-49;33!CL:0002057;6.35e-49;33!CL:0000473;7.63e-34;39!CL:0000234;7.63e-34;39!CL:0000576;2.62e-27;48!CL:0000094;5.32e-22;8!CL:0000775;8.21e-22;3!CL:0000766;1.18e-21;69!CL:0000081;5.94e-16;11!CL:0000771;2.90e-15;2!CL:0000763;7.66e-11;100!CL:0000738;7.64e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-52,42;CL:0002057,1.52e-52,42;CL:0000766,4.40e-48,72;CL:0000473,1.61e-45,48;CL:0000234,1.61e-45,48;CL:0002194,1.10e-35,59;CL:0000576,1.10e-35,59;CL:0000040,1.10e-35,59;CL:0000559,1.10e-35,59;CL:0002009,2.06e-34,61;CL:0000839,1.43e-31,66;CL:0000557,4.74e-31,67;CL:0000763,9.56e-31,108;CL:0000049,9.56e-31,108;CL:0000738,1.51e-23,136;CL:0000094,5.34e-22,8;CL:0000775,7.95e-22,3;CL:0002032,3.23e-19,161;CL:0000837,3.23e-19,161;CL:0000037,3.11e-18,168;CL:0000988,4.42e-17,177;CL:0002087,1.16e-16,115;CL:0000081,5.95e-16,11;CL:0002031,8.09e-16,120;CL:0000771,3.00e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-37;42!CL:0000049;2.14e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-49!102;UBERON:0003061!2.63e-49!102;UBERON:0002193!1.19e-43!112;UBERON:0002371!5.35e-40!80;UBERON:0001474!2.09e-36!86;UBERON:0004765!1.18e-32!101;UBERON:0001434!1.18e-32!101;UBERON:0002405!2.44e-24!115;UBERON:0002204!5.25e-18!167;UBERON:0003081!9.73e-18!216;UBERON:0000178!6.51e-15!15;UBERON:0000179!6.51e-15!15;UBERON:0000463!6.51e-15!15;UBERON:0002384!6.01e-11!375;UBERON:0000926!4.86e-08!448;UBERON:0004120!4.86e-08!448;UBERON:0006603!4.86e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.12e-16;15!UBERON:0000179;7.12e-16;15!UBERON:0000463;7.12e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-37,98;UBERON:0003061,3.16e-37,98;UBERON:0002193,2.13e-33,108;UBERON:0002371,5.47e-27,76;UBERON:0001474,9.06e-25,82;UBERON:0004765,2.90e-22,90;UBERON:0002405,1.96e-21,93;UBERON:0001434,1.09e-19,100;UBERON:0000178,6.60e-16,15;UBERON:0000179,6.60e-16,15;UBERON:0000463,6.60e-16,15;UBERON:0003081,1.07e-15,203;UBERON:0002204,2.38e-10,167;UBERON:0000926,1.86e-08,315;UBERON:0004120,1.86e-08,315;UBERON:0006603,1.86e-08,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0.293600439334847,0,1.60435557976113,0.434021741431704,0,0,0,1.16318591023652,1.13362783106643,0.727752183563449,1.62700325833979,1.23350366406548,0.619412741790207,1.1507695692886,0.768482119587302,3.31075121844019,1.03423704220986,1.93645405075148,4.06279459783025,3.38836211176688,1.09162460023138,1.12361742222542,2.14258724659632,0.641858054152187,0.639337125799041,0.659702600373432,0.997318288108159,0.852449501065388,0.290209238628584,0,1.24564449799115,1.7587406567972,0,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,1.04829322754188,0.898629049171961,1.05123824989054,1.44653028027372,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3560834872127,23.2668158488995,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,17.2271615507852,23.932916736322,17.8198670777495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,4.58782324285425,2.84823593587081,1.42939065274673,2.87953591160336,6.48473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0.293600439334847,0,1.60435557976113,0.434021741431704,0,0,0,1.16318591023652,1.13362783106643,0.727752183563449,1.62700325833979,1.23350366406548,0.619412741790207,1.1507695692886,0.768482119587302,3.31075121844019,1.03423704220986,1.93645405075148,4.06279459783025,3.38836211176688,1.09162460023138,1.12361742222542,2.14258724659632,0.641858054152187,0.639337125799041,0.659702600373432,0.997318288108159,0.852449501065388,0.290209238628584,0,1.24564449799115,1.7587406567972,0,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,1.04829322754188,0.898629049171961,1.05123824989054,1.44653028027372,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3560834872127,23.2668158488995,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,17.2271615507852,23.932916736322,17.8198670777495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,4.58782324285425,2.84823593587081,1.42939065274673,2.87953591160336,6.48473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@BEST1 | |||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p13@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_BEST1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 141bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.52e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-52 | 42 |
myeloid leukocyte | 4.40e-48 | 72 |
defensive cell | 1.61e-45 | 48 |
phagocyte | 1.61e-45 | 48 |
monopoietic cell | 1.10e-35 | 59 |
monocyte | 1.10e-35 | 59 |
monoblast | 1.10e-35 | 59 |
promonocyte | 1.10e-35 | 59 |
macrophage dendritic cell progenitor | 2.06e-34 | 61 |
myeloid lineage restricted progenitor cell | 1.43e-31 | 66 |
granulocyte monocyte progenitor cell | 4.74e-31 | 67 |
myeloid cell | 9.56e-31 | 108 |
common myeloid progenitor | 9.56e-31 | 108 |
leukocyte | 1.51e-23 | 136 |
granulocyte | 5.34e-22 | 8 |
neutrophil | 7.95e-22 | 3 |
hematopoietic oligopotent progenitor cell | 3.23e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-19 | 161 |
hematopoietic stem cell | 3.11e-18 | 168 |
hematopoietic cell | 4.42e-17 | 177 |
nongranular leukocyte | 1.16e-16 | 115 |
blood cell | 5.95e-16 | 11 |
hematopoietic lineage restricted progenitor cell | 8.09e-16 | 120 |
eosinophil | 3.00e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-37 | 98 |
blood island | 3.16e-37 | 98 |
hemolymphoid system | 2.13e-33 | 108 |
bone marrow | 5.47e-27 | 76 |
bone element | 9.06e-25 | 82 |
skeletal element | 2.90e-22 | 90 |
immune system | 1.96e-21 | 93 |
skeletal system | 1.09e-19 | 100 |
blood | 6.60e-16 | 15 |
haemolymphatic fluid | 6.60e-16 | 15 |
organism substance | 6.60e-16 | 15 |
lateral plate mesoderm | 1.07e-15 | 203 |
musculoskeletal system | 2.38e-10 | 167 |
mesoderm | 1.86e-08 | 315 |
mesoderm-derived structure | 1.86e-08 | 315 |
presumptive mesoderm | 1.86e-08 | 315 |