FFCP PHASE1:Hg19::chr1:44440683..44440690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=533 | |EntrezGene=533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=861 | |HGNC=861 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000496131_5end | |association_with_transcript=32bp_to_ENST00000496131_5end | ||
|cluster_id=chr1:44440683..44440690,+ | |||
|description=CAGE_peak_2_at_ATP6V0B_5end | |description=CAGE_peak_2_at_ATP6V0B_5end | ||
|id=chr1:44440683..44440690,+ | |id=chr1:44440683..44440690,+ | ||
|ontology_enrichment_celltype=CL:0002009!3.90e-30!65;CL:0002194!7.08e-29!63;CL:0000576!7.08e-29!63;CL:0000040!7.08e-29!63;CL:0000559!7.08e-29!63;CL:0000557!2.30e-27!71;CL:0000766!4.59e-27!76;CL:0000839!1.14e-23!70;CL:0002057!2.26e-23!42;CL:0000860!1.12e-22!45;CL:0000763!2.70e-18!112;CL:0000049!2.70e-18!112;CL:0000738!5.80e-08!140;CL:0000988!9.75e-08!182;CL:0002087!2.54e-07!119 | |ontology_enrichment_celltype=CL:0002009!3.90e-30!65;CL:0002194!7.08e-29!63;CL:0000576!7.08e-29!63;CL:0000040!7.08e-29!63;CL:0000559!7.08e-29!63;CL:0000557!2.30e-27!71;CL:0000766!4.59e-27!76;CL:0000839!1.14e-23!70;CL:0002057!2.26e-23!42;CL:0000860!1.12e-22!45;CL:0000763!2.70e-18!112;CL:0000049!2.70e-18!112;CL:0000738!5.80e-08!140;CL:0000988!9.75e-08!182;CL:0002087!2.54e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.22e-24;39!CL:0000234;2.22e-24;39!CL:0000860;3.49e-24;33!CL:0002057;3.49e-24;33!CL:0000576;4.67e-22;48!CL:0000766;3.54e-17;69!CL:0000763;1.41e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.25e-40,61;CL:0002194,9.11e-39,59;CL:0000576,9.11e-39,59;CL:0000040,9.11e-39,59;CL:0000559,9.11e-39,59;CL:0000766,1.20e-38,72;CL:0000473,3.48e-38,48;CL:0000234,3.48e-38,48;CL:0000557,1.55e-37,67;CL:0000839,1.46e-33,66;CL:0000860,5.58e-33,42;CL:0002057,5.58e-33,42;CL:0000763,1.12e-25,108;CL:0000049,1.12e-25,108;CL:0000738,1.71e-15,136;CL:0002087,1.24e-13,115;CL:0002031,3.45e-13,120;CL:0000988,1.15e-12,177;CL:0000037,1.37e-11,168;CL:0002032,1.96e-11,161;CL:0000837,1.96e-11,161;CL:0002393,1.27e-07,9;CL:0002397,1.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-23;42!CL:0000049;2.90e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.98e-23!80;UBERON:0001474!7.09e-22!86;UBERON:0002390!4.58e-20!102;UBERON:0003061!4.58e-20!102;UBERON:0004765!1.13e-19!101;UBERON:0001434!1.13e-19!101;UBERON:0002193!3.36e-17!112;UBERON:0002204!2.51e-14!167;UBERON:0002405!3.89e-13!115;UBERON:0003081!2.73e-12!216;UBERON:0000926!1.87e-07!448;UBERON:0004120!1.87e-07!448;UBERON:0006603!1.87e-07!448;UBERON:0000922!7.12e-07!612;UBERON:0000062!8.21e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-32,76;UBERON:0001474,1.59e-30,82;UBERON:0004765,5.37e-28,90;UBERON:0002390,8.50e-25,98;UBERON:0003061,8.50e-25,98;UBERON:0002405,4.37e-24,93;UBERON:0001434,1.39e-23,100;UBERON:0002193,4.74e-22,108;UBERON:0003081,5.76e-19,203;UBERON:0002204,3.79e-17,167;UBERON:0000926,1.75e-10,315;UBERON:0004120,1.75e-10,315;UBERON:0006603,1.75e-10,315 | |||
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| ||
|short_description=p2@ATP6V0B | |short_description=p2@ATP6V0B | ||
}} | }} |
Latest revision as of 05:37, 18 September 2015
Short description: | p2@ATP6V0B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP6V0B_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000496131_5end |
EntrezGene: | ATP6V0B |
HGNC: | 861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.25e-40 | 61 |
monopoietic cell | 9.11e-39 | 59 |
monocyte | 9.11e-39 | 59 |
monoblast | 9.11e-39 | 59 |
promonocyte | 9.11e-39 | 59 |
myeloid leukocyte | 1.20e-38 | 72 |
defensive cell | 3.48e-38 | 48 |
phagocyte | 3.48e-38 | 48 |
granulocyte monocyte progenitor cell | 1.55e-37 | 67 |
myeloid lineage restricted progenitor cell | 1.46e-33 | 66 |
classical monocyte | 5.58e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.58e-33 | 42 |
myeloid cell | 1.12e-25 | 108 |
common myeloid progenitor | 1.12e-25 | 108 |
leukocyte | 1.71e-15 | 136 |
nongranular leukocyte | 1.24e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.45e-13 | 120 |
hematopoietic cell | 1.15e-12 | 177 |
hematopoietic stem cell | 1.37e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.96e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-11 | 161 |
intermediate monocyte | 1.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-32 | 76 |
bone element | 1.59e-30 | 82 |
skeletal element | 5.37e-28 | 90 |
hematopoietic system | 8.50e-25 | 98 |
blood island | 8.50e-25 | 98 |
immune system | 4.37e-24 | 93 |
skeletal system | 1.39e-23 | 100 |
hemolymphoid system | 4.74e-22 | 108 |
lateral plate mesoderm | 5.76e-19 | 203 |
musculoskeletal system | 3.79e-17 | 167 |
mesoderm | 1.75e-10 | 315 |
mesoderm-derived structure | 1.75e-10 | 315 |
presumptive mesoderm | 1.75e-10 | 315 |