FFCP PHASE1:Hg19::chr11:64570565..64570568,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64570565..64570568,+
|short_description=p@chr11:64570565..64570568,+
|description=CAGE_peak_at_chr11:64570565..64570568,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:64570565..64570568,+ | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_at_chr11:64570565..64570568,+ | |||
|id=chr11:64570565..64570568,+ | |||
|ontology_enrichment_celltype=CL:0000839!8.35e-25!70;CL:0002194!4.09e-23!63;CL:0000576!4.09e-23!63;CL:0000040!4.09e-23!63;CL:0000559!4.09e-23!63;CL:0000766!3.66e-22!76;CL:0000557!6.45e-22!71;CL:0002009!1.32e-21!65;CL:0002057!2.49e-20!42;CL:0000860!3.74e-18!45;CL:0000763!1.35e-16!112;CL:0000049!1.35e-16!112;CL:0000048!2.98e-16!430;CL:0000723!1.10e-15!436;CL:0000034!1.49e-15!444;CL:0002371!1.97e-13!591;CL:0002320!1.18e-12!365;CL:0000144!1.22e-12!625;CL:0000548!7.32e-12!679;CL:0000004!7.32e-12!679;CL:0000255!7.32e-12!679;CL:0000012!1.83e-11!682;CL:0000134!2.30e-11!358;CL:0000003!7.55e-10!722;CL:0000219!3.35e-08!390;CL:0000063!4.64e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.50e-21;39!CL:0000234;3.50e-21;39!CL:0000860;1.97e-20;33!CL:0002057;1.97e-20;33!CL:0000576;2.53e-17;48!CL:0000766;4.60e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.24e-32,66;CL:0002194,1.76e-30,59;CL:0000576,1.76e-30,59;CL:0000040,1.76e-30,59;CL:0000559,1.76e-30,59;CL:0000766,5.48e-30,72;CL:0000557,3.86e-29,67;CL:0002009,1.63e-28,61;CL:0000473,6.13e-28,48;CL:0000234,6.13e-28,48;CL:0000860,2.90e-23,42;CL:0002057,2.90e-23,42;CL:0000763,8.83e-22,108;CL:0000049,8.83e-22,108;CL:0000048,7.32e-20,427;CL:0000723,3.33e-19,433;CL:0000034,9.35e-19,441;CL:0002320,2.72e-17,361;CL:0000134,1.24e-15,354;CL:0000219,5.10e-12,386;CL:0002031,2.55e-08,120;CL:0000738,2.47e-07,136;CL:0002032,3.90e-07,161;CL:0000837,3.90e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-17;42!CL:0000049;1.45e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.13e-22!115;UBERON:0002371!1.37e-21!80;UBERON:0002193!6.80e-19!112;UBERON:0001474!8.09e-19!86;UBERON:0002204!9.10e-19!167;UBERON:0002390!1.85e-17!102;UBERON:0003061!1.85e-17!102;UBERON:0004765!3.96e-16!101;UBERON:0001434!3.96e-16!101;UBERON:0003081!1.18e-13!216;UBERON:0002384!2.19e-12!375;UBERON:0000926!9.29e-12!448;UBERON:0004120!9.29e-12!448;UBERON:0006603!9.29e-12!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.81e-29,76;UBERON:0002405,1.66e-26,93;UBERON:0001474,3.25e-25,82;UBERON:0002193,3.49e-24,108;UBERON:0004765,4.38e-24,90;UBERON:0002390,1.16e-22,98;UBERON:0003061,1.16e-22,98;UBERON:0002204,1.11e-20,167;UBERON:0001434,9.51e-20,100;UBERON:0002384,5.42e-17,371;UBERON:0003081,2.13e-15,203;UBERON:0000926,2.33e-12,315;UBERON:0004120,2.33e-12,315;UBERON:0006603,2.33e-12,315 | |||
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| ||
|short_description=p@chr11:64570565..64570568,+ | |||
}} | }} |
Latest revision as of 00:20, 24 July 2015
Short description: | p@chr11:64570565..64570568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64570565..64570568, + |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.24e-32 | 66 |
monopoietic cell | 1.76e-30 | 59 |
monocyte | 1.76e-30 | 59 |
monoblast | 1.76e-30 | 59 |
promonocyte | 1.76e-30 | 59 |
myeloid leukocyte | 5.48e-30 | 72 |
granulocyte monocyte progenitor cell | 3.86e-29 | 67 |
macrophage dendritic cell progenitor | 1.63e-28 | 61 |
defensive cell | 6.13e-28 | 48 |
phagocyte | 6.13e-28 | 48 |
classical monocyte | 2.90e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-23 | 42 |
myeloid cell | 8.83e-22 | 108 |
common myeloid progenitor | 8.83e-22 | 108 |
multi fate stem cell | 7.32e-20 | 427 |
somatic stem cell | 3.33e-19 | 433 |
stem cell | 9.35e-19 | 441 |
connective tissue cell | 2.72e-17 | 361 |
mesenchymal cell | 1.24e-15 | 354 |
motile cell | 5.10e-12 | 386 |
hematopoietic lineage restricted progenitor cell | 2.55e-08 | 120 |
leukocyte | 2.47e-07 | 136 |
hematopoietic oligopotent progenitor cell | 3.90e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.90e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.81e-29 | 76 |
immune system | 1.66e-26 | 93 |
bone element | 3.25e-25 | 82 |
hemolymphoid system | 3.49e-24 | 108 |
skeletal element | 4.38e-24 | 90 |
hematopoietic system | 1.16e-22 | 98 |
blood island | 1.16e-22 | 98 |
musculoskeletal system | 1.11e-20 | 167 |
skeletal system | 9.51e-20 | 100 |
connective tissue | 5.42e-17 | 371 |
lateral plate mesoderm | 2.13e-15 | 203 |
mesoderm | 2.33e-12 | 315 |
mesoderm-derived structure | 2.33e-12 | 315 |
presumptive mesoderm | 2.33e-12 | 315 |