FFCP PHASE1:Hg19::chr11:69466430..69466446,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:69466430..69466446,+
|short_description=p@chr11:69466430..69466446,+
|description=CAGE_peak_at_chr11:69466430..69466446,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:69466430..69466446,+ | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_at_chr11:69466430..69466446,+ | |||
|id=chr11:69466430..69466446,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.63e-16!180;CL:0000359!2.70e-10!32;CL:0000220!2.92e-10!246;CL:0002321!6.50e-10!248;CL:0000192!2.01e-09!42;CL:0000514!2.01e-09!42;CL:0000680!5.69e-09!57;CL:0000056!5.69e-09!57;CL:0000355!5.69e-09!57;CL:0000057!9.80e-08!75;CL:0000187!1.28e-07!54;CL:0000183!1.30e-07!59;CL:0000548!7.04e-07!679;CL:0000004!7.04e-07!679;CL:0000255!7.04e-07!679;CL:0000393!8.62e-07!60;CL:0000211!8.62e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-11;32!CL:0002561;1.35e-09;2!CL:0000192;2.71e-08;43!CL:0002595;3.43e-08;5!CL:0002539;6.95e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.91e-11,32;CL:0000192,8.25e-10,43;CL:0000514,8.25e-10,43;CL:0002561,1.12e-09,2;CL:0000680,1.33e-09,58;CL:0000056,1.33e-09,58;CL:0000355,1.33e-09,58;CL:0002595,4.53e-08,5;CL:0000187,3.34e-07,55;CL:0002539,5.54e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.71e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.06e-14;3!DOID:127;4.06e-14;3!DOID:0060072;1.06e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.28e-14,3;DOID:127,4.28e-14,3;DOID:0060072,1.11e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001981!9.77e-10!60;UBERON:0007500!9.77e-10!60;UBERON:0004537!9.77e-10!60;UBERON:0006965!9.77e-10!60;UBERON:0001637!6.33e-09!42;UBERON:0003509!6.33e-09!42;UBERON:0004572!6.33e-09!42;UBERON:0000914!1.16e-08!83;UBERON:0002329!1.16e-08!83;UBERON:0003077!1.16e-08!83;UBERON:0003059!1.16e-08!83;UBERON:0007282!1.16e-08!83;UBERON:0009618!1.16e-08!83;UBERON:0007285!1.16e-08!83;UBERON:0000055!1.66e-08!69;UBERON:0005256!1.71e-08!143;UBERON:0003914!2.97e-08!118;UBERON:0002049!3.36e-08!79;UBERON:0007798!3.36e-08!79;UBERON:0002100!3.47e-08!216;UBERON:0004290!5.41e-08!70;UBERON:0002385!7.67e-08!63;UBERON:0001015!7.67e-08!63;UBERON:0000383!7.67e-08!63;UBERON:0000490!8.79e-08!138;UBERON:0000486!9.13e-08!82;UBERON:0001134!1.42e-07!61;UBERON:0002036!1.42e-07!61;UBERON:0003082!1.42e-07!61;UBERON:0000468!1.45e-07!659;UBERON:0004872!2.16e-07!84;UBERON:0003102!2.96e-07!95;UBERON:0004573!5.97e-07!33;UBERON:0004571!5.97e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.35e-09;2!UBERON:0005942;1.35e-09;2!UBERON:0005932;1.35e-09;2!UBERON:0003834;3.43e-08;5!UBERON:0001533;3.43e-08;5!UBERON:0004573;1.09e-07;33!UBERON:0004571;1.09e-07;33!UBERON:0004237;6.95e-07;10!UBERON:0004695;6.95e-07;10!UBERON:0002111;6.95e-07;10!UBERON:0004178;6.95e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.12e-09,2;UBERON:0005942,1.12e-09,2;UBERON:0005932,1.12e-09,2;UBERON:0007524,1.22e-09,73;UBERON:0004573,7.20e-09,33;UBERON:0004571,7.20e-09,33;UBERON:0001134,8.32e-09,62;UBERON:0002036,8.32e-09,62;UBERON:0003082,8.32e-09,62;UBERON:0002329,1.20e-08,71;UBERON:0003059,1.20e-08,71;UBERON:0007282,1.20e-08,71;UBERON:0004290,1.20e-08,71;UBERON:0009618,1.20e-08,71;UBERON:0003077,1.74e-08,72;UBERON:0007285,1.74e-08,72;UBERON:0002385,1.90e-08,64;UBERON:0001015,1.90e-08,64;UBERON:0000383,1.90e-08,64;UBERON:0001637,2.86e-08,42;UBERON:0003509,2.86e-08,42;UBERON:0004572,2.86e-08,42;UBERON:0003834,4.53e-08,5;UBERON:0001533,4.53e-08,5;UBERON:0007503,1.31e-07,78;UBERON:0004237,5.54e-07,10;UBERON:0004695,5.54e-07,10;UBERON:0002111,5.54e-07,10;UBERON:0004178,5.54e-07,10;UBERON:0000486,5.61e-07,83 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.281908808191942,3.00219895059391,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0.247532705920093,0.331397375727916,0,1.80808358407193,0.730310090387373,0.975865597581014,0,0,0,0,0.684372125364421,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0,0.189069634328136,0.443458794925128,0.175669571386252,0,0.728590576585084,0,0,0,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0.825354125820202,0,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.759783069987479,0.264818361626438,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,1.5608003841516,0,0.896692083310806,0,0.323745888736263,0.140450806702248,0.61246251376468,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0.250237039743928,0.554128230968366,0,0.919463387397059,0,0.226864366320042,0.717558542755448,0.85422955527427,0,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0.68205903612839,0.757301322732344,0.368199594569197,0.484938170456436,0.710019185033229,0.503760491138201,0,0,0.545492241181669,0,0,0,0.116193942869518,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,2.78620756819187,1.44375896333917,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.329250856225877,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,0,0.234817388471643,0.144366447761074,0,0.570762456703795,0,0.858486162094873,0,0.702012795417713,0.148631162288728,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0.380987365753014,0.763976851116555,0,0,1.23392991243988,3.00343057843917,0.285826432630578,0,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,1.41849132023278,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,2.31650090668127,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.315404830067869,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0,0,3.32870879020994,0,0.744323423456331,0.460385919864187,1.12264037773229,0.512556597022804,0,0.965123526861645,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0,0.604297247958111,1.60405176242628,0.276242966807689,0.459257792658427,0.546273504020151,0.262248829918848,0.451199612907412,0.308061348417659,0,0,0.422206515571503,0,0.340187410553031,0,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,2.78907329578371,1.5740617341532,0.6970372701606,0,1.06461206063404,0,0.37064843820784,0.715624433709956,0,0,0.38126038784765,0,0,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0.404364963146632,3.17020642346017,0.421258456238981,0,1.21856744815642,0,0.682499557039929,0.424216295861138,2.26016233240486,0.551365343546124,1.32687795048244,2.19225442626881,1.73632660280006,0,0.608731130888112,0.92947049429925,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,0.296964680832639,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0,1.16641845353302,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.41827123283581,0,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0.694238953340524,0.195984794828755,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0.274083849293502,0.19871461170299,0,0.391102765469606,0,0,0.19980960958213,0.288180834308212,0,0,0.14405479798815,0,0.235694034616795,0,0.313808538937,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0.720599767084807,0,0.157566364614447,0.164831716762333,0.0674035438541849,1.57483970423598,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0.6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| ||
|short_description=p@chr11:69466430..69466446,+ | |||
}} | }} |
Latest revision as of 01:58, 24 July 2015
Short description: | p@chr11:69466430..69466446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69466430..69466446, + |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.91e-11 | 32 |
smooth muscle cell | 8.25e-10 | 43 |
smooth muscle myoblast | 8.25e-10 | 43 |
outer root sheath cell | 1.12e-09 | 2 |
muscle precursor cell | 1.33e-09 | 58 |
myoblast | 1.33e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-09 | 58 |
smooth muscle cell of the subclavian artery | 4.53e-08 | 5 |
muscle cell | 3.34e-07 | 55 |
aortic smooth muscle cell | 5.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.12e-09 | 2 |
hair outer root sheath | 1.12e-09 | 2 |
bulb of hair follicle | 1.12e-09 | 2 |
dense mesenchyme tissue | 1.22e-09 | 73 |
systemic artery | 7.20e-09 | 33 |
systemic arterial system | 7.20e-09 | 33 |
skeletal muscle tissue | 8.32e-09 | 62 |
striated muscle tissue | 8.32e-09 | 62 |
myotome | 8.32e-09 | 62 |
somite | 1.20e-08 | 71 |
presomitic mesoderm | 1.20e-08 | 71 |
presumptive segmental plate | 1.20e-08 | 71 |
dermomyotome | 1.20e-08 | 71 |
trunk paraxial mesoderm | 1.20e-08 | 71 |
paraxial mesoderm | 1.74e-08 | 72 |
presumptive paraxial mesoderm | 1.74e-08 | 72 |
muscle tissue | 1.90e-08 | 64 |
musculature | 1.90e-08 | 64 |
musculature of body | 1.90e-08 | 64 |
artery | 2.86e-08 | 42 |
arterial blood vessel | 2.86e-08 | 42 |
arterial system | 2.86e-08 | 42 |
thoracic segment blood vessel | 4.53e-08 | 5 |
subclavian artery | 4.53e-08 | 5 |
epithelial vesicle | 1.31e-07 | 78 |
blood vessel smooth muscle | 5.54e-07 | 10 |
arterial system smooth muscle | 5.54e-07 | 10 |
artery smooth muscle tissue | 5.54e-07 | 10 |
aorta smooth muscle tissue | 5.54e-07 | 10 |
multilaminar epithelium | 5.61e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.28e-14 | 3 |
leiomyoma | 4.28e-14 | 3 |
benign neoplasm | 1.11e-10 | 4 |