FFCP PHASE1:Hg19::chr20:44640676..44640696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4318 | |EntrezGene=4318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7176 | |HGNC=7176 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3W7 | |UniProt=F5H3W7 | ||
|association_with_transcript=122bp_to_ENST00000545925_5end | |association_with_transcript=122bp_to_ENST00000545925_5end | ||
|cluster_id=chr20:44640676..44640696,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_6_at_MMP9_5end | |description=CAGE_peak_6_at_MMP9_5end | ||
|id=chr20:44640676..44640696,+ | |id=chr20:44640676..44640696,+ | ||
|ontology_enrichment_celltype=CL:0000990!6.55e-24!8;CL:0000451!2.78e-19!10;CL:0000453!6.84e-18!5;CL:0002322!5.48e-16!5;CL:0000840!1.45e-14!5;CL:0001029!1.45e-14!5;CL:0000235!1.33e-08!10;CL:0001014!2.46e-08!2;CL:0001016!2.46e-08!2;CL:0000148!1.12e-07!10;CL:0000541!1.12e-07!10;CL:0000763!5.01e-07!112;CL:0000049!5.01e-07!112;CL:0000557!5.03e-07!71;CL:0002009!6.93e-07!65 | |ontology_enrichment_celltype=CL:0000990!6.55e-24!8;CL:0000451!2.78e-19!10;CL:0000453!6.84e-18!5;CL:0002322!5.48e-16!5;CL:0000840!1.45e-14!5;CL:0001029!1.45e-14!5;CL:0000235!1.33e-08!10;CL:0001014!2.46e-08!2;CL:0001016!2.46e-08!2;CL:0000148!1.12e-07!10;CL:0000541!1.12e-07!10;CL:0000763!5.01e-07!112;CL:0000049!5.01e-07!112;CL:0000557!5.03e-07!71;CL:0002009!6.93e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.67e-64;5!CL:0000235;1.76e-52;6!CL:0001014;3.99e-41;2!CL:0001016;3.99e-41;2!CL:0000990;6.11e-36;8!CL:0000451;1.64e-29;10!CL:0000840;1.90e-14;5!CL:0000473;2.10e-08;39!CL:0000234;2.10e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.67e-64,5;CL:0000235,1.76e-52,6;CL:0001014,3.99e-41,2;CL:0001016,3.99e-41,2;CL:0000990,6.12e-36,8;CL:0000451,1.64e-29,10;CL:0000840,1.90e-14,5;CL:0001029,1.90e-14,5;CL:0002009,1.82e-11,61;CL:0000763,2.45e-11,108;CL:0000049,2.45e-11,108;CL:0000557,1.90e-10,67;CL:0000738,6.18e-09,136;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0000037,3.74e-07,168;CL:0000473,6.42e-07,48;CL:0000234,6.42e-07,48;CL:0000988,9.13e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002360!6.33e-07!2;UBERON:0000094!6.33e-07!2;UBERON:0007645!6.33e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.27e-09,76;UBERON:0001474,1.55e-08,82;UBERON:0004765,8.99e-08,90;UBERON:0002405,1.61e-07,93;UBERON:0002390,3.94e-07,98;UBERON:0003061,3.94e-07,98;UBERON:0001434,5.51e-07,100 | |||
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| ||
|short_description=p6@MMP9 | |short_description=p6@MMP9 | ||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p6@MMP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MMP9_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 122bp_to_ENST00000545925_5end |
EntrezGene: | MMP9 |
HGNC: | 7176 |
UniProt: | F5H3W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.67e-64 | 5 |
macrophage | 1.76e-52 | 6 |
CD1a-positive Langerhans cell | 3.99e-41 | 2 |
immature CD1a-positive Langerhans cell | 3.99e-41 | 2 |
conventional dendritic cell | 6.12e-36 | 8 |
dendritic cell | 1.64e-29 | 10 |
immature conventional dendritic cell | 1.90e-14 | 5 |
common dendritic progenitor | 1.90e-14 | 5 |
macrophage dendritic cell progenitor | 1.82e-11 | 61 |
myeloid cell | 2.45e-11 | 108 |
common myeloid progenitor | 2.45e-11 | 108 |
granulocyte monocyte progenitor cell | 1.90e-10 | 67 |
leukocyte | 6.18e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
hematopoietic stem cell | 3.74e-07 | 168 |
defensive cell | 6.42e-07 | 48 |
phagocyte | 6.42e-07 | 48 |
hematopoietic cell | 9.13e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.27e-09 | 76 |
bone element | 1.55e-08 | 82 |
skeletal element | 8.99e-08 | 90 |
immune system | 1.61e-07 | 93 |
hematopoietic system | 3.94e-07 | 98 |
blood island | 3.94e-07 | 98 |
skeletal system | 5.51e-07 | 100 |