FFCP PHASE1:Hg19::chr2:201719703..201719741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1195 | |EntrezGene=1195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2068 | |HGNC=2068 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000496205_5end | |association_with_transcript=-94bp_to_ENST00000496205_5end | ||
|cluster_id=chr2:201719703..201719741,- | |||
|coexpression_cluster_id=C584 | |||
|description=CAGE_peak_13_at_CLK1_5end | |description=CAGE_peak_13_at_CLK1_5end | ||
|id=chr2:201719703..201719741,- | |id=chr2:201719703..201719741,- | ||
|ontology_enrichment_celltype=CL:0002057!1.42e-22!42;CL:0000860!2.18e-21!45;CL:0002087!1.01e-19!119;CL:0000738!1.60e-18!140;CL:0002031!5.96e-18!124;CL:0000037!2.18e-15!172;CL:0000566!2.18e-15!172;CL:0002032!5.28e-14!165;CL:0000837!5.28e-14!165;CL:0000988!8.05e-14!182;CL:0002009!8.58e-13!65;CL:0002194!1.61e-12!63;CL:0000576!1.61e-12!63;CL:0000040!1.61e-12!63;CL:0000559!1.61e-12!63;CL:0000557!1.89e-12!71;CL:0000839!7.86e-12!70;CL:0000766!1.15e-11!76;CL:0000763!2.40e-08!112;CL:0000049!2.40e-08!112;CL:0000624!7.66e-08!6;CL:0002393!7.69e-08!9;CL:0002397!7.69e-08!9 | |ontology_enrichment_celltype=CL:0002057!1.42e-22!42;CL:0000860!2.18e-21!45;CL:0002087!1.01e-19!119;CL:0000738!1.60e-18!140;CL:0002031!5.96e-18!124;CL:0000037!2.18e-15!172;CL:0000566!2.18e-15!172;CL:0002032!5.28e-14!165;CL:0000837!5.28e-14!165;CL:0000988!8.05e-14!182;CL:0002009!8.58e-13!65;CL:0002194!1.61e-12!63;CL:0000576!1.61e-12!63;CL:0000040!1.61e-12!63;CL:0000559!1.61e-12!63;CL:0000557!1.89e-12!71;CL:0000839!7.86e-12!70;CL:0000766!1.15e-11!76;CL:0000763!2.40e-08!112;CL:0000049!2.40e-08!112;CL:0000624!7.66e-08!6;CL:0002393!7.69e-08!9;CL:0002397!7.69e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.28e-10;6!CL:0000623;5.73e-10;3!CL:0000791;4.50e-09;18!CL:0000789;4.50e-09;18!CL:0002419;4.50e-09;18!CL:0002581;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.48e-10,6;CL:0000623,5.01e-10,3;CL:0000825,5.01e-10,3;CL:0000791,4.88e-09,18;CL:0000789,4.88e-09,18;CL:0002420,4.88e-09,18;CL:0002419,4.88e-09,18;CL:0000790,4.88e-09,18;CL:0000838,5.69e-09,52;CL:0000542,8.94e-09,53;CL:0000051,8.94e-09,53;CL:0002581,4.40e-08,1;CL:0002087,3.37e-07,115;CL:0000738,7.99e-07,136;CL:0002031,8.36e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;4.50e-09;18!UBERON:0005425;6.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.66e-19!102;UBERON:0003061!6.66e-19!102;UBERON:0002193!3.01e-17!112;UBERON:0001474!1.27e-11!86;UBERON:0002371!4.02e-11!80;UBERON:0000178!4.63e-10!15;UBERON:0000179!4.63e-10!15;UBERON:0000463!4.63e-10!15;UBERON:0002405!7.06e-10!115;UBERON:0004765!1.40e-08!101;UBERON:0001434!1.40e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.01e-16;15!UBERON:0000179;3.01e-16;15!UBERON:0000463;3.01e-16;15!UBERON:0000941;6.40e-08;1!UBERON:0001785;6.40e-08;1!UBERON:0002464;6.40e-08;1!UBERON:0004904;6.40e-08;1!UBERON:0001021;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.15e-16,15;UBERON:0000179,3.15e-16,15;UBERON:0000463,3.15e-16,15;UBERON:0000941,4.71e-08,1;UBERON:0001785,4.71e-08,1;UBERON:0002464,4.71e-08,1;UBERON:0004904,4.71e-08,1;UBERON:0001021,4.71e-08,1;UBERON:0003902,4.71e-08,1;UBERON:0005425,4.71e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.232401601740905,0.142169232487422,0,1.10799081706375,0.401088894940283,1.08505435357926,0,0,0,0.290796477559129,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.28769239232215,0,0.47296445977717,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.22465726229299,0.450530678524519,0.32145117339416,0.855038231223746,0.79566670879636,0,0,0.546138611262131,0,0,0,0,1.32208974556972,0,2.27685187643779,0,0.764546456250458,0,1.12101712596307,0,1.37696839079683,2.75107533924415,1.02800749499755,0,0.32592226663359,0.473447805734733,3.89653456815823,0.111410456885174,0.883817722424512,0.221533894583621,1.62482318259009,0.25618263945135,0,0.328875809207352,0.276350017785848,0.579606171470105,0.14828656316206,1.60524496853828,1.04535523804977,0.226618685395132,0.766440987203842,0.68725489096526,0.759059076058509,0,0,0,0,0,0,0,0,0.403213486449465,1.87208137048455,1.01377082717959,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,2.37190332345469,1.41177339907723,0,0,0,0.167516265334349,0,0,5.9832291840805,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0.507447609232169,8.41100927856613,1.13929437434833,8.81457569193819,6.17043409629291,2.59389324477087,5.94034580961926,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0.365377795142688,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0.255788742607303,0,0,0,0,0.212574920101683,0,0,0,0.315446980005013,0,0.705351887381368,0,0,0,0,0,0.756215088665154,0,0,1.42769420259154,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0.219881033490858,0.150962843566674,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.6062295857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| ||
|short_description=p13@CLK1 | |short_description=p13@CLK1 | ||
}} | }} |
Latest revision as of 11:12, 19 September 2015
Short description: | p13@CLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CLK1_5end |
Coexpression cluster: | C584_Whole_blood_Neutrophils_Reticulocytes_CD19_Burkitt_CD4 |
Association with transcript: | -94bp_to_ENST00000496205_5end |
EntrezGene: | CLK1 |
HGNC: | 2068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.48e-10 | 6 |
natural killer cell | 5.01e-10 | 3 |
pro-NK cell | 5.01e-10 | 3 |
mature alpha-beta T cell | 4.88e-09 | 18 |
alpha-beta T cell | 4.88e-09 | 18 |
immature T cell | 4.88e-09 | 18 |
mature T cell | 4.88e-09 | 18 |
immature alpha-beta T cell | 4.88e-09 | 18 |
lymphoid lineage restricted progenitor cell | 5.69e-09 | 52 |
lymphocyte | 8.94e-09 | 53 |
common lymphoid progenitor | 8.94e-09 | 53 |
perirenal preadipocyte | 4.40e-08 | 1 |
nongranular leukocyte | 3.37e-07 | 115 |
leukocyte | 7.99e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 8.36e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.15e-16 | 15 |
haemolymphatic fluid | 3.15e-16 | 15 |
organism substance | 3.15e-16 | 15 |
cranial nerve II | 4.71e-08 | 1 |
cranial nerve | 4.71e-08 | 1 |
nerve trunk | 4.71e-08 | 1 |
nerve connecting eye with brain | 4.71e-08 | 1 |
nerve | 4.71e-08 | 1 |
retinal neural layer | 4.71e-08 | 1 |
presumptive neural retina | 4.71e-08 | 1 |