FFCP PHASE1:Hg19::chr19:18385246..18385267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80726 | |EntrezGene=80726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29350 | |HGNC=29350 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0B3,E9PDE0,E9PH54,Q2KHR5,A0JP07,B4DYH2 | |UniProt=Q9H0B3,E9PDE0,E9PH54,Q2KHR5,A0JP07,B4DYH2 | ||
|association_with_transcript=51bp_to_ENST00000359737,ENST00000392413,ENST00000427634,NM_001145304,NM_001145305,NM_025249,uc002nin.2,uc010ebn.2,uc010xqe.1_5end | |association_with_transcript=51bp_to_ENST00000359737,ENST00000392413,ENST00000427634,NM_001145304,NM_001145305,NM_025249,uc002nin.2,uc010ebn.2,uc010xqe.1_5end | ||
|cluster_id=chr19:18385246..18385267,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_KIAA1683_5end | |description=CAGE_peak_2_at_KIAA1683_5end | ||
|id=chr19:18385246..18385267,- | |id=chr19:18385246..18385267,- | ||
|ontology_enrichment_celltype=CL:0000181!3.52e-22!12;CL:0000417!3.52e-22!12;CL:0000668!3.52e-22!12;CL:0000414!3.52e-22!12;CL:0000412!3.52e-22!12;CL:0000182!3.52e-22!12;CL:0000223!3.44e-11!59 | |ontology_enrichment_celltype=CL:0000181!3.52e-22!12;CL:0000417!3.52e-22!12;CL:0000668!3.52e-22!12;CL:0000414!3.52e-22!12;CL:0000412!3.52e-22!12;CL:0000182!3.52e-22!12;CL:0000223!3.44e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0002363;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.07e-17,2;CL:0000008,1.07e-17,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.17e-17;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:3493!3.13e-12!2;DOID:7!7.99e-08!39;DOID:305!2.42e-07!106 | |ontology_enrichment_disease=DOID:3493!3.13e-12!2;DOID:7!7.99e-08!39;DOID:305!2.42e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.38e-18!19;UBERON:0006925!6.38e-18!19;UBERON:0008836!6.38e-18!19;UBERON:0005057!4.89e-16!26;UBERON:0008835!2.59e-15!22;UBERON:0003894!2.59e-15!22;UBERON:0009854!1.35e-14!23;UBERON:0007499!2.49e-13!25;UBERON:0009497!2.49e-13!25;UBERON:0000015!2.49e-13!25;UBERON:0002423!2.49e-13!25;UBERON:0006235!2.49e-13!25;UBERON:0004161!2.49e-13!25;UBERON:0002365!3.35e-13!31;UBERON:0002330!3.35e-13!31;UBERON:0009856!9.01e-13!26;UBERON:0005172!2.40e-10!55;UBERON:0005173!2.40e-10!55;UBERON:0002368!3.54e-09!35;UBERON:0002417!3.98e-09!61;UBERON:0000916!3.98e-09!61;UBERON:0000949!1.12e-08!45;UBERON:0000473!3.39e-07!8;UBERON:0001282!6.02e-07!1;UBERON:0009842!6.02e-07!1;UBERON:0003704!6.02e-07!1;UBERON:0001171!6.02e-07!1;UBERON:0001172!6.02e-07!1 | |ontology_enrichment_uberon=UBERON:0002107!6.38e-18!19;UBERON:0006925!6.38e-18!19;UBERON:0008836!6.38e-18!19;UBERON:0005057!4.89e-16!26;UBERON:0008835!2.59e-15!22;UBERON:0003894!2.59e-15!22;UBERON:0009854!1.35e-14!23;UBERON:0007499!2.49e-13!25;UBERON:0009497!2.49e-13!25;UBERON:0000015!2.49e-13!25;UBERON:0002423!2.49e-13!25;UBERON:0006235!2.49e-13!25;UBERON:0004161!2.49e-13!25;UBERON:0002365!3.35e-13!31;UBERON:0002330!3.35e-13!31;UBERON:0009856!9.01e-13!26;UBERON:0005172!2.40e-10!55;UBERON:0005173!2.40e-10!55;UBERON:0002368!3.54e-09!35;UBERON:0002417!3.98e-09!61;UBERON:0000916!3.98e-09!61;UBERON:0000949!1.12e-08!45;UBERON:0000473!3.39e-07!8;UBERON:0001282!6.02e-07!1;UBERON:0009842!6.02e-07!1;UBERON:0003704!6.02e-07!1;UBERON:0001171!6.02e-07!1;UBERON:0001172!6.02e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.17e-17;2!UBERON:0001777;1.17e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0003891;1.63e-09;4!UBERON:0000964;1.63e-09;4!UBERON:0010409;1.63e-09;4!UBERON:0002107;6.48e-08;19!UBERON:0006925;6.48e-08;19!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.07e-17,2;UBERON:0001777,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0003891,1.57e-09,4;UBERON:0000964,1.57e-09,4;UBERON:0010409,1.57e-09,4;UBERON:0004348,1.57e-09,4;UBERON:0005427,1.57e-09,4;UBERON:0002107,6.59e-08,19;UBERON:0006925,6.59e-08,19;UBERON:0008836,6.59e-08,19;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0008835,5.91e-07,22;UBERON:0003894,5.91e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,10.3473469643193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,13.6401656792831,31.8877314885852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,10.3473469643193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,13.6401656792831,31.8877314885852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p2@KIAA1683 | |short_description=p2@KIAA1683 | ||
}} | }} |
Latest revision as of 14:55, 16 September 2015
Short description: | p2@KIAA1683 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIAA1683_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 51bp_to_ENST00000359737, ENST00000392413, ENST00000427634, NM_001145304, NM_001145305, NM_025249, uc002nin.2, uc010ebn.2, uc010xqe.1_5end |
EntrezGene: | KIAA1683 |
HGNC: | 29350 |
UniProt: | Q9H0B3E9PDE0E9PH54Q2KHR5A0JP07B4DYH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.07e-17 | 2 |
migratory cranial neural crest cell | 1.07e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.07e-17 | 2 |
substantia propria of cornea | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
stroma | 1.57e-09 | 4 |
cornea | 1.57e-09 | 4 |
eye surface | 1.57e-09 | 4 |
optic eminence | 1.57e-09 | 4 |
corneal primordium | 1.57e-09 | 4 |
liver | 6.59e-08 | 19 |
digestive gland | 6.59e-08 | 19 |
liver bud | 6.59e-08 | 19 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
hepatic diverticulum | 5.91e-07 | 22 |
liver primordium | 5.91e-07 | 22 |