FFCP PHASE1:Hg19::chr3:132976005..132976010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000505721_5end | |association_with_transcript=21bp_to_ENST00000505721_5end | ||
|cluster_id=chr3:132976005..132976010,- | |||
|coexpression_cluster_id=C1250 | |||
|description=CAGE_peak_2_at_ENST00000505721_5end | |description=CAGE_peak_2_at_ENST00000505721_5end | ||
|id=chr3:132976005..132976010,- | |id=chr3:132976005..132976010,- | ||
|ontology_enrichment_celltype=CL:0000342!7.50e-10!1;CL:0002565!7.50e-10!1;CL:0000077!2.50e-07!19 | |ontology_enrichment_celltype=CL:0000342!7.50e-10!1;CL:0002565!7.50e-10!1;CL:0000077!2.50e-07!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.40e-36;10 | |||
|ontology_enrichment_disease=DOID:0060084!8.05e-27!3;DOID:127!8.05e-27!3;DOID:0060072!2.81e-20!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.33e-118;3!DOID:127;2.33e-118;3!DOID:0060072;4.23e-89;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.33e-118,3;DOID:127,2.33e-118,3;DOID:0060072,4.23e-89,4 | |||
|ontology_enrichment_uberon=UBERON:0001871!3.13e-26!7;UBERON:0002619!3.82e-22!22;UBERON:0000956!1.78e-19!25;UBERON:0000203!1.78e-19!25;UBERON:0001950!9.02e-19!20;UBERON:0001876!2.66e-18!2;UBERON:0000349!7.05e-16!5;UBERON:0001869!3.93e-15!32;UBERON:0002791!1.17e-14!33;UBERON:0002020!3.29e-14!34;UBERON:0003528!3.29e-14!34;UBERON:0001893!3.29e-14!34;UBERON:0000200!3.80e-13!6;UBERON:0002771!2.69e-12!3;UBERON:0003056!6.78e-12!61;UBERON:0002780!1.14e-11!41;UBERON:0001890!1.14e-11!41;UBERON:0006240!1.14e-11!41;UBERON:0003080!2.25e-11!42;UBERON:0000955!3.92e-10!69;UBERON:0006238!3.92e-10!69;UBERON:0002616!6.30e-10!59;UBERON:0002506!7.50e-10!1;UBERON:0001769!7.50e-10!1;UBERON:0003075!8.58e-10!86;UBERON:0007284!8.58e-10!86;UBERON:0003112!1.25e-09!1;UBERON:0000032!1.25e-09!1;UBERON:0005253!1.25e-09!1;UBERON:0003128!1.25e-09!1;UBERON:0002241!1.25e-09!1;UBERON:0001703!1.25e-09!1;UBERON:0004761!1.25e-09!1;UBERON:0009617!1.25e-09!1;UBERON:0002581!1.76e-09!1;UBERON:0000488!2.17e-09!4;UBERON:0002346!2.77e-09!90;UBERON:0000033!5.52e-09!123;UBERON:0000073!1.61e-08!94;UBERON:0001016!1.61e-08!94;UBERON:0000153!1.80e-08!129;UBERON:0007811!1.80e-08!129;UBERON:0001017!2.52e-08!82;UBERON:0001049!3.66e-08!57;UBERON:0005068!3.66e-08!57;UBERON:0006241!3.66e-08!57;UBERON:0007135!3.66e-08!57;UBERON:0005743!7.09e-08!86;UBERON:0001872!1.66e-07!5;UBERON:0002200!2.14e-07!11;UBERON:0006876!2.14e-07!11;UBERON:0002046!2.16e-07!5;UBERON:0004117!2.16e-07!5;UBERON:0007689!2.16e-07!5;UBERON:0007123!2.16e-07!5;UBERON:0003091!2.16e-07!5;UBERON:0004121!5.34e-07!169;UBERON:0000924!8.75e-07!173;UBERON:0006601!8.75e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;1.16e-78;2!UBERON:0000349;2.74e-32;5!UBERON:0001871;2.02e-23;6!UBERON:0000995;8.35e-22;17!UBERON:0003975;1.20e-20;18!UBERON:0002420;1.76e-18;9!UBERON:0007245;1.76e-18;9!UBERON:0010009;1.76e-18;9!UBERON:0010011;1.76e-18;9!UBERON:0000454;1.76e-18;9!UBERON:0004175;7.83e-18;21!UBERON:0003134;8.13e-11;33!UBERON:0000474;1.58e-09;37!UBERON:0001950;1.59e-08;20!UBERON:0002619;7.23e-08;22!UBERON:0003133;1.81e-07;44!UBERON:0000956;4.55e-07;25!UBERON:0000203;4.55e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,1.16e-78,2;UBERON:0000349,2.74e-32,5;UBERON:0001871,2.02e-23,6;UBERON:0002420,1.76e-18,9;UBERON:0007245,1.76e-18,9;UBERON:0010009,1.76e-18,9;UBERON:0010011,1.76e-18,9;UBERON:0000454,1.76e-18,9;UBERON:0000995,7.83e-18,21;UBERON:0005795,4.60e-17,22;UBERON:0003975,4.60e-17,22;UBERON:0004175,3.99e-15,25;UBERON:0003134,1.71e-10,37;UBERON:0000474,1.71e-10,37;UBERON:0003100,1.51e-09,41;UBERON:0001950,1.59e-08,20;UBERON:0003133,2.89e-08,48;UBERON:0002619,7.23e-08,22;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
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|short_description=p2@ENST00000505721 | |short_description=p2@ENST00000505721 | ||
}} | }} |
Latest revision as of 15:56, 29 July 2015
Short description: | p2@ENST00000505721 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000505721_5end |
Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
Association with transcript: | 21bp_to_ENST00000505721_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 1.16e-78 | 2 |
limbic system | 2.74e-32 | 5 |
temporal lobe | 2.02e-23 | 6 |
basal ganglion | 1.76e-18 | 9 |
nuclear complex of neuraxis | 1.76e-18 | 9 |
aggregate regional part of brain | 1.76e-18 | 9 |
collection of basal ganglia | 1.76e-18 | 9 |
cerebral subcortex | 1.76e-18 | 9 |
uterus | 7.83e-18 | 21 |
embryonic uterus | 4.60e-17 | 22 |
internal female genitalia | 4.60e-17 | 22 |
internal genitalia | 3.99e-15 | 25 |
female reproductive organ | 1.71e-10 | 37 |
female reproductive system | 1.71e-10 | 37 |
female organism | 1.51e-09 | 41 |
neocortex | 1.59e-08 | 20 |
reproductive organ | 2.89e-08 | 48 |
regional part of cerebral cortex | 7.23e-08 | 22 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.33e-118 | 3 |
leiomyoma | 2.33e-118 | 3 |
benign neoplasm | 4.23e-89 | 4 |